RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 MED18Q9BUE0 208 aa-1.81□□□□□ -2.7
RNU4-61P-201ENST00000411243 ZYG11BQ9C0D3 744 aa-1.81□□□□□ -2.7
RNU4-61P-201ENST00000411243 MED28Q9H204 178 aa-1.81□□□□□ -2.7
RNU4-61P-201ENST00000411243 SCN3BQ9NY72 215 aa-1.81□□□□□ -2.7
RNU4-61P-201ENST00000411243 CCDC59Q9P031 241 aaKnown RBP-1.81□□□□□ -2.7
RNU4-61P-201ENST00000411243 SCP2D1Q9UJQ7 156 aa-1.81□□□□□ -2.7
RNU4-61P-201ENST00000411243 C3orf18Q9UK00 162 aa-1.81□□□□□ -2.7
RNU4-61P-201ENST00000411243 SLC22A13Q9Y226 551 aa-1.81□□□□□ -2.7
RNU4-61P-201ENST00000411243 SNX8Q9Y5X2 465 aa-1.81□□□□□ -2.7
RNU4-61P-201ENST00000411243 DHX29Q7Z478 1369 aaKnown RBP-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 ARHGEF28Q8N1W1 1705 aaKnown RBP-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 TRAV9-1A0A075B6T8 112 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 TRAV27A0A087WT01 109 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 TRBV7-1A0A0A6YYK4 115 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 A0A0U1RQV5 110 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 GOLGA6L7A0A1B0GV03 622 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 OR4C46A6NHA9 309 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 GOLGA8JA6NMD2 632 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 FABP5P3A8MUU1 101 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 C8orf87E5RJ46 101 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 H3BP45 60 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 hCG_2039718K7EN88 272 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 UBE2CO00762 179 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 POLR2DO15514 142 aaKnown RBP-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 PRPSAP2O60256 369 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 ATP6V1G1O75348 118 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 PITX3O75364 302 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 STK16O75716 305 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 VAPBO95292 243 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 HBE1P02100 147 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 TCRBP04435 133 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 GOLGA8HP0CJ92 632 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 DBTP11182 482 aaKnown RBP-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 SRMP19623 302 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 PSMA5P28066 241 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 EIF2B2P49770 351 aaKnown RBP-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 PPP5CP53041 499 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 SNU13P55769 128 aaKnown RBP-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 VBP1P61758 197 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 SPAG1Q07617 926 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 MIR22HGQ0VDD5 57 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 PSMD5Q16401 504 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 CCDC183Q5T5S1 534 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 C1orf134Q5TEV5 83 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 RWDD4Q6NW29 188 aaKnown RBP-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 NDUFAF7Q7L592 441 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 SSX8Q7RTT4 187 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 ARPINQ7Z6K5 226 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 WFDC13Q8IUB5 93 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 LRRC25Q8N386 305 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 CCDC89Q8N998 374 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 GDPD1Q8N9F7 314 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 CCDC112Q8NEF3 446 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 OR7G1Q8NGA0 311 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 OR5B3Q8NH48 314 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 GRPEL2Q8TAA5 225 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 DYNC2LI1Q8TCX1 351 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 CIDECQ96AQ7 238 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 TMEM141Q96I45 108 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 CABS1Q96KC9 395 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 SCGB3A1Q96QR1 104 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 APOL4Q9BPW4 351 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 SPXQ9BT56 116 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 FICDQ9BVA6 458 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 SUCNR1Q9BXA5 334 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 C6orf62Q9GZU0 229 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 OR51M1Q9H341 326 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 SLC35D1Q9NTN3 355 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 HPF1Q9NWY4 346 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 LYARQ9NX58 379 aaKnown RBP-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 MED11Q9P086 117 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 MRPL36Q9P0J6 103 aaKnown RBP-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 ATXN10Q9UBB4 475 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 NAT8BQ9UHF3 227 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 LIPT1Q9Y234 373 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 CCDC88AQ3V6T2 1871 aa-1.82□□□□□ -2.7
RNU4-61P-201ENST00000411243 RAB3GAP2Q9H2M9 1393 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 PBRM1Q86U86 1689 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 A0A087X0T9 212 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 TRAV8-1A0A0A6YYK1 113 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 MMP24-AS1A0A0U1RRL7 71 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 KBTBD11-OT1A0A1B0GTJ5 212 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 LRRIQ4A6NIV6 560 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 OR2AG2A6NM03 316 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 SYS1-DBNDD2H3BUS1 97 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 H7C0C1 242 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 TCAPO15273 167 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 CRCPO75575 148 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 SNX4O95219 450 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 PRDX6P30041 224 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 ATP5OP48047 213 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 GCLMP48507 274 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 TAS2R60P59551 318 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 SNRPD3P62318 126 aaKnown RBP-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 POLR2GP62487 172 aaKnown RBP eCLIP-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 RPL30P62888 115 aaKnown RBP-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 DEFB136Q30KP8 78 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 KHDC3LQ587J8 217 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 BRMS1LQ5PSV4 323 aa-1.83□□□□□ -2.7
RNU4-61P-201ENST00000411243 DPPA3Q6W0C5 159 aa-1.83□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms