RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 C9JCJ5 164 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 F5H697 171 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 TGFAP01135 160 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 LHBP01229 141 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 IGKV1-39P01597 117 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 IGKV1D-39P04432 117 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 TRGC1P0CF51 173 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 VDAC2P45880 294 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 HNRNPA3P51991 378 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 GUSBP1Q15486 140 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 SPANXN1Q5VSR9 72 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 KIR3DL3Q8N743 410 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 OR10W1Q8NGF6 305 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 TMEM208Q9BTX3 173 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 NPFFR1Q9GZQ6 430 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 Q9H3A6 140 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 VSIRQ9H7M9 311 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 EPDR1Q9UM22 224 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 ZFP30Q9Y2G7 519 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 UFC1Q9Y3C8 167 aa3.87□□□□□ -1.79
PCDH11X-207ENST00000406881 OR5AL1P0C617 328 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 FOLR2P14207 255 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 GATA2P23769 480 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 GATA3P23771 443 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 GPR183P32249 361 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 EAF1Q96JC9 268 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 DMRTA2Q96SC8 542 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 NUP210LQ5VU65 1888 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 PCDH15Q96QU1 1955 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 TRBV24-1A0A075B6N3 115 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 IGHV3OR16-10A0A075B7F0 116 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 TMSB15BA0A087X1C1 80 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 NPFFO15130 113 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 HBBP68871 147 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 MST1LQ2TV78 715 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 FBXL19-AS1Q494R0 122 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 C10orf55Q5SWW7 151 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 DMRTA1Q5VZB9 504 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 C1orf122Q6ZSJ8 110 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 GTF2H5Q6ZYL4 71 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 SYT8Q8NBV8 401 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 PRSS22Q9GZN4 317 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 RPP21Q9H633 154 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 LRP4O75096 1905 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 MYO7BQ6PIF6 2116 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 IZUMO1RA6ND01 250 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 A6NNC1 897 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 SHISA9B4DS77 424 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 K7EM74 188 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 TMEM50AO95807 157 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 CSN3P07498 182 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 SNRPCP09234 159 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 AREGP15514 252 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 MDKP21741 143 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 ANOS1P23352 680 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 TDGF1P3P51864 188 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 UBE2E1P51965 193 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 CX3CL1P78423 397 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 RHOGP84095 191 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 SPSB3Q6PJ21 355 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 SEM1Q6ZVN7 128 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 CENPVQ7Z7K6 275 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 GSX1Q9H4S2 264 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 SPG11Q96JI7 2443 aa3.86□□□□□ -1.79
PCDH11X-207ENST00000406881 IGKV3-7A0A075B6H7 116 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 HAX1O00165 279 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 SNRPD3P62318 126 aaKnown RBP3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 WFDC3Q8IUB2 231 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 TMEM183AQ8IXX5 376 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 TMEM116Q8NCL8 245 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 PGLYRP4Q96LB8 373 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 NDUFA4L2Q9NRX3 87 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 ADAMTS9Q9P2N4 1935 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 TRAV41A0A0B4J266 112 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 A1L4Q6 167 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 MYOD1P15172 320 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 TWIST1Q15672 202 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 PMCHL1Q16048 86 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 GCSAMLQ5JQS6 135 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 CLEC19AQ6UXS0 136 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 ZNF562Q6V9R5 426 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 TCF24Q7RTU0 167 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 LYPD1Q8N2G4 141 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 C11orf42Q8N5U0 333 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 ASCL2Q99929 193 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 FASNP49327 2511 aaKnown RBP3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 NAV3Q8IVL0 2385 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 ACACBO00763 2458 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 H3BTX0 84 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 IGKV1-16P04430 117 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 C1QTNF9P0C862 333 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 CKS2P33552 79 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 SMAGPQ0VAQ4 97 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 Q5PR19 223 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 TEX38Q6PEX7 206 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 C1QL4Q86Z23 238 aa3.85□□□□□ -1.79
PCDH11X-207ENST00000406881 TRAV40A0A0B4J280 105 aa3.84□□□□□ -1.79
PCDH11X-207ENST00000406881 A0A1B0GUT8 65 aa3.84□□□□□ -1.79
PCDH11X-207ENST00000406881 DIRC3C9JPN6 131 aa3.84□□□□□ -1.79
PCDH11X-207ENST00000406881 PRSS1P07477 247 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms