RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 TFF1P04155 84 aa10.4□□□□□ -0.74
HERC3-203ENST00000407637 C8orf88P0DMB2 117 aa10.4□□□□□ -0.74
HERC3-203ENST00000407637 PYYP10082 97 aa10.4□□□□□ -0.74
HERC3-203ENST00000407637 ZADH2Q8N4Q0 377 aa10.4□□□□□ -0.74
HERC3-203ENST00000407637 NDFIP1Q9BT67 221 aa10.4□□□□□ -0.74
HERC3-203ENST00000407637 RPP21Q9H633 154 aaKnown RBP10.4□□□□□ -0.74
HERC3-203ENST00000407637 AP5S1Q9NUS5 200 aa10.4□□□□□ -0.74
HERC3-203ENST00000407637 TMEM140Q9NV12 185 aa10.4□□□□□ -0.74
HERC3-203ENST00000407637 SS18L1O75177 396 aaPredicted RBP10.4□□□□□ -0.74
HERC3-203ENST00000407637 ERVK-16P61578 105 aa10.4□□□□□ -0.74
HERC3-203ENST00000407637 TMEM177Q53S58 311 aa10.4□□□□□ -0.74
HERC3-203ENST00000407637 LINC00322Q6ZN03 302 aaPredicted RBP10.4□□□□□ -0.74
HERC3-203ENST00000407637 YRDCQ86U90 279 aaKnown RBP10.4□□□□□ -0.74
HERC3-203ENST00000407637 ZNF329Q86UD4 541 aa10.4□□□□□ -0.74
HERC3-203ENST00000407637 GCSAMQ8N6F7 178 aa10.4□□□□□ -0.74
HERC3-203ENST00000407637 SLC25A33Q9BSK2 321 aa10.4□□□□□ -0.74
HERC3-203ENST00000407637 SLC25A2Q9BXI2 301 aa10.4□□□□□ -0.74
HERC3-203ENST00000407637 IGLV3-12A0A075B6K2 115 aa10.39□□□□□ -0.75
HERC3-203ENST00000407637 IGHV1OR21-1A0A087WYE8 117 aa10.39□□□□□ -0.75
HERC3-203ENST00000407637 OOEPA6NGQ2 149 aa10.39□□□□□ -0.75
HERC3-203ENST00000407637 MYOD1P15172 320 aa10.39□□□□□ -0.75
HERC3-203ENST00000407637 ACP1P24666 158 aa10.39□□□□□ -0.75
HERC3-203ENST00000407637 HINT2Q9BX68 163 aa10.39□□□□□ -0.75
HERC3-203ENST00000407637 PROK2Q9HC23 129 aa10.39□□□□□ -0.75
HERC3-203ENST00000407637 TRGV8A0A0C4DH27 118 aa10.39□□□□□ -0.75
HERC3-203ENST00000407637 FAM90A9PA6NNJ1 464 aa10.39□□□□□ -0.75
HERC3-203ENST00000407637 SIVA1O15304 175 aa10.39□□□□□ -0.75
HERC3-203ENST00000407637 OR1C1Q15619 314 aa10.39□□□□□ -0.75
HERC3-203ENST00000407637 FAM167A-AS1Q96KT0 104 aa10.39□□□□□ -0.75
HERC3-203ENST00000407637 FSCN3Q9NQT6 498 aa10.39□□□□□ -0.75
HERC3-203ENST00000407637 A0A1W2PRD5 423 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 A0A1W2PRF3 423 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 A0A1W2PRM7 423 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 PROP1O75360 226 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 MT-CO3P00414 261 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 GPR12P47775 334 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 FOXG1P55316 489 aaPredicted RBP10.38□□□□□ -0.75
HERC3-203ENST00000407637 CACNG7P62955 275 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 SHISA2Q6UWI4 295 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 GGNQ86UU5 652 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 DEFB119Q8N690 84 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 PRR33A8MZF0 331 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 F8W1H4 67 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 K7EMI3 77 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 FAM106CPP0CH98 169 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 ERVK11-1P61568 191 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 FAM106AQ4KMX7 169 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 HES3Q5TGS1 186 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 C17orf82Q86X59 251 aaPredicted RBP10.38□□□□□ -0.75
HERC3-203ENST00000407637 COL25A1Q9BXS0 654 aaPredicted RBP10.38□□□□□ -0.75
HERC3-203ENST00000407637 IL23AQ9NPF7 189 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 FAM186AA6NE01 2351 aa10.38□□□□□ -0.75
HERC3-203ENST00000407637 H3BMG7 143 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 CYC1P08574 325 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 CSN1S1P47710 185 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 ZNF146Q15072 292 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 PLXDC1Q8IUK5 500 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 BCL6BQ8N143 479 aaPredicted RBP10.37□□□□□ -0.75
HERC3-203ENST00000407637 OR9G1Q8NH87 305 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 COQ2Q96H96 371 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 ZNF479Q96JC4 524 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 C20orf78Q9BR46 151 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 PGPEP1Q9NXJ5 209 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 PSG8Q9UQ74 426 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 SOX21Q9Y651 276 aaPredicted RBP10.37□□□□□ -0.75
HERC3-203ENST00000407637 FRYLO94915 3013 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 LOXL1Q08397 574 aaPredicted RBP10.37□□□□□ -0.75
HERC3-203ENST00000407637 RBPMS2Q6ZRY4 209 aaKnown RBP10.37□□□□□ -0.75
HERC3-203ENST00000407637 ZNF418Q8TF45 676 aaPredicted RBP10.37□□□□□ -0.75
HERC3-203ENST00000407637 RNF183Q96D59 192 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 ENY2Q9NPA8 101 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 PCSK5Q92824 1860 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 C19orf67A6NJJ6 358 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 C15orf61A6NNL5 157 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 P01737 135 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 B3GALT5-AS1P59052 145 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 RPL39P5Q59GN2 51 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 PHLDA1Q8WV24 401 aaPredicted RBP10.37□□□□□ -0.75
HERC3-203ENST00000407637 CFHR5Q9BXR6 569 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 NHP2Q9NX24 153 aaKnown RBP10.37□□□□□ -0.75
HERC3-203ENST00000407637 B4GALT7Q9UBV7 327 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 POLDIP2Q9Y2S7 368 aa10.37□□□□□ -0.75
HERC3-203ENST00000407637 A0A096LNJ9 63 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 A0A1W2PPC4 97 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 C10orf142B7Z368 130 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 KLRC4-KLRK1H3BQV0 150 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 DNPH1O43598 174 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 DUX1O43812 170 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 IGHV3-13P01766 116 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 MNX1P50219 401 aaPredicted RBP10.36□□□□□ -0.75
HERC3-203ENST00000407637 C8orf86Q6ZUL3 223 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 Q8IYB0 196 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 OR13A1Q8NGR1 328 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 RTL8AQ9BWD3 113 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 SLC25A17O43808 307 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 MLANAQ16655 118 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 AMTNQ6UX39 209 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 DCTN5Q9BTE1 182 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 DUSP23Q9BVJ7 150 aa10.36□□□□□ -0.75
HERC3-203ENST00000407637 SIGLEC8Q9NYZ4 499 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms