RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 IGHV1-24A0A0C4DH33 117 aa2.53□□□□□ -2
CUL3-204ENST00000409777 TEX50A0A1B0GTY4 177 aa2.53□□□□□ -2
CUL3-204ENST00000409777 SYS1-DBNDD2H3BUS1 97 aa2.53□□□□□ -2
CUL3-204ENST00000409777 PEX7O00628 323 aa2.53□□□□□ -2
CUL3-204ENST00000409777 ZNF883P0CG24 379 aa2.53□□□□□ -2
CUL3-204ENST00000409777 SAA2P0DJI9 122 aaPredicted RBP2.53□□□□□ -2
CUL3-204ENST00000409777 USF1P22415 310 aaPredicted RBP2.53□□□□□ -2
CUL3-204ENST00000409777 PRDX2P32119 198 aa2.53□□□□□ -2
CUL3-204ENST00000409777 CXCL12P48061 93 aa2.53□□□□□ -2
CUL3-204ENST00000409777 MFAP4P55083 255 aa2.53□□□□□ -2
CUL3-204ENST00000409777 ERVK-16P61578 105 aa2.53□□□□□ -2
CUL3-204ENST00000409777 COTL1Q14019 142 aa2.53□□□□□ -2
CUL3-204ENST00000409777 PSG5Q15238 335 aa2.53□□□□□ -2
CUL3-204ENST00000409777 RPL39P5Q59GN2 51 aa2.53□□□□□ -2
CUL3-204ENST00000409777 UTF1Q5T230 341 aa2.53□□□□□ -2
CUL3-204ENST00000409777 MORN5Q5VZ52 161 aa2.53□□□□□ -2
CUL3-204ENST00000409777 LCN12Q6JVE5 192 aa2.53□□□□□ -2
CUL3-204ENST00000409777 SLC25A48Q6ZT89 311 aaKnown RBP2.53□□□□□ -2
CUL3-204ENST00000409777 SEM1Q6ZVN7 128 aa2.53□□□□□ -2
CUL3-204ENST00000409777 COX8CQ7Z4L0 72 aa2.53□□□□□ -2
CUL3-204ENST00000409777 MCEMP1Q8IX19 187 aa2.53□□□□□ -2
CUL3-204ENST00000409777 S1PR3Q99500 378 aa2.53□□□□□ -2
CUL3-204ENST00000409777 PMCHL2Q9BQD1 86 aa2.53□□□□□ -2
CUL3-204ENST00000409777 TMEM70Q9BUB7 260 aa2.53□□□□□ -2
CUL3-204ENST00000409777 SCNM1Q9BWG6 230 aa2.53□□□□□ -2
CUL3-204ENST00000409777 RBM7Q9Y580 266 aaKnown RBP2.53□□□□□ -2
CUL3-204ENST00000409777 U3KQK5 164 aa2.53□□□□□ -2
CUL3-204ENST00000409777 DOCK11Q5JSL3 2073 aa2.53□□□□□ -2
CUL3-204ENST00000409777 ARID1AO14497 2285 aa2.53□□□□□ -2
CUL3-204ENST00000409777 PIEZO1Q92508 2521 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 KBTBD11-OT1A0A1B0GTJ5 212 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 A0A1W2PNU3 283 aaPredicted RBP2.53□□□□□ -2.01
CUL3-204ENST00000409777 M0R1X1 148 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 IGLC1P0CG04 106 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 APOBEC3AP31941 199 aaPredicted RBP2.53□□□□□ -2.01
CUL3-204ENST00000409777 CA7P43166 264 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 ZNF137PP52743 207 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 MZT1Q08AG7 82 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 FXYD3Q14802 87 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 OCIAD2Q56VL3 154 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 C9orf135Q5VTT2 229 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 MRPL54Q6P161 138 aaKnown RBP2.53□□□□□ -2.01
CUL3-204ENST00000409777 ZNF826PQ6ZT77 177 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 ZCCHC24Q8N2G6 241 aaKnown RBP2.53□□□□□ -2.01
CUL3-204ENST00000409777 FAM19A2Q8N3H0 131 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 GTSF1Q8WW33 167 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 ITLN1Q8WWA0 313 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 H1FXQ92522 213 aaKnown RBP2.53□□□□□ -2.01
CUL3-204ENST00000409777 LOXL4Q96JB6 756 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 TXN2Q99757 166 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 DCTN5Q9BTE1 182 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 HES7Q9BYE0 225 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 FAM234AQ9H0X4 552 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 CST9LQ9H4G1 147 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 CALYQ9NYX4 217 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 KLF13Q9Y2Y9 288 aaPredicted RBP2.53□□□□□ -2.01
CUL3-204ENST00000409777 OR51B2Q9Y5P1 312 aa2.53□□□□□ -2.01
CUL3-204ENST00000409777 ASCC3Q8N3C0 2202 aaKnown RBP2.53□□□□□ -2.01
CUL3-204ENST00000409777 IGLV3-9A0A075B6K5 115 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 LOC102724200A0A096LPH7 203 aaPredicted RBP2.52□□□□□ -2.01
CUL3-204ENST00000409777 IGLV2-23P01705 113 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 IGLV2-11P01706 119 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 IGHV3-13P01766 116 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 CT45A6P0DMU7 189 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 CT45A5P0DMU8 189 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 CT45A7P0DMV0 189 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 COX8AP10176 69 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 GP9P14770 177 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 HNF1AP20823 631 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 MEOX1P50221 254 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 TIRAPP58753 221 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 ARF6P62330 175 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 HIST1H1AQ02539 215 aaPredicted RBP2.52□□□□□ -2.01
CUL3-204ENST00000409777 MSMPQ1L6U9 139 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 KIAA1644Q3SXP7 199 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 FAM180AQ6UWF9 173 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 ZNF493Q6ZR52 646 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 SSX8Q7RTT4 187 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 VKORC1L1Q8N0U8 176 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 C11orf44Q8N8P7 122 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 TMEM167AQ8TBQ9 72 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 BORCS7Q96B45 105 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 RITA1Q96K30 269 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 FAM103A1Q9BTL3 118 aaKnown RBP2.52□□□□□ -2.01
CUL3-204ENST00000409777 RAB9BQ9NP90 201 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 TPSG1Q9NRR2 321 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 TMEM14CQ9P0S9 112 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 USF3Q68DE3 2245 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 A0A096LNJ9 63 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 IGHV3-43A0A0B4J1X8 118 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 TCRBV4S1A1TA0A5B7 111 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 M0R2Z0 102 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 TNFRSF13BO14836 293 aaPredicted RBP2.52□□□□□ -2.01
CUL3-204ENST00000409777 SIVA1O15304 175 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 TFF1P04155 84 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 NBEAP1P0C6P0 100 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 IGHV3-43DP0DP04 118 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 HIST1H1EP10412 219 aaKnown RBP2.52□□□□□ -2.01
CUL3-204ENST00000409777 SPINK2P20155 84 aa2.52□□□□□ -2.01
CUL3-204ENST00000409777 OTX2P32243 289 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms