RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 OR5C1Q8NGR4 320 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 SLC35E1Q96K37 410 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 SLC25A31Q9H0C2 315 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 PEF1Q9UBV8 284 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 TRBV7-1A0A0A6YYK4 115 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 TAAR5O14804 337 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 BCL2L11O43521 198 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 OR2C1O95371 312 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 TSPAN15O95858 294 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 TIGITQ495A1 244 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 SPATA3Q8NHX4 192 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 CYTL1Q9NRR1 136 aa10.86□□□□□ -0.67
CHRNA1-204ENST00000409323 IGKV1OR2-108A0A075B7D4 117 aa10.85□□□□□ -0.67
CHRNA1-204ENST00000409323 UBE2L5PA0A1B0GUS4 154 aa10.85□□□□□ -0.67
CHRNA1-204ENST00000409323 CCL24O00175 119 aa10.85□□□□□ -0.67
CHRNA1-204ENST00000409323 CFDP00746 253 aaPredicted RBP10.85□□□□□ -0.67
CHRNA1-204ENST00000409323 ADMP35318 185 aa10.85□□□□□ -0.67
CHRNA1-204ENST00000409323 ATP5IP56385 69 aaPredicted RBP10.85□□□□□ -0.67
CHRNA1-204ENST00000409323 ETFRF1Q6IPR1 90 aa10.85□□□□□ -0.67
CHRNA1-204ENST00000409323 SHISA2Q6UWI4 295 aa10.85□□□□□ -0.67
CHRNA1-204ENST00000409323 OR1N2Q8NGR9 330 aa10.85□□□□□ -0.67
CHRNA1-204ENST00000409323 OR4X1Q8NH49 305 aa10.85□□□□□ -0.67
CHRNA1-204ENST00000409323 STOML3Q8TAV4 291 aa10.85□□□□□ -0.67
CHRNA1-204ENST00000409323 ARPC5LQ9BPX5 153 aa10.85□□□□□ -0.67
CHRNA1-204ENST00000409323 TGOLN2O43493 480 aa10.84□□□□□ -0.67
CHRNA1-204ENST00000409323 CLN5O75503 358 aa10.84□□□□□ -0.67
CHRNA1-204ENST00000409323 IFNA7P01567 189 aa10.84□□□□□ -0.67
CHRNA1-204ENST00000409323 CTSGP08311 255 aa10.84□□□□□ -0.67
CHRNA1-204ENST00000409323 OR10J1P30954 320 aa10.84□□□□□ -0.67
CHRNA1-204ENST00000409323 GPX4P36969 197 aaPredicted RBP10.84□□□□□ -0.67
CHRNA1-204ENST00000409323 NUP62P37198 522 aaPredicted RBP10.84□□□□□ -0.67
CHRNA1-204ENST00000409323 DLK1P80370 383 aa10.84□□□□□ -0.67
CHRNA1-204ENST00000409323 OR1S2Q8NGQ3 325 aa10.84□□□□□ -0.67
CHRNA1-204ENST00000409323 DPF1Q92782 380 aa10.84□□□□□ -0.67
CHRNA1-204ENST00000409323 WFDC1Q9HC57 220 aa10.84□□□□□ -0.67
CHRNA1-204ENST00000409323 KANTRA0A1W2PQU2 76 aa10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 ZFP92A6NM28 416 aa10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 HSPB1P04792 205 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 IGLC1P0CG04 106 aa10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 HOXD3P31249 432 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 NPBWR1P48145 328 aa10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 HBG1P69891 147 aa10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 HBG2P69892 147 aa10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 ZNF90Q03938 601 aa10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 ZNF616Q08AN1 781 aa10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 TMEM116Q8NCL8 245 aa10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 CACNG8Q8WXS5 425 aa10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 PHYHIPLQ96FC7 376 aa10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 FBXL17Q9UF56 701 aa10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 SELENOKQ9Y6D0 94 aa10.83□□□□□ -0.68
CHRNA1-204ENST00000409323 IGKV1D-37A0A075B6S9 117 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 LINC01619G3V211 115 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 NUPL2O15504 423 aaKnown RBP10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 IGKV1-17P01599 117 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 PF4P02776 101 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 EDN2P20800 178 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 GATA2P23769 480 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 BAXQ07812 192 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 NDUFA5Q16718 116 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 RPEL1Q2QD12 228 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 TREML4Q6UXN2 200 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 ZNF414Q96IQ9 312 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 UQCC1Q9NVA1 299 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 ZNF207O43670 478 aaKnown RBP10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 GGCTO75223 188 aaKnown RBP10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 YIF1AO95070 293 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 SYNJ2BPP57105 145 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 RUNX1Q01196 453 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 UNQ9165/PRO28630Q6UXU0 137 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 TMEM182Q6ZP80 229 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 DLX4Q92988 240 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 RCC1LQ96I51 464 aaKnown RBP10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 TMEM147Q9BVK8 224 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 ARV1Q9H2C2 271 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 RFNGQ9Y644 331 aa10.82□□□□□ -0.68
CHRNA1-204ENST00000409323 ZNF320A2RRD8 509 aa10.81□□□□□ -0.68
CHRNA1-204ENST00000409323 FGF7P21781 194 aa10.81□□□□□ -0.68
CHRNA1-204ENST00000409323 ST8SIA2Q92186 375 aa10.81□□□□□ -0.68
CHRNA1-204ENST00000409323 TXN2Q99757 166 aa10.81□□□□□ -0.68
CHRNA1-204ENST00000409323 C20orf24Q9BUV8 137 aa10.81□□□□□ -0.68
CHRNA1-204ENST00000409323 UBQLN2Q9UHD9 624 aa10.81□□□□□ -0.68
CHRNA1-204ENST00000409323 JTBO76095 146 aa10.8□□□□□ -0.68
CHRNA1-204ENST00000409323 FCGR2BP31994 310 aaPredicted RBP10.8□□□□□ -0.68
CHRNA1-204ENST00000409323 FHL3Q13643 280 aa10.8□□□□□ -0.68
CHRNA1-204ENST00000409323 TMEM144Q7Z5S9 345 aa10.8□□□□□ -0.68
CHRNA1-204ENST00000409323 OR4F17Q8NGA8 305 aa10.8□□□□□ -0.68
CHRNA1-204ENST00000409323 OR4F4Q96R69 305 aa10.8□□□□□ -0.68
CHRNA1-204ENST00000409323 MGST2Q99735 147 aa10.8□□□□□ -0.68
CHRNA1-204ENST00000409323 ATP5SQ99766 215 aa10.8□□□□□ -0.68
CHRNA1-204ENST00000409323 NPVFQ9HCQ7 196 aa10.8□□□□□ -0.68
CHRNA1-204ENST00000409323 PUS1Q9Y606 427 aaKnown RBP eCLIP10.8□□□□□ -0.68
CHRNA1-204ENST00000409323 IGHV3-49A0A0A0MS15 119 aa10.79□□□□□ -0.68
CHRNA1-204ENST00000409323 VWC2Q2TAL6 325 aa10.79□□□□□ -0.68
CHRNA1-204ENST00000409323 CLLU1Q5K131 121 aa10.79□□□□□ -0.68
CHRNA1-204ENST00000409323 TEPPQ6URK8 271 aa10.79□□□□□ -0.68
CHRNA1-204ENST00000409323 BTNL8Q6UX41 500 aa10.79□□□□□ -0.68
CHRNA1-204ENST00000409323 BAP18Q8IXM2 172 aa10.79□□□□□ -0.68
CHRNA1-204ENST00000409323 THAP8Q8NA92 274 aa10.79□□□□□ -0.68
CHRNA1-204ENST00000409323 GGACTQ9BVM4 153 aa10.79□□□□□ -0.68
CHRNA1-204ENST00000409323 ZNF471Q9BX82 626 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms