RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 IGLL1P15814 213 aa9.46□□□□□ -0.9
HLA-DQB1-203ENST00000399082 NPBWR1P48145 328 aa9.46□□□□□ -0.9
HLA-DQB1-203ENST00000399082 ADAMTSL5Q6ZMM2 481 aa9.46□□□□□ -0.9
HLA-DQB1-203ENST00000399082 REC114Q7Z4M0 266 aa9.46□□□□□ -0.9
HLA-DQB1-203ENST00000399082 TMEM252Q8N6L7 170 aa9.46□□□□□ -0.9
HLA-DQB1-203ENST00000399082 CACNG8Q8WXS5 425 aa9.46□□□□□ -0.9
HLA-DQB1-203ENST00000399082 ACY3Q96HD9 319 aa9.46□□□□□ -0.9
HLA-DQB1-203ENST00000399082 RCC1LQ96I51 464 aaKnown RBP9.46□□□□□ -0.9
HLA-DQB1-203ENST00000399082 MBD2Q9UBB5 411 aa9.46□□□□□ -0.9
HLA-DQB1-203ENST00000399082 WIPF1O43516 503 aa9.45□□□□□ -0.9
HLA-DQB1-203ENST00000399082 CST7O76096 145 aa9.45□□□□□ -0.9
HLA-DQB1-203ENST00000399082 CD33P20138 364 aa9.45□□□□□ -0.9
HLA-DQB1-203ENST00000399082 CAV2P51636 162 aa9.45□□□□□ -0.9
HLA-DQB1-203ENST00000399082 TIGITQ495A1 244 aa9.45□□□□□ -0.9
HLA-DQB1-203ENST00000399082 ETFRF1Q6IPR1 90 aa9.45□□□□□ -0.9
HLA-DQB1-203ENST00000399082 TMEM190Q8WZ59 177 aa9.45□□□□□ -0.9
HLA-DQB1-203ENST00000399082 ZFAND3Q9H8U3 227 aa9.45□□□□□ -0.9
HLA-DQB1-203ENST00000399082 GAR1Q9NY12 217 aaKnown RBP9.45□□□□□ -0.9
HLA-DQB1-203ENST00000399082 IGHV3OR16-8A0A075B7F1 116 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 TMEM213A2RRL7 107 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 A8MWP6 167 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 E5RGE8 158 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 LGALS9O00182 355 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 NDUFA4O00483 81 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 NUPL2O15504 423 aaKnown RBP9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 CSN3P07498 182 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 PVALBP20472 110 aaPredicted RBP9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 OR10J1P30954 320 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 P2RY1P47900 373 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 BCAP31P51572 246 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 DLK1P80370 383 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 OXLD1Q5BKU9 147 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 SAMD5Q5TGI4 173 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 THAP8Q8NA92 274 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 OR9G4Q8NGQ1 327 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 SLC35E1Q96K37 410 aa9.44□□□□□ -0.9
HLA-DQB1-203ENST00000399082 NBEAL1Q6ZS30 2694 aa9.43□□□□□ -0.9
HLA-DQB1-203ENST00000399082 A0A1B0GVG6 124 aa9.43□□□□□ -0.9
HLA-DQB1-203ENST00000399082 G3V4G9 280 aa9.43□□□□□ -0.9
HLA-DQB1-203ENST00000399082 RLN2P04090 185 aa9.43□□□□□ -0.9
HLA-DQB1-203ENST00000399082 SULT1A1P50225 295 aa9.43□□□□□ -0.9
HLA-DQB1-203ENST00000399082 RAP2BP61225 183 aa9.43□□□□□ -0.9
HLA-DQB1-203ENST00000399082 EWSR1Q01844 656 aaKnown RBP eCLIP9.43□□□□□ -0.9
HLA-DQB1-203ENST00000399082 NHLH2Q02577 135 aa9.43□□□□□ -0.9
HLA-DQB1-203ENST00000399082 SLC38A11Q08AI6 406 aa9.43□□□□□ -0.9
HLA-DQB1-203ENST00000399082 TOMM20LQ6UXN7 152 aa9.43□□□□□ -0.9
HLA-DQB1-203ENST00000399082 ZNF600Q6ZNG1 722 aa9.43□□□□□ -0.9
HLA-DQB1-203ENST00000399082 OR10P1Q8NGE3 313 aa9.43□□□□□ -0.9
HLA-DQB1-203ENST00000399082 ASB13Q8WXK3 278 aa9.43□□□□□ -0.9
HLA-DQB1-203ENST00000399082 C2orf70A6NJV1 201 aa9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 SEC14L6B5MCN3 397 aa9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 FNDC10F2Z333 226 aa9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 SMLR1H3BR10 107 aa9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 SCAF4O95104 1147 aaKnown RBP9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 YPEL3P61236 119 aaPredicted RBP9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 ZNF90Q03938 601 aa9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 RELQ04864 619 aaPredicted RBP9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 VWC2Q2TAL6 325 aa9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 FAM106AQ4KMX7 169 aa9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 TM4SF20Q53R12 229 aa9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 TMEM182Q6ZP80 229 aaPredicted RBP9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 TMEM144Q7Z5S9 345 aa9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 TMEM217Q8N7C4 229 aa9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 OR1S2Q8NGQ3 325 aa9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 PUS1Q9Y606 427 aaKnown RBP eCLIP9.42□□□□□ -0.9
HLA-DQB1-203ENST00000399082 NOTCH1P46531 2555 aa9.41□□□□□ -0.9
HLA-DQB1-203ENST00000399082 hCG_2014768A0A024R1R8 64 aa9.41□□□□□ -0.9
HLA-DQB1-203ENST00000399082 TRAV30A0A087WSZ9 112 aa9.41□□□□□ -0.9
HLA-DQB1-203ENST00000399082 ZNF320A2RRD8 509 aa9.41□□□□□ -0.9
HLA-DQB1-203ENST00000399082 ZNF207O43670 478 aaKnown RBP9.41□□□□□ -0.9
HLA-DQB1-203ENST00000399082 PET100P0DJ07 73 aa9.41□□□□□ -0.9
HLA-DQB1-203ENST00000399082 C8orf88P0DMB2 117 aa9.41□□□□□ -0.9
HLA-DQB1-203ENST00000399082 OR2T35Q8NGX2 323 aa9.41□□□□□ -0.9
HLA-DQB1-203ENST00000399082 TRGV9Q99603 122 aa9.41□□□□□ -0.9
HLA-DQB1-203ENST00000399082 GGACTQ9BVM4 153 aa9.41□□□□□ -0.9
HLA-DQB1-203ENST00000399082 SIGLEC8Q9NYZ4 499 aa9.41□□□□□ -0.9
HLA-DQB1-203ENST00000399082 LSM4Q9Y4Z0 139 aaKnown RBP9.41□□□□□ -0.9
HLA-DQB1-203ENST00000399082 SMCO3A2RU48 225 aa9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 ZFP92A6NM28 416 aa9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 SAP30O75446 220 aa9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 TOMM40O96008 361 aa9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 PSG1P11464 419 aa9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 FOLR2P14207 255 aa9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 CBLN1P23435 193 aa9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 RPL12P30050 165 aaKnown RBP9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 ELLP55199 621 aaPredicted RBP9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 AKR1C1Q04828 323 aa9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 USF2Q15853 346 aaPredicted RBP9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 KPRPQ5T749 579 aaPredicted RBP9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 C9orf66Q5T8R8 295 aa9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 STX12Q86Y82 276 aa9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 ST6GAL2Q96JF0 529 aa9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 MCRIP2Q9BUT9 160 aaKnown RBP9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 WDR83OSQ9Y284 106 aa9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 HSPB11Q9Y547 144 aa9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 SELENOKQ9Y6D0 94 aa9.4□□□□□ -0.9
HLA-DQB1-203ENST00000399082 WI2-2373I1.2A0A1W2PRP0 233 aa9.39□□□□□ -0.91
HLA-DQB1-203ENST00000399082 RNF222A6NCQ9 220 aa9.39□□□□□ -0.91
HLA-DQB1-203ENST00000399082 K7EMT4 169 aa9.39□□□□□ -0.91
HLA-DQB1-203ENST00000399082 YIF1AO95070 293 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms