RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 Q6ZPA2 131 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 IDI2-AS1Q9NZ38 188 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 FOXA2Q9Y261 457 aaPredicted RBP11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 H3BRM9 83 aa11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 HOXA4Q00056 320 aaPredicted RBP11.45□□□□□ -0.58
CLTCL1-201ENST00000412649 IGKV3D-15A0A087WSY6 115 aa11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 GGTLC3B5MD39 225 aa11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 UPK2O00526 184 aa11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 PLA2G5P39877 138 aa11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 HES7Q9BYE0 225 aa11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 LOC107984156A0A0G2JMH3 177 aa11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 CELA3BP08861 270 aa11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 ARL17AQ8IVW1 177 aa11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 TP53TG3Q9ULZ0 132 aa11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 NDUFB3O43676 98 aa11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 IGHV1-24A0A0C4DH33 117 aa11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 TAX1BP3O14907 124 aa11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 SAA2P0DJI9 122 aaPredicted RBP11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 ZNF714Q96N38 554 aa11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 Q9H3A6 140 aa11.44□□□□□ -0.58
CLTCL1-201ENST00000412649 TNFRSF1AP19438 455 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 ORMDL3Q8N138 153 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 COQ2Q96H96 371 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 H3BVH4 76 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 CTRLP40313 264 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 TMEM108Q6UXF1 575 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 TTC9CQ8N5M4 171 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 SMRP1Q8NCR6 262 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 DOCK7Q96N67 2140 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 PMS2P5A8MQ11 134 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 K7EP34 96 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 HBDP02042 147 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 VDAC2P45880 294 aaPredicted RBP11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 CKS1BP61024 79 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 HES1Q14469 280 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 WDR82Q6UXN9 313 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 WFDC3Q8IUB2 231 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 DEFB123Q8N688 67 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 OR5AN1Q8NGI8 311 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 NEUROG1Q92886 237 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 DNAJC13O75165 2243 aa11.43□□□□□ -0.58
CLTCL1-201ENST00000412649 PPIAL4EA0A075B759 164 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 TMEM238LA0A1B0GVL6 79 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 A6NJY4 79 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 PPIAL4FP0DN26 164 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 COX8AP10176 69 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 B3GALT5-AS1P59052 145 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 Q6AWC8 147 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 USF3Q68DE3 2245 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 LOC105371242A0A075B767 164 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 TRAV8-6A0A0B4J262 113 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 PPIAL4CA0A0B4J2A2 164 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 EPOPA6NHQ4 379 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 PPIAL4GP0DN37 164 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 RPL27AP46776 148 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 FAM53AQ6NSI3 398 aaPredicted RBP11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 TNFRSF14Q92956 283 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 CCL13Q99616 98 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 ADAMTS9Q9P2N4 1935 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 FNDC10F2Z333 226 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 SAP30O75446 220 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 FAM231DQ6ZW35 169 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 PPP1R32Q7Z5V6 425 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 OSR1Q8TAX0 266 aaPredicted RBP11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 UFC1Q9Y3C8 167 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 CCL11P51671 97 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 RPEQ96AT9 228 aa11.42□□□□□ -0.58
CLTCL1-201ENST00000412649 TCRBV4S1A1TA0A5B7 111 aa11.41□□□□□ -0.58
CLTCL1-201ENST00000412649 H0YJW9 148 aa11.41□□□□□ -0.58
CLTCL1-201ENST00000412649 KLF5Q13887 457 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-201ENST00000412649 Q1RN00 199 aa11.41□□□□□ -0.58
CLTCL1-201ENST00000412649 OR10W1Q8NGF6 305 aa11.41□□□□□ -0.58
CLTCL1-201ENST00000412649 C2orf83Q53S99 150 aa11.41□□□□□ -0.58
CLTCL1-201ENST00000412649 ZNF788Q6ZQV5 615 aa11.41□□□□□ -0.58
CLTCL1-201ENST00000412649 WIPF2Q8TF74 440 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-201ENST00000412649 IFI27L1Q96BM0 104 aa11.41□□□□□ -0.58
CLTCL1-201ENST00000412649 GP6Q9HCN6 339 aa11.41□□□□□ -0.58
CLTCL1-201ENST00000412649 SAA1P0DJI8 122 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-201ENST00000412649 OR4C13Q8NGP0 309 aa11.41□□□□□ -0.58
CLTCL1-201ENST00000412649 ERVK11-1P61568 191 aa11.4□□□□□ -0.58
CLTCL1-201ENST00000412649 ITLN1Q8WWA0 313 aa11.4□□□□□ -0.58
CLTCL1-201ENST00000412649 SMAD7O15105 426 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-201ENST00000412649 PEAR1Q5VY43 1037 aaPredicted RBP11.4□□□□□ -0.58
CLTCL1-201ENST00000412649 BCL6BQ8N143 479 aaPredicted RBP11.4□□□□□ -0.58
CLTCL1-201ENST00000412649 FGF23Q9GZV9 251 aaPredicted RBP11.4□□□□□ -0.58
CLTCL1-201ENST00000412649 KBTBD11-OT1A0A1B0GTJ5 212 aa11.4□□□□□ -0.58
CLTCL1-201ENST00000412649 MYOD1P15172 320 aa11.4□□□□□ -0.58
CLTCL1-201ENST00000412649 SLC25A48Q6ZT89 311 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-201ENST00000412649 ZNF329Q86UD4 541 aa11.4□□□□□ -0.58
CLTCL1-201ENST00000412649 PRR7Q8TB68 274 aa11.4□□□□□ -0.58
CLTCL1-201ENST00000412649 ZNF479Q96JC4 524 aa11.4□□□□□ -0.58
CLTCL1-201ENST00000412649 TMEM160Q9NX00 188 aa11.4□□□□□ -0.58
CLTCL1-201ENST00000412649 TMEM131Q92545 1883 aa11.4□□□□□ -0.58
CLTCL1-201ENST00000412649 FAM214BQ7L5A3 538 aa11.4□□□□□ -0.59
CLTCL1-201ENST00000412649 RPRMLQ8N4K4 120 aa11.4□□□□□ -0.59
CLTCL1-201ENST00000412649 ZNF785A8K8V0 405 aa11.39□□□□□ -0.59
CLTCL1-201ENST00000412649 IL4P05112 153 aa11.39□□□□□ -0.59
CLTCL1-201ENST00000412649 PSG3Q16557 428 aa11.39□□□□□ -0.59
CLTCL1-201ENST00000412649 RNF138Q8WVD3 245 aa11.39□□□□□ -0.59
CLTCL1-201ENST00000412649 FAM168AQ92567 244 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms