RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 A0A0G2JNJ9 132 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 NGFRP08138 427 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 Q9UFV3 132 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 ACACAQ13085 2346 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 DUTP33316 252 aaKnown RBP9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 TCF15Q12870 199 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 PRDM13Q9H4Q3 707 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 TCF19Q9Y242 345 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 IGKV1D-42A0A075B6H8 117 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 A0A0G2JMZ2 1700 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 LRRC37A2A6NM11 1700 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 M0R2P5 195 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 SLC17A3O00476 420 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 ARL14EPLP0DKL9 152 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 FHITP49789 147 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 UBE2V2Q15819 145 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 FGF16O43320 207 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 PGLYRP1O75594 196 aaPredicted RBP9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 NANOS3P60323 173 aaKnown RBP9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 SIGLEC15Q6ZMC9 328 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 RALGAPA2Q2PPJ7 1873 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 TRAV13-1A0A0B4J241 112 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 CRYBB3P26998 211 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 TMEM86BQ8N661 226 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 RMI2Q96E14 147 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 ZNF708P17019 499 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 MPZP25189 248 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 C1orf100Q5SVJ3 147 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 HIST1H2BAQ96A08 127 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 UQCR10Q9UDW1 63 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 LTBP1Q14766 1721 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 A0A1W2PPI3 338 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 UBE2CO00762 179 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 SNRNP200O75643 2136 aaKnown RBP9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 CD5P06127 495 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 C2orf68Q2NKX9 166 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 TMEM158Q8WZ71 300 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 TMEM133Q9H2Q1 129 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 LINC00312Q9Y6C7 94 aa9.16□□□□□ -0.94
CACNA1C-216ENST00000399638 RUSC1-AS1Q66K80 236 aa9.15□□□□□ -0.94
CACNA1C-216ENST00000399638 TDRD15B5MCY1 1934 aaKnown RBP9.15□□□□□ -0.94
CACNA1C-216ENST00000399638 IGHV4-28A0A0C4DH34 117 aa9.15□□□□□ -0.94
CACNA1C-216ENST00000399638 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.15□□□□□ -0.94
CACNA1C-216ENST00000399638 RNF182Q8N6D2 247 aa9.15□□□□□ -0.94
CACNA1C-216ENST00000399638 SNHG12Q9BXW3 62 aa9.15□□□□□ -0.94
CACNA1C-216ENST00000399638 VCX2Q9H322 139 aa9.15□□□□□ -0.94
CACNA1C-216ENST00000399638 CYB561D1Q8N8Q1 229 aa9.15□□□□□ -0.94
CACNA1C-216ENST00000399638 THAP8Q8NA92 274 aa9.15□□□□□ -0.94
CACNA1C-216ENST00000399638 CACNA1HO95180 2353 aa9.15□□□□□ -0.94
CACNA1C-216ENST00000399638 DDTP30046 118 aa9.15□□□□□ -0.94
CACNA1C-216ENST00000399638 PRR30Q53SZ7 412 aaPredicted RBP9.15□□□□□ -0.94
CACNA1C-216ENST00000399638 A0A1B0GTI1 187 aa9.15□□□□□ -0.95
CACNA1C-216ENST00000399638 ZNF561-AS1K7EIQ3 104 aa9.15□□□□□ -0.95
CACNA1C-216ENST00000399638 LGALS1P09382 135 aaKnown RBP9.15□□□□□ -0.95
CACNA1C-216ENST00000399638 ST20Q9HBF5 79 aa9.15□□□□□ -0.95
CACNA1C-216ENST00000399638 KLHDC2Q9Y2U9 406 aa9.15□□□□□ -0.95
CACNA1C-216ENST00000399638 MCM3APO60318 1980 aa9.15□□□□□ -0.95
CACNA1C-216ENST00000399638 SHISA3A0PJX4 238 aa9.15□□□□□ -0.95
CACNA1C-216ENST00000399638 A6NNC1 897 aa9.15□□□□□ -0.95
CACNA1C-216ENST00000399638 MSMBP08118 114 aa9.15□□□□□ -0.95
CACNA1C-216ENST00000399638 IFI27P40305 119 aaPredicted RBP9.15□□□□□ -0.95
CACNA1C-216ENST00000399638 TRAV5A0A0B4J249 113 aa9.14□□□□□ -0.95
CACNA1C-216ENST00000399638 GPX4P36969 197 aaPredicted RBP9.14□□□□□ -0.95
CACNA1C-216ENST00000399638 PEF1Q9UBV8 284 aaKnown RBP9.14□□□□□ -0.95
CACNA1C-216ENST00000399638 SCRT1Q9BWW7 348 aa9.14□□□□□ -0.95
CACNA1C-216ENST00000399638 MDC1Q14676 2089 aaKnown RBP9.14□□□□□ -0.95
CACNA1C-216ENST00000399638 K7ENP7 123 aa9.14□□□□□ -0.95
CACNA1C-216ENST00000399638 OSR1Q8TAX0 266 aaPredicted RBP9.14□□□□□ -0.95
CACNA1C-216ENST00000399638 FAM19A2Q8N3H0 131 aa9.14□□□□□ -0.95
CACNA1C-216ENST00000399638 IMMP2LQ96T52 175 aa9.14□□□□□ -0.95
CACNA1C-216ENST00000399638 IGHV4-4A0A075B6R2 117 aa9.14□□□□□ -0.95
CACNA1C-216ENST00000399638 IGHV1-18A0A0C4DH31 117 aa9.14□□□□□ -0.95
CACNA1C-216ENST00000399638 FCN3O75636 299 aa9.14□□□□□ -0.95
CACNA1C-216ENST00000399638 FOXF2Q12947 444 aa9.14□□□□□ -0.95
CACNA1C-216ENST00000399638 ZNF236Q9UL36 1845 aa9.14□□□□□ -0.95
CACNA1C-216ENST00000399638 SMIM8Q96KF7 97 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 SPATA25Q9BR10 227 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 MRPL32Q9BYC8 188 aaKnown RBP9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 A0A1W2PP11 408 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 OR9G9P0C7N8 305 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 ROS1P08922 2347 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 A0A1B0GW15 77 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 UCP1P25874 307 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 GAS1P54826 345 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 MYO16Q9Y6X6 1858 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 F8VVB4 439 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 F8VWA3 439 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 ZFAND6Q6FIF0 208 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 PLSCR4Q9NRQ2 329 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 KLF2Q9Y5W3 355 aaPredicted RBP9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 MIA3Q5JRA6 1907 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 LY6HO94772 140 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 SERF2P84101 59 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 ATXN8Q156A1 80 aa9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 CHCHD2Q9Y6H1 151 aaPredicted RBP9.13□□□□□ -0.95
CACNA1C-216ENST00000399638 A0A087WWC5 75 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 LINC01619G3V211 115 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 J3QRE1 110 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 UMODP07911 640 aa9.12□□□□□ -0.95
CACNA1C-216ENST00000399638 PRCDQ00LT1 54 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms