RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 METRNQ9UJH8 293 aa10.99□□□□□ -0.65
CACNA1C-222ENST00000406454 OR10W1Q8NGF6 305 aa10.99□□□□□ -0.65
CACNA1C-222ENST00000406454 ITLN2Q8WWU7 325 aaPredicted RBP10.99□□□□□ -0.65
CACNA1C-222ENST00000406454 TRBV6-6A0A0A6YYG2 114 aa10.99□□□□□ -0.65
CACNA1C-222ENST00000406454 IGHV2-26A0A0B4J1V2 119 aa10.99□□□□□ -0.65
CACNA1C-222ENST00000406454 HOXA5P20719 270 aa10.99□□□□□ -0.65
CACNA1C-222ENST00000406454 NMSQ5H8A3 153 aa10.99□□□□□ -0.65
CACNA1C-222ENST00000406454 LILRA1O75019 489 aa10.99□□□□□ -0.65
CACNA1C-222ENST00000406454 OSTCQ9NRP0 149 aa10.99□□□□□ -0.65
CACNA1C-222ENST00000406454 MYO7BQ6PIF6 2116 aa10.99□□□□□ -0.65
CACNA1C-222ENST00000406454 TMEM160Q9NX00 188 aa10.99□□□□□ -0.65
CACNA1C-222ENST00000406454 CLDN16Q9Y5I7 305 aa10.99□□□□□ -0.65
CACNA1C-222ENST00000406454 TMEM178BH3BS89 294 aa10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 PAX1P15863 534 aa10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 C10orf55Q5SWW7 151 aa10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 TMEM200BQ69YZ2 307 aa10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 TNFRSF18Q9Y5U5 241 aa10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 IGKV1-5P01602 117 aa10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 IGHV1-8P0DP01 117 aa10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 GREB1Q4ZG55 1949 aa10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 ZNF418Q8TF45 676 aaPredicted RBP10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 TMEM170AQ8WVE7 144 aa10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 FABP5P3A8MUU1 101 aa10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 RNASE4P34096 147 aaKnown RBP10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 SRSF6Q13247 344 aaKnown RBP10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 DUX3Q96PT4 197 aa10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 MLNRO43193 412 aa10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 ATP5LO75964 103 aa10.98□□□□□ -0.65
CACNA1C-222ENST00000406454 A0A1B0GV72 72 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 Q6P435 159 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 ORMDL3Q8N138 153 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 ASCL2Q99929 193 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 PRSS22Q9GZN4 317 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 PEMTQ9UBM1 199 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 CLPSL1A2RUU4 121 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 TCF23Q7RTU1 214 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 GGTLC1Q9BX51 225 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 OCC1Q8TAD7 63 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 PSG8Q9UQ74 426 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 DOCK6Q96HP0 2047 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 MYOD1P15172 320 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 HGFACQ04756 655 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 Q6ZS92 163 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 C5orf24Q7Z6I8 188 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 COPS9Q8WXC6 57 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 YAE1D1Q9NRH1 226 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 SIP14410 1827 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 A0A0G2JNJ9 132 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 PGPEP1LA6NFU8 196 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 Q9UFV3 132 aa10.97□□□□□ -0.65
CACNA1C-222ENST00000406454 EFNA4P52798 201 aa10.96□□□□□ -0.65
CACNA1C-222ENST00000406454 FER1L5A0AVI2 2057 aa10.96□□□□□ -0.65
CACNA1C-222ENST00000406454 TRAV8-6A0A0B4J262 113 aa10.96□□□□□ -0.65
CACNA1C-222ENST00000406454 TMEM170BQ5T4T1 132 aa10.96□□□□□ -0.65
CACNA1C-222ENST00000406454 SCGB3A1Q96QR1 104 aa10.96□□□□□ -0.65
CACNA1C-222ENST00000406454 SCN5AQ14524 2016 aa10.96□□□□□ -0.65
CACNA1C-222ENST00000406454 CD5P06127 495 aa10.96□□□□□ -0.65
CACNA1C-222ENST00000406454 COQ2Q96H96 371 aa10.96□□□□□ -0.65
CACNA1C-222ENST00000406454 ZNF581Q9P0T4 197 aa10.96□□□□□ -0.65
CACNA1C-222ENST00000406454 C8orf46Q8TAG6 207 aa10.96□□□□□ -0.66
CACNA1C-222ENST00000406454 TRAV40A0A0B4J280 105 aa10.96□□□□□ -0.66
CACNA1C-222ENST00000406454 SERF1AO75920 110 aa10.96□□□□□ -0.66
CACNA1C-222ENST00000406454 FAM71F2Q6NXP2 309 aa10.96□□□□□ -0.66
CACNA1C-222ENST00000406454 GAFA1Q96PS6 74 aa10.96□□□□□ -0.66
CACNA1C-222ENST00000406454 FAM19A2Q8N3H0 131 aa10.96□□□□□ -0.66
CACNA1C-222ENST00000406454 TRAV5A0A0B4J249 113 aa10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 VDAC2P45880 294 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 CTAG1AP78358 180 aa10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 ADMP35318 185 aa10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 TEX38Q6PEX7 206 aa10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 TMEM167AQ8TBQ9 72 aa10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 IGHV1-3A0A0C4DH29 117 aa10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 Q6ZS49 121 aa10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 SPTBN1Q01082 2364 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 MED12Q93074 2177 aa10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 PSMB11A5LHX3 300 aa10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 SUMO2P61956 95 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 TMEM14EPQ6UXP3 125 aa10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 WNT2P09544 360 aa10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 SSBP4Q9BWG4 385 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 CACNA1EQ15878 2313 aa10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 MTCL1Q9Y4B5 1905 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 ETV2O00321 342 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-222ENST00000406454 TPTE2P1Q5T6R2 138 aa10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 LINC01587Q99440 93 aa10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 COL4A6Q14031 1691 aa10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 TRAV1-1A0A0B4J248 108 aa10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 A0A1W2PRX2 142 aa10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 RNF5Q99942 180 aa10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 TRPM7Q96QT4 1865 aa10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 TRAV3A0A0B4J244 114 aa10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 C19orf67A6NJJ6 358 aa10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 VMO1Q7Z5L0 202 aa10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 IGKV1D-17A0A075B6S4 117 aa10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 SLC25A20O43772 301 aa10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 SPATA31B1PQ5VZV4 182 aa10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 ZNF474Q6S9Z5 364 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 SLC25A48Q6ZT89 311 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 C14orf144Q96I85 54 aa10.94□□□□□ -0.66
CACNA1C-222ENST00000406454 PRDM13Q9H4Q3 707 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms