RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ERVFRD-1P60508 538 aa10.36□□□□□ -0.75
SMARCB1-203ENST00000407082 C16orf82Q7Z2V1 217 aa10.36□□□□□ -0.75
SMARCB1-203ENST00000407082 C8orf46Q8TAG6 207 aa10.36□□□□□ -0.75
SMARCB1-203ENST00000407082 SSMEM1Q8WWF3 244 aa10.36□□□□□ -0.75
SMARCB1-203ENST00000407082 C12orf57Q99622 126 aa10.36□□□□□ -0.75
SMARCB1-203ENST00000407082 PYGO2Q9BRQ0 406 aa10.36□□□□□ -0.75
SMARCB1-203ENST00000407082 CLEC7AQ9BXN2 247 aa10.36□□□□□ -0.75
SMARCB1-203ENST00000407082 CTSZQ9UBR2 303 aa10.36□□□□□ -0.75
SMARCB1-203ENST00000407082 URGCP-MRPS24S4R325 110 aa10.36□□□□□ -0.75
SMARCB1-203ENST00000407082 MDFIC2A0A1B0GVS7 189 aa10.35□□□□□ -0.75
SMARCB1-203ENST00000407082 PPP5D1E7EU14 171 aa10.35□□□□□ -0.75
SMARCB1-203ENST00000407082 CXCL1P09341 107 aa10.35□□□□□ -0.75
SMARCB1-203ENST00000407082 HOXA5P20719 270 aa10.35□□□□□ -0.75
SMARCB1-203ENST00000407082 S100A2P29034 98 aa10.35□□□□□ -0.75
SMARCB1-203ENST00000407082 BPIFB3P59826 476 aa10.35□□□□□ -0.75
SMARCB1-203ENST00000407082 LMO4P61968 165 aa10.35□□□□□ -0.75
SMARCB1-203ENST00000407082 LCN2P80188 198 aa10.35□□□□□ -0.75
SMARCB1-203ENST00000407082 FAM78BQ5VT40 261 aa10.35□□□□□ -0.75
SMARCB1-203ENST00000407082 SLC16A13Q7RTY0 426 aa10.35□□□□□ -0.75
SMARCB1-203ENST00000407082 OR4P4Q8NGL7 312 aa10.35□□□□□ -0.75
SMARCB1-203ENST00000407082 ABHD5Q8WTS1 349 aa10.35□□□□□ -0.75
SMARCB1-203ENST00000407082 SRSF8Q9BRL6 282 aaKnown RBP10.35□□□□□ -0.75
SMARCB1-203ENST00000407082 INSIG2Q9Y5U4 225 aa10.35□□□□□ -0.75
SMARCB1-203ENST00000407082 TRAV9-1A0A075B6T8 112 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 TGIF2-C20orf24A0A0A6YYL0 155 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 PPIAL4CA0A0B4J2A2 164 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 ENSAO43768 121 aaKnown RBP10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 LIPFP07098 398 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 PFN1P07737 140 aaKnown RBP10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 OR5G3P0C626 314 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 LINC00869P0C866 280 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 PPIAL4GP0DN37 164 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 OR10J1P30954 320 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 CDX1P47902 265 aaPredicted RBP10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 FAM3BP58499 235 aaPredicted RBP10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 UBE2G2P60604 165 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 GAMTQ14353 236 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 UTF1Q5T230 341 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 ZNF343Q6P1L6 599 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 OR2T10Q8NGZ9 312 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 TMEM190Q8WZ59 177 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 C11orf52Q96A22 123 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 ZNF430Q9H8G1 570 aaPredicted RBP10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 PKD1L1Q8TDX9 2849 aa10.34□□□□□ -0.75
SMARCB1-203ENST00000407082 IGHV2-26A0A0B4J1V2 119 aa10.33□□□□□ -0.76
SMARCB1-203ENST00000407082 C9JCJ5 164 aa10.33□□□□□ -0.76
SMARCB1-203ENST00000407082 EIF3GO75821 320 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMARCB1-203ENST00000407082 NDUFB4O95168 129 aa10.33□□□□□ -0.76
SMARCB1-203ENST00000407082 C8orf88P0DMB2 117 aa10.33□□□□□ -0.76
SMARCB1-203ENST00000407082 CEACAM3P40198 252 aa10.33□□□□□ -0.76
SMARCB1-203ENST00000407082 NDUFA6P56556 154 aa10.33□□□□□ -0.76
SMARCB1-203ENST00000407082 GNB1P62873 340 aa10.33□□□□□ -0.76
SMARCB1-203ENST00000407082 PAX2Q02962 417 aa10.33□□□□□ -0.76
SMARCB1-203ENST00000407082 STXBP6Q8NFX7 210 aa10.33□□□□□ -0.76
SMARCB1-203ENST00000407082 OR51G1Q8NGK1 321 aa10.33□□□□□ -0.76
SMARCB1-203ENST00000407082 A0A1W2PRE2 83 aa10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 GGCTO75223 188 aaKnown RBP10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 IGLV2-23P01705 113 aa10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 TRGC2P03986 189 aa10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 RPL27AP46776 148 aaKnown RBP10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 REG1BP48304 166 aa10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 FOXL1Q12952 345 aa10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 GCSAMLQ5JQS6 135 aa10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 LINC01356Q8N9X3 169 aa10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 THAP8Q8NA92 274 aa10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 ZNF114Q8NC26 417 aa10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 OR1L6Q8NGR2 347 aa10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 ZNF418Q8TF45 676 aaPredicted RBP10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 RPEQ96AT9 228 aa10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 DNAJC4Q9NNZ3 241 aa10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 PITPNC1Q9UKF7 332 aa10.32□□□□□ -0.76
SMARCB1-203ENST00000407082 TCRBV4S1A1TA0A5B7 111 aa10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 TMEM89A2RUT3 159 aa10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 BUB1B-PAK6H3BSN5 160 aa10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 M0R1W7 72 aa10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 COX7A2P2O60397 106 aa10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 IGLV1-47P01700 117 aa10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 TYMSP04818 313 aa10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 ATP5G3P48201 142 aa10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 PSG5Q15238 335 aa10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 ZNF841Q6ZN19 808 aa10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 MOB3BQ86TA1 216 aa10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 LINC01551Q86U37 167 aa10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 ACY3Q96HD9 319 aa10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 LPAR2Q9HBW0 351 aa10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 GAR1Q9NY12 217 aaKnown RBP10.31□□□□□ -0.76
SMARCB1-203ENST00000407082 IGHV1-3A0A0C4DH29 117 aa10.3□□□□□ -0.76
SMARCB1-203ENST00000407082 B4DSR2 109 aa10.3□□□□□ -0.76
SMARCB1-203ENST00000407082 SLC25A17O43808 307 aa10.3□□□□□ -0.76
SMARCB1-203ENST00000407082 FCN3O75636 299 aa10.3□□□□□ -0.76
SMARCB1-203ENST00000407082 FABP1P07148 127 aa10.3□□□□□ -0.76
SMARCB1-203ENST00000407082 MYOD1P15172 320 aa10.3□□□□□ -0.76
SMARCB1-203ENST00000407082 PRSS8Q16651 343 aa10.3□□□□□ -0.76
SMARCB1-203ENST00000407082 COX19Q49B96 90 aa10.3□□□□□ -0.76
SMARCB1-203ENST00000407082 C1orf122Q6ZSJ8 110 aa10.3□□□□□ -0.76
SMARCB1-203ENST00000407082 S100A7AQ86SG5 101 aa10.3□□□□□ -0.76
SMARCB1-203ENST00000407082 LY6G5BQ8NDX9 201 aa10.3□□□□□ -0.76
SMARCB1-203ENST00000407082 OR10G8Q8NGN5 311 aa10.3□□□□□ -0.76
SMARCB1-203ENST00000407082 SFRP2Q96HF1 295 aa10.3□□□□□ -0.76
SMARCB1-203ENST00000407082 SSBP3Q9BWW4 388 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms