RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 NEDD8Q15843 81 aa8.66□□□□□ -1.02
LIMS2-210ENST00000413578 USF2Q15853 346 aaPredicted RBP8.66□□□□□ -1.02
LIMS2-210ENST00000413578 PRSS54Q6PEW0 395 aa8.66□□□□□ -1.02
LIMS2-210ENST00000413578 NARS2Q96I59 477 aaKnown RBP8.66□□□□□ -1.02
LIMS2-210ENST00000413578 NRN1Q9NPD7 142 aa8.66□□□□□ -1.02
LIMS2-210ENST00000413578 HLA-DRB4X5D2U9 266 aa8.66□□□□□ -1.02
LIMS2-210ENST00000413578 HERC1Q15751 4861 aa8.66□□□□□ -1.02
LIMS2-210ENST00000413578 TMEM189A5PLL7 270 aa8.65□□□□□ -1.02
LIMS2-210ENST00000413578 BUB3O43684 328 aa8.65□□□□□ -1.02
LIMS2-210ENST00000413578 SCGB2A1O75556 95 aa8.65□□□□□ -1.02
LIMS2-210ENST00000413578 SPART-AS1P0CW21 52 aa8.65□□□□□ -1.02
LIMS2-210ENST00000413578 PI3P19957 117 aa8.65□□□□□ -1.02
LIMS2-210ENST00000413578 PIGPP57054 158 aa8.65□□□□□ -1.02
LIMS2-210ENST00000413578 SNRPD3P62318 126 aaKnown RBP8.65□□□□□ -1.02
LIMS2-210ENST00000413578 OR1S2Q8NGQ3 325 aa8.65□□□□□ -1.02
LIMS2-210ENST00000413578 TMEM170AQ8WVE7 144 aa8.65□□□□□ -1.02
LIMS2-210ENST00000413578 DKK2Q9UBU2 259 aa8.65□□□□□ -1.02
LIMS2-210ENST00000413578 IGLV2-18A0A075B6J9 118 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 C3orf85A0A1B0GTC6 90 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 SMIM9A6NGZ8 99 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 M0QYG6 137 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 ATG12O94817 140 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 NXPH3O95157 252 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 IFNA10P01566 189 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 UCP1P25874 307 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 NKX2-1P43699 371 aaPredicted RBP8.64□□□□□ -1.03
LIMS2-210ENST00000413578 RND2P52198 227 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 DHODHQ02127 395 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 RNF212Q495C1 297 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 GDF5OSQ5U4N7 250 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 SNX29P2Q8IUI4 249 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 ZNF709Q8N972 641 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 OR52E5Q8NH55 327 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 Q8WTZ3 238 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 YIPF6Q96EC8 236 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 PDCD10Q9BUL8 212 aa8.64□□□□□ -1.03
LIMS2-210ENST00000413578 TEX48A0A1B0GUV7 120 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 RPS10-NUDT3A0A1W2PQS6 291 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 IFNA21P01568 189 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 APOA1P02647 267 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 IL4P05112 153 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 SLC25A4P12235 298 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 PGAM2P15259 253 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 OR10J1P30954 320 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 HTR2BP41595 481 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 SPCS3P61009 180 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 OXA1LQ15070 435 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 SP6Q3SY56 376 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 C2orf83Q53S99 150 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 SIGLEC15Q6ZMC9 328 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 ARRDC1Q8N5I2 433 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 CLUHP3Q96NS8 147 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 Q9H521 79 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 ENY2Q9NPA8 101 aa8.63□□□□□ -1.03
LIMS2-210ENST00000413578 TOMM40O96008 361 aa8.62□□□□□ -1.03
LIMS2-210ENST00000413578 DEFB1P60022 68 aa8.62□□□□□ -1.03
LIMS2-210ENST00000413578 FAM222AQ5U5X8 452 aa8.62□□□□□ -1.03
LIMS2-210ENST00000413578 FAM219AQ8IW50 185 aa8.62□□□□□ -1.03
LIMS2-210ENST00000413578 UBE2DNLQ8IWF7 75 aa8.62□□□□□ -1.03
LIMS2-210ENST00000413578 RNASEH2CQ8TDP1 164 aaKnown RBP8.62□□□□□ -1.03
LIMS2-210ENST00000413578 RRNAD1Q96FB5 475 aaKnown RBP8.62□□□□□ -1.03
LIMS2-210ENST00000413578 COMMD3Q9UBI1 195 aa8.62□□□□□ -1.03
LIMS2-210ENST00000413578 RFNGQ9Y644 331 aa8.62□□□□□ -1.03
LIMS2-210ENST00000413578 SMIM31A0A1B0GVY4 71 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 SOCS3O14543 225 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 B3GALNT1O75752 331 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 CDK2AP2O75956 126 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 CDS2O95674 445 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 CD3DP04234 171 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 ELK1P19419 428 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 EMP1P54849 157 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 LSM3P62310 102 aaKnown RBP8.61□□□□□ -1.03
LIMS2-210ENST00000413578 TRIM16LQ309B1 348 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 SOHLH1Q5JUK2 328 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 C1orf134Q5TEV5 83 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 FOXI2Q6ZQN5 318 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 LHFPL5Q8TAF8 219 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 NIPSNAP3BQ9BS92 247 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 TMEM222Q9H0R3 208 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 SAV1Q9H4B6 383 aaPredicted RBP8.61□□□□□ -1.03
LIMS2-210ENST00000413578 PLA2G2EQ9NZK7 142 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 KLK11Q9UBX7 282 aa8.61□□□□□ -1.03
LIMS2-210ENST00000413578 GSTZ1O43708 216 aaPredicted RBP8.6□□□□□ -1.03
LIMS2-210ENST00000413578 PSG1P11464 419 aa8.6□□□□□ -1.03
LIMS2-210ENST00000413578 TBPP20226 339 aa8.6□□□□□ -1.03
LIMS2-210ENST00000413578 ZNF79Q15937 498 aa8.6□□□□□ -1.03
LIMS2-210ENST00000413578 RNASE10Q5GAN6 216 aaKnown RBP8.6□□□□□ -1.03
LIMS2-210ENST00000413578 C1orf158Q8N1D5 194 aa8.6□□□□□ -1.03
LIMS2-210ENST00000413578 SLC24A4Q8NFF2 622 aa8.6□□□□□ -1.03
LIMS2-210ENST00000413578 OR4D10Q8NGI6 311 aa8.6□□□□□ -1.03
LIMS2-210ENST00000413578 OR13C8Q8NGS7 320 aa8.6□□□□□ -1.03
LIMS2-210ENST00000413578 GLYATL2Q8WU03 294 aa8.6□□□□□ -1.03
LIMS2-210ENST00000413578 NPIPB3Q92617 1050 aa8.6□□□□□ -1.03
LIMS2-210ENST00000413578 WDR12Q9GZL7 423 aaKnown RBP8.6□□□□□ -1.03
LIMS2-210ENST00000413578 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.6□□□□□ -1.03
LIMS2-210ENST00000413578 COPZ2Q9P299 210 aa8.6□□□□□ -1.03
LIMS2-210ENST00000413578 HPGDSO60760 199 aa8.59□□□□□ -1.03
LIMS2-210ENST00000413578 ATP6V1G2O95670 118 aa8.59□□□□□ -1.03
LIMS2-210ENST00000413578 RD3LP0DJH9 198 aa8.59□□□□□ -1.03
LIMS2-210ENST00000413578 PAX9P55771 341 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms