RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ASPHD2Q6ICH7 369 aa9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 ORMDL3Q8N138 153 aa9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 TMEM105Q8N8V8 129 aa9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 RNF114Q9Y508 228 aa9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 RAMP1O60894 148 aa9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 DEFB130BP0DP73 79 aa9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 DEFB130AP0DP74 79 aa9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 CFHR1Q03591 330 aa9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 DSCAMO60469 2012 aa9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 E9PQ18 207 aa9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 GPX4P36969 197 aaPredicted RBP9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 NDPQ00604 133 aa9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 C8orf82Q6P1X6 216 aaPredicted RBP9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 PSMG3Q9BT73 122 aaPredicted RBP9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 TRBV9A0A0B4J1U6 114 aa9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 KLF4O43474 513 aa9.41□□□□□ -0.9
PRPF40A-202ENST00000410080 F5H768 121 aa9.4□□□□□ -0.9
PRPF40A-202ENST00000410080 TANC1Q9C0D5 1861 aa9.4□□□□□ -0.9
PRPF40A-202ENST00000410080 RPL15P61313 204 aaKnown RBP9.4□□□□□ -0.9
PRPF40A-202ENST00000410080 THAP8Q8NA92 274 aa9.4□□□□□ -0.9
PRPF40A-202ENST00000410080 IMMP1LQ96LU5 166 aa9.4□□□□□ -0.9
PRPF40A-202ENST00000410080 IFI27L2Q9H2X8 130 aa9.4□□□□□ -0.9
PRPF40A-202ENST00000410080 RPP21Q9H633 154 aaKnown RBP9.4□□□□□ -0.9
PRPF40A-202ENST00000410080 TMEM8BA6NDV4 472 aa9.4□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM90A26D6RGX4 464 aa9.4□□□□□ -0.91
PRPF40A-202ENST00000410080 ZNF625Q96I27 306 aaPredicted RBP9.4□□□□□ -0.91
PRPF40A-202ENST00000410080 SAA2-SAA4A0A096LPE2 208 aa9.4□□□□□ -0.91
PRPF40A-202ENST00000410080 DPRXA6NFQ7 191 aa9.4□□□□□ -0.91
PRPF40A-202ENST00000410080 SAA2P0DJI9 122 aaPredicted RBP9.4□□□□□ -0.91
PRPF40A-202ENST00000410080 GZMMP51124 257 aa9.4□□□□□ -0.91
PRPF40A-202ENST00000410080 ERCC8Q13216 396 aa9.4□□□□□ -0.91
PRPF40A-202ENST00000410080 SMIM8Q96KF7 97 aa9.4□□□□□ -0.91
PRPF40A-202ENST00000410080 ZNF474Q6S9Z5 364 aaPredicted RBP9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 C9orf62Q8N4C0 152 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 APCDD1LQ8NCL9 501 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 AQP3Q92482 292 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 CHTOPQ9Y3Y2 248 aaKnown RBP9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 M0R2P5 195 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 PLNP26678 52 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM19A2Q8N3H0 131 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 LINC00312Q9Y6C7 94 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 NDUFS5O43920 106 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 RIPPLY2Q5TAB7 128 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 DMRTA1Q5VZB9 504 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 Q96MF0 132 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 PCDH15Q96QU1 1955 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 ZNF345Q14585 488 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 DENND4CQ5VZ89 1909 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 OSR1Q8TAX0 266 aaPredicted RBP9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 GDF15Q99988 308 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 C5orf66Q9H5L9 145 aa9.39□□□□□ -0.91
PRPF40A-202ENST00000410080 SMIM6P0DI80 62 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 TMEM155Q4W5P6 130 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 TNRC6AQ8NDV7 1962 aaKnown RBP9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 SRSF1Q07955 248 aaKnown RBP eCLIP9.38□□□□□ -0.912e-15■■■□□ 18.7
PRPF40A-202ENST00000410080 ZNF562Q6V9R5 426 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 Q96M66 194 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 CITED1Q99966 193 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 FABP5P3A8MUU1 101 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 LIMS1P48059 325 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 PIP4P2Q8N4L2 257 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 SPRR3Q9UBC9 169 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 FCN3O75636 299 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 ORAOV1Q8WV07 137 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 TMEM133Q9H2Q1 129 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 MS4A6AQ9H2W1 248 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 TRAV8-4A0A0B4J246 113 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 C17orf98A8MV24 154 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 RNF223E7ERA6 249 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 WDYHV1Q96HA8 205 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 TRAV41A0A0B4J266 112 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 SRSF4Q08170 494 aaKnown RBP9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 MIR17HGQ75NE6 70 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 ZNF329Q86UD4 541 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 ASCL2Q99929 193 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 RNASE7Q9H1E1 156 aaKnown RBP9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 IGKV2-40A0A087WW87 121 aaPredicted RBP9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 TRBV5-3A0A0A0MS03 114 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 H3BUX3 64 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 RAMP3O60896 148 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 IGKV2D-40P01614 121 aaPredicted RBP9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 PSG7Q13046 419 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 C6orf226Q5I0X4 101 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 ANAPC10Q9UM13 185 aa9.38□□□□□ -0.91
PRPF40A-202ENST00000410080 C22orf46C9J442 243 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 TIMM23O14925 209 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 GREM1O60565 184 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 C15orf32Q32M92 178 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 LINC01356Q8N9X3 169 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 IMMP2LQ96T52 175 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 EML5Q05BV3 1969 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 ITGB1BP1O14713 200 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 TMEM249Q2WGJ8 235 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 DKK4Q9UBT3 224 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 KIAA1549LQ6ZVL6 1849 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM90A10PA6NDY2 464 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM90A18PA6NE21 464 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM90A16PA6NEW6 464 aa9.37□□□□□ -0.91
PRPF40A-202ENST00000410080 FAM90A20PA6NIJ5 464 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms