RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 CXorf1O96002 111 aa13.57□□□□□ -0.24
PTPRC-206ENST00000413409 LINC00869P0C866 280 aa13.57□□□□□ -0.24
PTPRC-206ENST00000413409 CEBPGP53567 150 aa13.57□□□□□ -0.24
PTPRC-206ENST00000413409 AKIRIN2Q53H80 203 aa13.57□□□□□ -0.24
PTPRC-206ENST00000413409 CCDC144NLQ6NUI1 221 aa13.57□□□□□ -0.24
PTPRC-206ENST00000413409 PPP1R27Q86WC6 154 aa13.57□□□□□ -0.24
PTPRC-206ENST00000413409 C20orf24Q9BUV8 137 aa13.57□□□□□ -0.24
PTPRC-206ENST00000413409 TMPRSS5Q9H3S3 457 aa13.57□□□□□ -0.24
PTPRC-206ENST00000413409 ARL2-SNX15V9GYD0 113 aa13.57□□□□□ -0.24
PTPRC-206ENST00000413409 TNCP24821 2201 aa13.56□□□□□ -0.24
PTPRC-206ENST00000413409 IGHV2-70DA0A0C4DH43 119 aa13.56□□□□□ -0.24
PTPRC-206ENST00000413409 COLCA2A8K830 154 aa13.56□□□□□ -0.24
PTPRC-206ENST00000413409 EIF3GO75821 320 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTPRC-206ENST00000413409 MT-CO2P00403 227 aa13.56□□□□□ -0.24
PTPRC-206ENST00000413409 FOLR2P14207 255 aa13.56□□□□□ -0.24
PTPRC-206ENST00000413409 CNTFRP26992 372 aa13.56□□□□□ -0.24
PTPRC-206ENST00000413409 PRB3Q04118 309 aaPredicted RBP13.56□□□□□ -0.24
PTPRC-206ENST00000413409 TNXAQ16473 311 aa13.56□□□□□ -0.24
PTPRC-206ENST00000413409 LDLRAD2Q5SZI1 272 aa13.56□□□□□ -0.24
PTPRC-206ENST00000413409 THAP8Q8NA92 274 aa13.56□□□□□ -0.24
PTPRC-206ENST00000413409 SIRPDQ9H106 197 aa13.56□□□□□ -0.24
PTPRC-206ENST00000413409 ARHGAP32A7KAX9 2087 aa13.56□□□□□ -0.24
PTPRC-206ENST00000413409 IGKV1OR2-108A0A075B7D4 117 aa13.55□□□□□ -0.24
PTPRC-206ENST00000413409 CORTO00230 105 aa13.55□□□□□ -0.24
PTPRC-206ENST00000413409 DEFA4P12838 97 aa13.55□□□□□ -0.24
PTPRC-206ENST00000413409 OR10J1P30954 320 aa13.55□□□□□ -0.24
PTPRC-206ENST00000413409 FLI1Q01543 452 aaPredicted RBP13.55□□□□□ -0.24
PTPRC-206ENST00000413409 KLRD1Q13241 179 aa13.55□□□□□ -0.24
PTPRC-206ENST00000413409 ETFRF1Q6IPR1 90 aa13.55□□□□□ -0.24
PTPRC-206ENST00000413409 CYP2G1PQ6ZSU1 146 aa13.55□□□□□ -0.24
PTPRC-206ENST00000413409 VMO1Q7Z5L0 202 aa13.55□□□□□ -0.24
PTPRC-206ENST00000413409 IQCF2Q8IXL9 164 aa13.55□□□□□ -0.24
PTPRC-206ENST00000413409 RNF2Q99496 336 aa13.55□□□□□ -0.24
PTPRC-206ENST00000413409 TENM3Q9P273 2699 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 TEX22C9J3V5 150 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 F6UZH7 168 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 PDE6DO43924 150 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 PAGE4O60829 102 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 NDUFA3O95167 84 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 MT-ND4LP03901 98 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 CRYGCP07315 174 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 OR5G3P0C626 314 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 ARL14EPLP0DKL9 152 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 AKR1C3P42330 323 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 NPBQ8NG41 125 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 OR1P1Q8NH06 330 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 NAT8Q9UHE5 227 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 FUT9Q9Y231 359 aa13.54□□□□□ -0.24
PTPRC-206ENST00000413409 TBL2Q9Y4P3 447 aaKnown RBP13.54□□□□□ -0.24
PTPRC-206ENST00000413409 BIRC6Q9NR09 4857 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 CXorf65A6NEN9 183 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 ZNF727A8MUV8 499 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 C11orf94C9JXX5 98 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 J3QLI3 93 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 NBR2O15453 112 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 MOSP00540 346 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 RNASE1P07998 156 aaKnown RBP13.53□□□□□ -0.24
PTPRC-206ENST00000413409 GCHFRP30047 84 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 BCL6BQ8N143 479 aaPredicted RBP13.53□□□□□ -0.24
PTPRC-206ENST00000413409 OR4F5Q8NH21 305 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 ABHD5Q8WTS1 349 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 GATAD1Q8WUU5 269 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 HIST1H2BAQ96A08 127 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 ZNF48Q96MX3 618 aaPredicted RBP13.53□□□□□ -0.24
PTPRC-206ENST00000413409 OR4F4Q96R69 305 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 SMIM7Q9BQ49 75 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 MRPL32Q9BYC8 188 aaKnown RBP13.53□□□□□ -0.24
PTPRC-206ENST00000413409 FBXL15Q9H469 300 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 FNDC4Q9H6D8 234 aaPredicted RBP13.53□□□□□ -0.24
PTPRC-206ENST00000413409 SDF2L1Q9HCN8 221 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 PRELID1Q9Y255 219 aa13.53□□□□□ -0.24
PTPRC-206ENST00000413409 POLR3KQ9Y2Y1 108 aaPredicted RBP13.53□□□□□ -0.24
PTPRC-206ENST00000413409 FOXH1O75593 365 aa13.52□□□□□ -0.25
PTPRC-206ENST00000413409 SELENOTP62341 195 aa13.52□□□□□ -0.25
PTPRC-206ENST00000413409 SSBP2P81877 361 aaPredicted RBP13.52□□□□□ -0.25
PTPRC-206ENST00000413409 RNF212Q495C1 297 aa13.52□□□□□ -0.25
PTPRC-206ENST00000413409 WFDC12Q8WWY7 111 aa13.52□□□□□ -0.25
PTPRC-206ENST00000413409 SRSF12Q8WXF0 261 aaKnown RBP13.52□□□□□ -0.25
PTPRC-206ENST00000413409 YPEL4Q96NS1 127 aa13.52□□□□□ -0.25
PTPRC-206ENST00000413409 C7orf69Q9H7B7 122 aa13.52□□□□□ -0.25
PTPRC-206ENST00000413409 F11RQ9Y624 299 aaKnown RBP13.52□□□□□ -0.25
PTPRC-206ENST00000413409 TCRBV4S1A1TA0A5B7 111 aa13.51□□□□□ -0.25
PTPRC-206ENST00000413409 CLN5O75503 358 aa13.51□□□□□ -0.25
PTPRC-206ENST00000413409 OR2C1O95371 312 aa13.51□□□□□ -0.25
PTPRC-206ENST00000413409 TAS2R45P59539 299 aa13.51□□□□□ -0.25
PTPRC-206ENST00000413409 MMDQ15546 238 aa13.51□□□□□ -0.25
PTPRC-206ENST00000413409 OR2T10Q8NGZ9 312 aa13.51□□□□□ -0.25
PTPRC-206ENST00000413409 ACY3Q96HD9 319 aa13.51□□□□□ -0.25
PTPRC-206ENST00000413409 PARLQ9H300 379 aa13.51□□□□□ -0.25
PTPRC-206ENST00000413409 TMEM167BQ9NRX6 74 aa13.51□□□□□ -0.25
PTPRC-206ENST00000413409 TMEM242Q9NWH2 141 aa13.51□□□□□ -0.25
PTPRC-206ENST00000413409 TECRQ9NZ01 308 aaKnown RBP13.51□□□□□ -0.25
PTPRC-206ENST00000413409 PSMB11A5LHX3 300 aa13.5□□□□□ -0.25
PTPRC-206ENST00000413409 AREGP15514 252 aa13.5□□□□□ -0.25
PTPRC-206ENST00000413409 GNB1P62873 340 aa13.5□□□□□ -0.25
PTPRC-206ENST00000413409 LCN2P80188 198 aa13.5□□□□□ -0.25
PTPRC-206ENST00000413409 EBI3Q14213 229 aa13.5□□□□□ -0.25
PTPRC-206ENST00000413409 PLGLAQ15195 96 aa13.5□□□□□ -0.25
PTPRC-206ENST00000413409 SPATA31B1PQ5VZV4 182 aa13.5□□□□□ -0.25
PTPRC-206ENST00000413409 PQLC2Q6ZP29 291 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms