RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 RAB20Q9NX57 234 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 PSORS1C1Q9UIG5 152 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 LINC00527Q9UJ94 153 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 KCNIP3Q9Y2W7 256 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 PIK3C2AO00443 1686 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 RIMBP3CA6NJZ7 1639 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 RIMBP3BA6NNM3 1639 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 RIMBP3Q9UFD9 1639 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 MYO5BQ9ULV0 1848 aa-2.58□□□□□ -2.82
RNU4-88P-201ENST00000411220 CLIP1P30622 1438 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 SPHKAPQ2M3C7 1700 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 KIF1AQ12756 1690 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 PLCH1Q4KWH8 1693 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 TRBV10-1A0A0K0K1A3 114 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 CXorf51AA0A1B0GTR3 108 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 A0A1B0GW64 132 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 hCG_1809904A0A1W2PP81 198 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 A0A1W2PPE2 198 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 A0A1W2PR64 198 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 A0A1W2PRV1 198 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 C9JCJ5 164 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 F8W8V4 182 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 K7ERQ8 282 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 IFRD1O00458 451 aaPredicted RBP-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 CTDSP2O14595 271 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 GGCTO75223 188 aaKnown RBP-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 YEATS4O95619 227 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 IFNA14P01570 189 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 GGT1P19440 569 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 HLA-DPA1P20036 260 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 ADORA1P30542 326 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 SDC4P31431 198 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 HPCAL1P37235 193 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 UBE2D1P51668 147 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 RGS8P57771 180 aaPredicted RBP-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 RPL7AP62424 266 aaKnown RBP-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 PPP2R5AQ15172 486 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 TOMM34Q15785 309 aaPredicted RBP-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 GRK1Q15835 563 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 CEACAM16Q2WEN9 425 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 CLLU1OSQ5K130 101 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 HIST2H2AA3Q6FI13 130 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 DPPA3Q6W0C5 159 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 NRARPQ7Z6K4 114 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 EFCAB13Q8IY85 973 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 OFCC1Q8IZS5 231 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 OR4K17Q8NGC6 315 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 OR2T35Q8NGX2 323 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 OR4L1Q8NH43 312 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 CNIH3Q8TBE1 160 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 TMEM234Q8WY98 164 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 FAM210AQ96ND0 272 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 RAB1BQ9H0U4 201 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 ATG5Q9H1Y0 275 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 HEBP1Q9NRV9 189 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 NOL12Q9UGY1 213 aaKnown RBP eCLIP-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 APOBEC2Q9Y235 224 aaKnown RBP-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 GOLT1BQ9Y3E0 138 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 MRFAP1Q9Y605 127 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 RGPD2P0DJD1 1756 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 DOT1LQ8TEK3 1739 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 TECPR2O15040 1411 aa-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 WRNQ14191 1432 aaPredicted RBP eCLIP-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 PRG4Q92954 1404 aaPredicted RBP-2.59□□□□□ -2.82
RNU4-88P-201ENST00000411220 CCDC7Q96M83 1385 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 ABCC4O15439 1325 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 CDHR2Q9BYE9 1310 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 TRGV10A0A0A0MS01 117 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 TINCRA0A1B0GVN0 87 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 A0A1W2PPW3 197 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 A0A1W2PQ09 198 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 H3BQV1 296 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 I3L4J1 428 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 M0QY20 66 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 HLA-DRB1P01911 266 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 MYL1P05976 194 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 CCKP06307 115 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 CST2P09228 141 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 CCDC192P0DO97 292 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 CXCR1P25024 350 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR10J1P30954 320 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 GNALP38405 381 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 RPL10AP62906 217 aaKnown RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 HIST1H3AP68431 136 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 RPL19P84098 196 aaKnown RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 SSBP1Q04837 148 aaKnown RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 KRR1Q13601 381 aaKnown RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR2F1Q13607 317 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 IDI1Q13907 227 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 HADHQ16836 314 aaKnown RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 UBE2NLQ5JXB2 153 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 C1orf185Q5T7R7 199 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 HIST2H3PS2Q5TEC6 136 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 HACD4Q5VWC8 232 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 DHRS7BQ6IAN0 325 aaPredicted RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 FAM151BQ6UXP7 276 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 TMEM182Q6ZP80 229 aaPredicted RBP-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 HIST2H3AQ71DI3 136 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 RRAGAQ7L523 313 aa-2.6□□□□□ -2.83
RNU4-88P-201ENST00000411220 LPCAT2Q7L5N7 544 aa-2.6□□□□□ -2.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms