RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 ID3Q02535 119 aa23.4■■□□□ 1.34
TRAF3IP1-203ENST00000409739 OR1S2Q8NGQ3 325 aa23.4■■□□□ 1.34
TRAF3IP1-203ENST00000409739 ENKURQ8TC29 256 aa23.4■■□□□ 1.34
TRAF3IP1-203ENST00000409739 NEURL2Q9BR09 285 aa23.4■■□□□ 1.34
TRAF3IP1-203ENST00000409739 IGHV3-49A0A0A0MS15 119 aa23.39■■□□□ 1.33
TRAF3IP1-203ENST00000409739 TRAV14DV4A0A0A6YYC5 116 aa23.39■■□□□ 1.33
TRAF3IP1-203ENST00000409739 A8MZ25 164 aa23.39■■□□□ 1.33
TRAF3IP1-203ENST00000409739 OR10J1P30954 320 aa23.39■■□□□ 1.33
TRAF3IP1-203ENST00000409739 NKX2-1P43699 371 aaPredicted RBP23.39■■□□□ 1.33
TRAF3IP1-203ENST00000409739 RBPMS2Q6ZRY4 209 aaKnown RBP23.39■■□□□ 1.33
TRAF3IP1-203ENST00000409739 NPIPB3Q92617 1050 aa23.39■■□□□ 1.33
TRAF3IP1-203ENST00000409739 ACY3Q96HD9 319 aa23.39■■□□□ 1.33
TRAF3IP1-203ENST00000409739 ASCL2Q99929 193 aa23.39■■□□□ 1.33
TRAF3IP1-203ENST00000409739 CHEK1O14757 476 aa23.38■■□□□ 1.33
TRAF3IP1-203ENST00000409739 IAH1Q2TAA2 248 aaPredicted RBP23.38■■□□□ 1.33
TRAF3IP1-203ENST00000409739 C19orf73Q9NVV2 129 aa23.38■■□□□ 1.33
TRAF3IP1-203ENST00000409739 POLR2GP62487 172 aaKnown RBP eCLIP23.37■■□□□ 1.33
TRAF3IP1-203ENST00000409739 RAB11AP62491 216 aa23.37■■□□□ 1.33
TRAF3IP1-203ENST00000409739 RHPN1-AS1Q9BWJ2 59 aa23.37■■□□□ 1.33
TRAF3IP1-203ENST00000409739 PAIP2BQ9ULR5 123 aaKnown RBP23.37■■□□□ 1.33
TRAF3IP1-203ENST00000409739 CCSO14618 274 aa23.36■■□□□ 1.33
TRAF3IP1-203ENST00000409739 GPX4P36969 197 aaPredicted RBP23.36■■□□□ 1.33
TRAF3IP1-203ENST00000409739 ZBTB8BQ8NAP8 495 aaPredicted RBP23.36■■□□□ 1.33
TRAF3IP1-203ENST00000409739 RNF2Q99496 336 aa23.36■■□□□ 1.33
TRAF3IP1-203ENST00000409739 IGHV3OR16-13A0A075B7E8 117 aa23.35■■□□□ 1.33
TRAF3IP1-203ENST00000409739 IGHV3-74A0A0B4J1X5 117 aa23.35■■□□□ 1.33
TRAF3IP1-203ENST00000409739 TSPAN4O14817 238 aa23.35■■□□□ 1.33
TRAF3IP1-203ENST00000409739 RPP30P78346 268 aaKnown RBP23.35■■□□□ 1.33
TRAF3IP1-203ENST00000409739 LAMTOR1Q6IAA8 161 aa23.35■■□□□ 1.33
TRAF3IP1-203ENST00000409739 SBSPONQ8IVN8 264 aa23.35■■□□□ 1.33
TRAF3IP1-203ENST00000409739 SPAG8Q99932 426 aaPredicted RBP23.35■■□□□ 1.33
TRAF3IP1-203ENST00000409739 WFDC10AQ9H1F0 79 aa23.35■■□□□ 1.33
TRAF3IP1-203ENST00000409739 H3BP45 60 aa23.34■■□□□ 1.33
TRAF3IP1-203ENST00000409739 NHLRC4P0CG21 123 aaPredicted RBP23.34■■□□□ 1.33
TRAF3IP1-203ENST00000409739 YPEL3P61236 119 aaPredicted RBP23.34■■□□□ 1.33
TRAF3IP1-203ENST00000409739 SPANXN5Q5MJ07 72 aa23.34■■□□□ 1.33
TRAF3IP1-203ENST00000409739 NRARPQ7Z6K4 114 aa23.34■■□□□ 1.33
TRAF3IP1-203ENST00000409739 C12orf45Q8N5I9 185 aaPredicted RBP23.34■■□□□ 1.33
TRAF3IP1-203ENST00000409739 SLC35E1Q96K37 410 aa23.34■■□□□ 1.33
TRAF3IP1-203ENST00000409739 SSSCA1O60232 199 aa23.33■■□□□ 1.33
TRAF3IP1-203ENST00000409739 SCGB1D2O95969 90 aa23.33■■□□□ 1.33
TRAF3IP1-203ENST00000409739 APOHP02749 345 aaPredicted RBP23.33■■□□□ 1.33
TRAF3IP1-203ENST00000409739 GAMTQ14353 236 aa23.33■■□□□ 1.33
TRAF3IP1-203ENST00000409739 ST8SIA2Q92186 375 aa23.33■■□□□ 1.33
TRAF3IP1-203ENST00000409739 PRSS46E5RG02 174 aa23.32■■□□□ 1.32
TRAF3IP1-203ENST00000409739 IL5P05113 134 aa23.32■■□□□ 1.32
TRAF3IP1-203ENST00000409739 VSIRQ9H7M9 311 aa23.32■■□□□ 1.32
TRAF3IP1-203ENST00000409739 GSKIPQ9P0R6 139 aa23.32■■□□□ 1.32
TRAF3IP1-203ENST00000409739 STRAPQ9Y3F4 350 aaKnown RBP23.32■■□□□ 1.32
TRAF3IP1-203ENST00000409739 OR11H12B2RN74 326 aa23.31■■□□□ 1.32
TRAF3IP1-203ENST00000409739 BMI1P35226 326 aa23.31■■□□□ 1.32
TRAF3IP1-203ENST00000409739 DEFB125Q8N687 156 aa23.31■■□□□ 1.32
TRAF3IP1-203ENST00000409739 TUBA4BQ9H853 241 aa23.31■■□□□ 1.32
TRAF3IP1-203ENST00000409739 DEFA1P59665 94 aa23.3■■□□□ 1.32
TRAF3IP1-203ENST00000409739 DEFA3P59666 94 aa23.3■■□□□ 1.32
TRAF3IP1-203ENST00000409739 Q8WTZ3 238 aa23.3■■□□□ 1.32
TRAF3IP1-203ENST00000409739 METTL26Q96S19 204 aa23.3■■□□□ 1.32
TRAF3IP1-203ENST00000409739 PSENENQ9NZ42 101 aa23.3■■□□□ 1.32
TRAF3IP1-203ENST00000409739 RCL1Q9Y2P8 373 aaKnown RBP23.3■■□□□ 1.32
TRAF3IP1-203ENST00000409739 IGHV3-66A0A0C4DH42 116 aa23.29■■□□□ 1.32
TRAF3IP1-203ENST00000409739 FAM25EA8MYX2 175 aa23.29■■□□□ 1.32
TRAF3IP1-203ENST00000409739 TOMM40O96008 361 aa23.29■■□□□ 1.32
TRAF3IP1-203ENST00000409739 NPPCP23582 126 aa23.29■■□□□ 1.32
TRAF3IP1-203ENST00000409739 CRYBB3P26998 211 aa23.29■■□□□ 1.32
TRAF3IP1-203ENST00000409739 FAM90A2PQ658T7 463 aa23.29■■□□□ 1.32
TRAF3IP1-203ENST00000409739 SMIM8Q96KF7 97 aa23.29■■□□□ 1.32
TRAF3IP1-203ENST00000409739 IGKV1D-37A0A075B6S9 117 aa23.28■■□□□ 1.32
TRAF3IP1-203ENST00000409739 MBPP02686 304 aaPredicted RBP23.28■■□□□ 1.32
TRAF3IP1-203ENST00000409739 PAX9P55771 341 aa23.28■■□□□ 1.32
TRAF3IP1-203ENST00000409739 LILRB2Q8N423 598 aa23.28■■□□□ 1.32
TRAF3IP1-203ENST00000409739 C5orf51A6NDU8 294 aa23.27■■□□□ 1.32
TRAF3IP1-203ENST00000409739 ZFP92A6NM28 416 aa23.27■■□□□ 1.32
TRAF3IP1-203ENST00000409739 TCF24Q7RTU0 167 aa23.27■■□□□ 1.32
TRAF3IP1-203ENST00000409739 RAB40CQ96S21 281 aa23.27■■□□□ 1.32
TRAF3IP1-203ENST00000409739 SRD5A3Q9H8P0 318 aa23.27■■□□□ 1.32
TRAF3IP1-203ENST00000409739 HUWE1Q7Z6Z7 4374 aaKnown RBP23.26■■□□□ 1.31
TRAF3IP1-203ENST00000409739 IL4P05112 153 aa23.26■■□□□ 1.31
TRAF3IP1-203ENST00000409739 RD3LP0DJH9 198 aa23.26■■□□□ 1.31
TRAF3IP1-203ENST00000409739 PSG1P11464 419 aa23.26■■□□□ 1.31
TRAF3IP1-203ENST00000409739 USF2Q15853 346 aaPredicted RBP23.26■■□□□ 1.31
TRAF3IP1-203ENST00000409739 TMEM231Q9H6L2 316 aa23.26■■□□□ 1.31
TRAF3IP1-203ENST00000409739 TENM3Q9P273 2699 aa23.25■■□□□ 1.31
TRAF3IP1-203ENST00000409739 OR4C46A6NHA9 309 aa23.25■■□□□ 1.31
TRAF3IP1-203ENST00000409739 GPN1Q9HCN4 374 aaPredicted RBP23.25■■□□□ 1.31
TRAF3IP1-203ENST00000409739 U3KQK5 164 aa23.25■■□□□ 1.31
TRAF3IP1-203ENST00000409739 IGKV1OR2-108A0A075B7D4 117 aa23.24■■□□□ 1.31
TRAF3IP1-203ENST00000409739 A0A1W2PS18 150 aa23.24■■□□□ 1.31
TRAF3IP1-203ENST00000409739 INMT-MINDY4F8WBC2 141 aa23.24■■□□□ 1.31
TRAF3IP1-203ENST00000409739 CD5P06127 495 aa23.24■■□□□ 1.31
TRAF3IP1-203ENST00000409739 ZNF90Q03938 601 aa23.24■■□□□ 1.31
TRAF3IP1-203ENST00000409739 LINC00322Q6ZN03 302 aaPredicted RBP23.24■■□□□ 1.31
TRAF3IP1-203ENST00000409739 ACOT7LQ6ZUV0 252 aa23.24■■□□□ 1.31
TRAF3IP1-203ENST00000409739 THAP8Q8NA92 274 aa23.24■■□□□ 1.31
TRAF3IP1-203ENST00000409739 C2orf50Q96LR7 162 aa23.24■■□□□ 1.31
TRAF3IP1-203ENST00000409739 U3KQE9 123 aa23.24■■□□□ 1.31
TRAF3IP1-203ENST00000409739 IGKV3-7A0A075B6H7 116 aa23.23■■□□□ 1.31
TRAF3IP1-203ENST00000409739 RBMY1BA6NDE4 496 aaKnown RBP23.23■■□□□ 1.31
TRAF3IP1-203ENST00000409739 RBMY1EA6NEQ0 496 aaKnown RBP23.23■■□□□ 1.31
TRAF3IP1-203ENST00000409739 PMS2P5A8MQ11 134 aa23.23■■□□□ 1.31
TRAF3IP1-203ENST00000409739 DFFBO76075 338 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms