RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 OR4C46A6NHA9 309 aa11.03□□□□□ -0.64
LIMS4-201ENST00000413601 PLA2G10O15496 165 aa11.03□□□□□ -0.64
LIMS4-201ENST00000413601 IGLC1P0CG04 106 aa11.03□□□□□ -0.64
LIMS4-201ENST00000413601 OR10J1P30954 320 aa11.03□□□□□ -0.64
LIMS4-201ENST00000413601 TFPI2P48307 235 aa11.03□□□□□ -0.64
LIMS4-201ENST00000413601 GGNBP1Q5YKI7 109 aa11.03□□□□□ -0.64
LIMS4-201ENST00000413601 FAM90A2PQ658T7 463 aa11.03□□□□□ -0.64
LIMS4-201ENST00000413601 TCF24Q7RTU0 167 aa11.03□□□□□ -0.64
LIMS4-201ENST00000413601 LILRB2Q8N423 598 aa11.03□□□□□ -0.64
LIMS4-201ENST00000413601 OR1S2Q8NGQ3 325 aa11.03□□□□□ -0.64
LIMS4-201ENST00000413601 NPIPB3Q92617 1050 aa11.03□□□□□ -0.64
LIMS4-201ENST00000413601 ACY3Q96HD9 319 aa11.03□□□□□ -0.64
LIMS4-201ENST00000413601 VSIRQ9H7M9 311 aa11.03□□□□□ -0.64
LIMS4-201ENST00000413601 ADAP1O75689 374 aa11.02□□□□□ -0.65
LIMS4-201ENST00000413601 IFNA4P05014 189 aa11.02□□□□□ -0.65
LIMS4-201ENST00000413601 OR4E1P0C645 316 aa11.02□□□□□ -0.65
LIMS4-201ENST00000413601 IAPPP10997 89 aa11.02□□□□□ -0.65
LIMS4-201ENST00000413601 ANXA7P20073 488 aaKnown RBP11.02□□□□□ -0.65
LIMS4-201ENST00000413601 NPPCP23582 126 aa11.02□□□□□ -0.65
LIMS4-201ENST00000413601 DHRS2Q13268 280 aa11.02□□□□□ -0.65
LIMS4-201ENST00000413601 ODF3L2Q3SX64 289 aa11.02□□□□□ -0.65
LIMS4-201ENST00000413601 LYG2Q86SG7 212 aa11.02□□□□□ -0.65
LIMS4-201ENST00000413601 GBGT1Q8N5D6 347 aa11.02□□□□□ -0.65
LIMS4-201ENST00000413601 FAM110AQ9BQ89 295 aa11.02□□□□□ -0.65
LIMS4-201ENST00000413601 MAGT1Q9H0U3 335 aa11.02□□□□□ -0.65
LIMS4-201ENST00000413601 LOC102724200A0A096LPH7 203 aaPredicted RBP11.01□□□□□ -0.65
LIMS4-201ENST00000413601 FAM90A26D6RGX4 464 aa11.01□□□□□ -0.65
LIMS4-201ENST00000413601 LYRM1O43325 122 aa11.01□□□□□ -0.65
LIMS4-201ENST00000413601 DFFBO76075 338 aa11.01□□□□□ -0.65
LIMS4-201ENST00000413601 BMI1P35226 326 aa11.01□□□□□ -0.65
LIMS4-201ENST00000413601 ATP5IP56385 69 aaPredicted RBP11.01□□□□□ -0.65
LIMS4-201ENST00000413601 YPEL3P61236 119 aaPredicted RBP11.01□□□□□ -0.65
LIMS4-201ENST00000413601 C4orf46Q504U0 113 aa11.01□□□□□ -0.65
LIMS4-201ENST00000413601 DMRTA1Q5VZB9 504 aa11.01□□□□□ -0.65
LIMS4-201ENST00000413601 METTL26Q96S19 204 aa11.01□□□□□ -0.65
LIMS4-201ENST00000413601 GGTLC1Q9BX51 225 aa11.01□□□□□ -0.65
LIMS4-201ENST00000413601 STAB2Q8WWQ8 2551 aa11.01□□□□□ -0.65
LIMS4-201ENST00000413601 A6NHS1 94 aa11□□□□□ -0.65
LIMS4-201ENST00000413601 MPTX1A8MV57 137 aa11□□□□□ -0.65
LIMS4-201ENST00000413601 SYNGR2O43760 224 aa11□□□□□ -0.65
LIMS4-201ENST00000413601 MED6O75586 246 aa11□□□□□ -0.65
LIMS4-201ENST00000413601 CRYBB3P26998 211 aa11□□□□□ -0.65
LIMS4-201ENST00000413601 RPL11P62913 178 aaKnown RBP11□□□□□ -0.65
LIMS4-201ENST00000413601 CNPY1Q3B7I2 92 aa11□□□□□ -0.65
LIMS4-201ENST00000413601 WFDC3Q8IUB2 231 aa11□□□□□ -0.65
LIMS4-201ENST00000413601 APRG1Q8IVJ8 170 aa11□□□□□ -0.65
LIMS4-201ENST00000413601 COQ8AQ8NI60 647 aa11□□□□□ -0.65
LIMS4-201ENST00000413601 MUC7Q8TAX7 377 aa11□□□□□ -0.65
LIMS4-201ENST00000413601 Q8WTZ3 238 aa11□□□□□ -0.65
LIMS4-201ENST00000413601 TMEM231Q9H6L2 316 aa11□□□□□ -0.65
LIMS4-201ENST00000413601 EDA2RQ9HAV5 297 aa11□□□□□ -0.65
LIMS4-201ENST00000413601 PAIP2BQ9ULR5 123 aaKnown RBP11□□□□□ -0.65
LIMS4-201ENST00000413601 A0A1W2PS18 150 aa10.99□□□□□ -0.65
LIMS4-201ENST00000413601 C3orf84H3BNL1 204 aa10.99□□□□□ -0.65
LIMS4-201ENST00000413601 WRBO00258 174 aa10.99□□□□□ -0.65
LIMS4-201ENST00000413601 CD5P06127 495 aa10.99□□□□□ -0.65
LIMS4-201ENST00000413601 GPX4P36969 197 aaPredicted RBP10.99□□□□□ -0.65
LIMS4-201ENST00000413601 RAB11AP62491 216 aa10.99□□□□□ -0.65
LIMS4-201ENST00000413601 PAFAH1B2P68402 229 aa10.99□□□□□ -0.65
LIMS4-201ENST00000413601 GAMTQ14353 236 aa10.99□□□□□ -0.65
LIMS4-201ENST00000413601 C20orf85Q9H1P6 137 aa10.99□□□□□ -0.65
LIMS4-201ENST00000413601 MS4A6AQ9H2W1 248 aa10.99□□□□□ -0.65
LIMS4-201ENST00000413601 NBEAL2Q6ZNJ1 2754 aa10.98□□□□□ -0.65
LIMS4-201ENST00000413601 DNASE2O00115 360 aaPredicted RBP10.98□□□□□ -0.65
LIMS4-201ENST00000413601 TOMM40O96008 361 aa10.98□□□□□ -0.65
LIMS4-201ENST00000413601 IFNA21P01568 189 aa10.98□□□□□ -0.65
LIMS4-201ENST00000413601 IL4P05112 153 aa10.98□□□□□ -0.65
LIMS4-201ENST00000413601 RD3LP0DJH9 198 aa10.98□□□□□ -0.65
LIMS4-201ENST00000413601 PSG1P11464 419 aa10.98□□□□□ -0.65
LIMS4-201ENST00000413601 P2RY1P47900 373 aa10.98□□□□□ -0.65
LIMS4-201ENST00000413601 ZNF124Q15973 351 aa10.98□□□□□ -0.65
LIMS4-201ENST00000413601 NARS2Q96I59 477 aaKnown RBP10.98□□□□□ -0.65
LIMS4-201ENST00000413601 SLC35E1Q96K37 410 aa10.98□□□□□ -0.65
LIMS4-201ENST00000413601 CIB3Q96Q77 187 aaPredicted RBP10.98□□□□□ -0.65
LIMS4-201ENST00000413601 CCDC32Q9BV29 185 aa10.98□□□□□ -0.65
LIMS4-201ENST00000413601 TRAV6A0A075B6T7 132 aa10.97□□□□□ -0.65
LIMS4-201ENST00000413601 TCRBP04435 133 aa10.97□□□□□ -0.65
LIMS4-201ENST00000413601 RPL35AP18077 110 aaKnown RBP10.97□□□□□ -0.65
LIMS4-201ENST00000413601 CMC4P56277 68 aaPredicted RBP10.97□□□□□ -0.65
LIMS4-201ENST00000413601 ID3Q02535 119 aa10.97□□□□□ -0.65
LIMS4-201ENST00000413601 USF2Q15853 346 aaPredicted RBP10.97□□□□□ -0.65
LIMS4-201ENST00000413601 LINC00299Q6ZSB3 139 aa10.97□□□□□ -0.65
LIMS4-201ENST00000413601 S100ZQ8WXG8 99 aa10.97□□□□□ -0.65
LIMS4-201ENST00000413601 MAP6D1Q9H9H5 199 aa10.97□□□□□ -0.65
LIMS4-201ENST00000413601 RABAC1Q9UI14 185 aa10.97□□□□□ -0.65
LIMS4-201ENST00000413601 U3KQE9 123 aa10.97□□□□□ -0.65
LIMS4-201ENST00000413601 IGKV1D-37A0A075B6S9 117 aa10.96□□□□□ -0.65
LIMS4-201ENST00000413601 ZFP92A6NM28 416 aa10.96□□□□□ -0.65
LIMS4-201ENST00000413601 H3BP45 60 aa10.96□□□□□ -0.65
LIMS4-201ENST00000413601 HNRNPCP07910 306 aaKnown RBP eCLIP10.96□□□□□ -0.65
LIMS4-201ENST00000413601 LYL1P12980 280 aa10.96□□□□□ -0.65
LIMS4-201ENST00000413601 APOC4P55056 127 aa10.96□□□□□ -0.65
LIMS4-201ENST00000413601 POLR2GP62487 172 aaKnown RBP eCLIP10.96□□□□□ -0.65
LIMS4-201ENST00000413601 RPP30P78346 268 aaKnown RBP10.96□□□□□ -0.65
LIMS4-201ENST00000413601 ZNF90Q03938 601 aa10.96□□□□□ -0.65
LIMS4-201ENST00000413601 SPANXN5Q5MJ07 72 aa10.96□□□□□ -0.65
LIMS4-201ENST00000413601 FAM24BQ8N5W8 94 aa10.96□□□□□ -0.65
LIMS4-201ENST00000413601 STXBP6Q8NFX7 210 aa10.96□□□□□ -0.65
LIMS4-201ENST00000413601 OR4D5Q8NGN0 318 aa10.96□□□□□ -0.65
LIMS4-201ENST00000413601 MITD1Q8WV92 249 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms