RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 RPRMQ9NS64 109 aa11.16□□□□□ -0.62
HMGA1P1-201ENST00000415560 CCDC168Q8NDH2 2452 aa11.16□□□□□ -0.62
HMGA1P1-201ENST00000415560 IGKV1OR2-108A0A075B7D4 117 aa11.15□□□□□ -0.62
HMGA1P1-201ENST00000415560 PF4V1P10720 104 aa11.15□□□□□ -0.62
HMGA1P1-201ENST00000415560 TPPP2P59282 170 aa11.15□□□□□ -0.62
HMGA1P1-201ENST00000415560 RHOBP62745 196 aa11.15□□□□□ -0.62
HMGA1P1-201ENST00000415560 C15orf32Q32M92 178 aa11.15□□□□□ -0.62
HMGA1P1-201ENST00000415560 Q6ZS46 218 aa11.15□□□□□ -0.62
HMGA1P1-201ENST00000415560 S100A7AQ86SG5 101 aa11.15□□□□□ -0.62
HMGA1P1-201ENST00000415560 COMMD1Q8N668 190 aa11.15□□□□□ -0.62
HMGA1P1-201ENST00000415560 DUX5Q96PT3 197 aa11.15□□□□□ -0.62
HMGA1P1-201ENST00000415560 PFDN5Q99471 154 aa11.15□□□□□ -0.62
HMGA1P1-201ENST00000415560 HRH4Q9H3N8 390 aa11.15□□□□□ -0.62
HMGA1P1-201ENST00000415560 VSIRQ9H7M9 311 aa11.15□□□□□ -0.62
HMGA1P1-201ENST00000415560 ZNF702PQ9H963 129 aa11.15□□□□□ -0.62
HMGA1P1-201ENST00000415560 MRPL36Q9P0J6 103 aaKnown RBP11.15□□□□□ -0.62
HMGA1P1-201ENST00000415560 IGKV1D-37A0A075B6S9 117 aa11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 CTXND1A0A1B0GTU2 59 aa11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 NUPL2O15504 423 aaKnown RBP11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 RNASE1P07998 156 aaKnown RBP11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 LINC00869P0C866 280 aa11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 IGLC1P0CG04 106 aa11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 HILS1P60008 231 aa11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 YPEL3P61236 119 aaPredicted RBP11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 FAM209BQ5JX69 171 aa11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 FAM122CQ6P4D5 195 aa11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 Q8N2B8 174 aa11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 Q8WTZ3 238 aa11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 GATAD1Q8WUU5 269 aa11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 SFT2D1Q8WV19 159 aa11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 MBD3L1Q8WWY6 194 aa11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 NAV3Q8IVL0 2385 aa11.14□□□□□ -0.63
HMGA1P1-201ENST00000415560 ELOA3CA0A087WX78 387 aaPredicted RBP11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 PSMB11A5LHX3 300 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 FAM181BA6NEQ2 426 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 MFSD2BA6NFX1 497 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 IGLV1-40P01703 118 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 RD3LP0DJH9 198 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 S100A7P31151 101 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 CDC34P49427 236 aaPredicted RBP11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 FHITP49789 147 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 RAB9AP51151 201 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 ZNF90Q03938 601 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 TIGITQ495A1 244 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 TEX38Q6PEX7 206 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 IL34Q6ZMJ4 242 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 LYPD6BQ8NI32 183 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 ZNF502Q8TBZ5 544 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 MARC2Q969Z3 335 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 DNAJC4Q9NNZ3 241 aa11.13□□□□□ -0.63
HMGA1P1-201ENST00000415560 FLNAP21333 2647 aaKnown RBP11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 TRAV1-1A0A0B4J248 108 aa11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 INAFM1C9JVW0 142 aa11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 COX7A2P2O60397 106 aa11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 YIF1AO95070 293 aa11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 TOMM40O96008 361 aa11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 IGHG4P01861 327 aa11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 CLEC3BP05452 202 aa11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 ELANEP08246 267 aa11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 GATA2P23769 480 aaPredicted RBP11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 CFHR3Q02985 330 aa11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 SPSB3Q6PJ21 355 aa11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 Q71RC1 249 aaPredicted RBP11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 COMMD7Q86VX2 200 aa11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 RPP25LQ8N5L8 163 aaKnown RBP11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 OR51G1Q8NGK1 321 aa11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 RCC1LQ96I51 464 aaKnown RBP11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 GSX1Q9H4S2 264 aaPredicted RBP11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 S4R3C0 116 aa11.12□□□□□ -0.63
HMGA1P1-201ENST00000415560 RAB19A4D1S5 217 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 MAP1LC3B2A6NCE7 125 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 SEC14L6B5MCN3 397 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 HYPMO75409 117 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 IGHV3-23P01764 117 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 OR5G3P0C626 314 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 PSG1P11464 419 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 TAS2R45P59539 299 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 PLP1P60201 277 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 FAM78BQ5VT40 261 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 C10orf113Q5VZT2 155 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 LCN15Q6UWW0 184 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 SLC7A5P1Q8MH63 180 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 RAB24Q969Q5 203 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 PBDC1Q9BVG4 233 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 MRPL32Q9BYC8 188 aaKnown RBP11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 MAP1LC3BQ9GZQ8 125 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 ESM1Q9NQ30 184 aa11.11□□□□□ -0.63
HMGA1P1-201ENST00000415560 OR2T8A6NH00 312 aa11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 TCF21O43680 179 aa11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 CRLF1O75462 422 aa11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 IFNA1P01562 189 aa11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 ORM2P19652 201 aa11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 PPT1P50897 306 aa11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 RELQ04864 619 aaPredicted RBP11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 FOXE3Q13461 319 aa11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 TMEM95Q3KNT9 176 aa11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 CLEC19AQ6UXS0 136 aa11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 ZNF600Q6ZNG1 722 aa11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 Q6ZSV7 163 aa11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 OR1B1Q8NGR6 318 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms