RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 SHANK1Q9Y566 2161 aa8.92□□□□□ -0.98
SCN5A-204ENST00000414099 FUT5Q11128 374 aa8.92□□□□□ -0.98
SCN5A-204ENST00000414099 OSTCQ9NRP0 149 aa8.92□□□□□ -0.98
SCN5A-204ENST00000414099 SCO2A0A1W2PP80 73 aa8.92□□□□□ -0.98
SCN5A-204ENST00000414099 SEPSECSQ9HD40 501 aaKnown RBP8.92□□□□□ -0.98
SCN5A-204ENST00000414099 RNF114Q9Y508 228 aa8.92□□□□□ -0.98
SCN5A-204ENST00000414099 SAA1P0DJI8 122 aaPredicted RBP8.92□□□□□ -0.98
SCN5A-204ENST00000414099 IGFBP2P18065 325 aa8.92□□□□□ -0.98
SCN5A-204ENST00000414099 UCP1P25874 307 aa8.92□□□□□ -0.98
SCN5A-204ENST00000414099 CCL20P78556 96 aa8.92□□□□□ -0.98
SCN5A-204ENST00000414099 GAGE2EQ4V326 116 aa8.92□□□□□ -0.98
SCN5A-204ENST00000414099 GAGE2DQ9UEU5 116 aa8.92□□□□□ -0.98
SCN5A-204ENST00000414099 SNRPCP09234 159 aaKnown RBP8.92□□□□□ -0.98
SCN5A-204ENST00000414099 HSD52Q0P140 79 aa8.92□□□□□ -0.98
SCN5A-204ENST00000414099 KIAA1671Q9BY89 1806 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 A0A1W2PRX2 142 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 EML6Q6ZMW3 1958 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 COL4A5P29400 1685 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 TRAV14DV4A0A0A6YYC5 116 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 OOSP1A8MZH6 123 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 MINOS1Q5TGZ0 78 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 TMEM144Q7Z5S9 345 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 SPRED2Q7Z698 418 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 MINOS1-NBL1R4GNA1 71 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 CEP192Q8TEP8 1941 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 ZFAND6Q6FIF0 208 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 ERG28Q9UKR5 140 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 PKDREJQ9NTG1 2253 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 ZP1P60852 638 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 ZXDCQ2QGD7 858 aaPredicted RBP8.91□□□□□ -0.98
SCN5A-204ENST00000414099 RFLNBQ8N5W9 214 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 MESP2Q0VG99 397 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 RFPL3SP0C7P2 107 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 RPL39P5Q59GN2 51 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 WNT10AQ9GZT5 417 aa8.91□□□□□ -0.98
SCN5A-204ENST00000414099 VWC2LB2RUY7 222 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 LAGE3Q14657 143 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 TMEM105Q8N8V8 129 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 TMEM170AQ8WVE7 144 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 PLXNB3Q9ULL4 1909 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 MSGN1A6NI15 193 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 FOXL2P58012 376 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 HTN3P15516 51 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 C1QTNF4Q9BXJ3 329 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 JPT2Q9H910 190 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 RASL10AQ92737 203 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 C14orf144Q96I85 54 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 IGKV1D-42A0A075B6H8 117 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 C15orf61A6NNL5 157 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 SRP19P09132 144 aaKnown RBP8.9□□□□□ -0.98
SCN5A-204ENST00000414099 DMRTA1Q5VZB9 504 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 ORAOV1Q8WV07 137 aa8.9□□□□□ -0.98
SCN5A-204ENST00000414099 TRAV9-2A0A087WT02 112 aa8.9□□□□□ -0.99
SCN5A-204ENST00000414099 LINC00271P0C7V0 271 aa8.9□□□□□ -0.99
SCN5A-204ENST00000414099 PSG7Q13046 419 aa8.9□□□□□ -0.99
SCN5A-204ENST00000414099 LINC00614P0C842 121 aa8.9□□□□□ -0.99
SCN5A-204ENST00000414099 PROB1E7EW31 1015 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 H2BFSP57053 126 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 CD300CQ08708 224 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 OR10W1Q8NGF6 305 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 GTF3AQ92664 365 aaKnown RBP8.89□□□□□ -0.99
SCN5A-204ENST00000414099 IGLV3-32A0A0A0MS00 114 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 A0A1W2PRE2 83 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 B4DSR2 109 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 EFNA4P52798 201 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 ZNF415Q09FC8 603 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 MRPL14Q6P1L8 145 aaKnown RBP8.89□□□□□ -0.99
SCN5A-204ENST00000414099 C9orf106Q8NAJ2 232 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 KLF12Q9Y4X4 402 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 GATA3P23771 443 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 SRSF7Q16629 238 aaKnown RBP eCLIP8.89□□□□□ -0.99
SCN5A-204ENST00000414099 TRAV2A0A0B4J234 112 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 IGHV3-23P01764 117 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 CD33P20138 364 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 FOXA3P55318 350 aaPredicted RBP8.89□□□□□ -0.99
SCN5A-204ENST00000414099 LAMTOR2Q9Y2Q5 125 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 H3BTX0 84 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 EPDR1Q9UM22 224 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 TRAV12-3A0A0B4J271 114 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 LINC00158P58513 81 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 SIGLEC15Q6ZMC9 328 aa8.89□□□□□ -0.99
SCN5A-204ENST00000414099 IGHV3-66A0A0C4DH42 116 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 ZNHIT1O43257 154 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 TFF3Q07654 80 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 GAGE13Q4V321 117 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 RNF125Q96EQ8 232 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 SSBP2P81877 361 aaPredicted RBP8.88□□□□□ -0.99
SCN5A-204ENST00000414099 ZFP36L1Q07352 338 aaKnown RBP8.88□□□□□ -0.99
SCN5A-204ENST00000414099 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.88□□□□□ -0.99
SCN5A-204ENST00000414099 C12orf77C9JDV5 145 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 NDUFS8O00217 210 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 DMRTA2Q96SC8 542 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 C18orf12Q96KH6 178 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 TRBV7-1A0A0A6YYK4 115 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 A0A0G2JK05 382 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 H3BUT2 72 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 LEPROTO15243 131 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 IFITM2Q01629 132 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 SPSB3Q6PJ21 355 aa8.88□□□□□ -0.99
SCN5A-204ENST00000414099 AMELYQ99218 206 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms