RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 TRAV25A0A0B4J276 109 aa10.54□□□□□ -0.72
HLA-DQB1-202ENST00000399079 IGHV3-66A0A0C4DH42 116 aa10.54□□□□□ -0.72
HLA-DQB1-202ENST00000399079 WRBO00258 174 aa10.54□□□□□ -0.72
HLA-DQB1-202ENST00000399079 TSPAN4O14817 238 aa10.54□□□□□ -0.72
HLA-DQB1-202ENST00000399079 SYNGR2O43760 224 aa10.54□□□□□ -0.72
HLA-DQB1-202ENST00000399079 SLC16A13Q7RTY0 426 aa10.54□□□□□ -0.72
HLA-DQB1-202ENST00000399079 LILRB2Q8N423 598 aa10.54□□□□□ -0.72
HLA-DQB1-202ENST00000399079 GINS3Q9BRX5 216 aa10.54□□□□□ -0.72
HLA-DQB1-202ENST00000399079 PAIP2BQ9ULR5 123 aaKnown RBP10.54□□□□□ -0.72
HLA-DQB1-202ENST00000399079 IGKV3-7A0A075B6H7 116 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 TRAV30A0A087WSZ9 112 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 FAM240BA0A1B0GVZ2 78 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 IFNA21P01568 189 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 OR10J1P30954 320 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 IFITM3Q01628 133 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 ZNF846Q147U1 533 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 LAMTOR1Q6IAA8 161 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 ETFRF1Q6IPR1 90 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 MITD1Q8WV92 249 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 ST8SIA2Q92186 375 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 SEC22CQ9BRL7 303 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 WDR12Q9GZL7 423 aaKnown RBP10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 U3KQK5 164 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 H3BP45 60 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 MED6O75586 246 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 UPK1BO75841 260 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 POLR2GP62487 172 aaKnown RBP eCLIP10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 ID3Q02535 119 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 ASAH1Q13510 395 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 HAGHQ16775 308 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 OR4D5Q8NGN0 318 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 OR1S2Q8NGQ3 325 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 SPAG8Q99932 426 aaPredicted RBP10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 SRD5A3Q9H8P0 318 aa10.53□□□□□ -0.72
HLA-DQB1-202ENST00000399079 TENM3Q9P273 2699 aa10.52□□□□□ -0.72
HLA-DQB1-202ENST00000399079 STAB2Q8WWQ8 2551 aa10.52□□□□□ -0.72
HLA-DQB1-202ENST00000399079 NBEAL2Q6ZNJ1 2754 aa10.52□□□□□ -0.73
HLA-DQB1-202ENST00000399079 RBMY1BA6NDE4 496 aaKnown RBP10.52□□□□□ -0.73
HLA-DQB1-202ENST00000399079 RBMY1EA6NEQ0 496 aaKnown RBP10.52□□□□□ -0.73
HLA-DQB1-202ENST00000399079 CCSO14618 274 aa10.52□□□□□ -0.73
HLA-DQB1-202ENST00000399079 SCGB2A1O75556 95 aa10.52□□□□□ -0.73
HLA-DQB1-202ENST00000399079 H2AFB2P0C5Z0 115 aa10.52□□□□□ -0.73
HLA-DQB1-202ENST00000399079 RBMY1DP0C7P1 496 aaKnown RBP10.52□□□□□ -0.73
HLA-DQB1-202ENST00000399079 ATP5IP56385 69 aaPredicted RBP10.52□□□□□ -0.73
HLA-DQB1-202ENST00000399079 GAMTQ14353 236 aa10.52□□□□□ -0.73
HLA-DQB1-202ENST00000399079 MZT2BQ6NZ67 158 aa10.52□□□□□ -0.73
HLA-DQB1-202ENST00000399079 CIB3Q96Q77 187 aaPredicted RBP10.52□□□□□ -0.73
HLA-DQB1-202ENST00000399079 UBQLN2Q9UHD9 624 aa10.52□□□□□ -0.73
HLA-DQB1-202ENST00000399079 NPPCP23582 126 aa10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 NKX2-1P43699 371 aaPredicted RBP10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 TFPI2P48307 235 aa10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 YPEL3P61236 119 aaPredicted RBP10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 RAB11AP62491 216 aa10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 IAH1Q2TAA2 248 aaPredicted RBP10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 SPANXN5Q5MJ07 72 aa10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 FAM90A2PQ658T7 463 aa10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 LINC00322Q6ZN03 302 aaPredicted RBP10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 GBGT1Q8N5D6 347 aa10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 RCHY1Q96PM5 261 aa10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 CITED4Q96RK1 184 aa10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 TM2D3Q9BRN9 247 aa10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 VSIRQ9H7M9 311 aa10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 GSKIPQ9P0R6 139 aa10.51□□□□□ -0.73
HLA-DQB1-202ENST00000399079 SSSCA1O60232 199 aa10.5□□□□□ -0.73
HLA-DQB1-202ENST00000399079 DFFBO76075 338 aa10.5□□□□□ -0.73
HLA-DQB1-202ENST00000399079 SCGB1D2O95969 90 aa10.5□□□□□ -0.73
HLA-DQB1-202ENST00000399079 CRYBB3P26998 211 aa10.5□□□□□ -0.73
HLA-DQB1-202ENST00000399079 GPX4P36969 197 aaPredicted RBP10.5□□□□□ -0.73
HLA-DQB1-202ENST00000399079 TCF24Q7RTU0 167 aa10.5□□□□□ -0.73
HLA-DQB1-202ENST00000399079 ZNF431Q8TF32 576 aaPredicted RBP10.5□□□□□ -0.73
HLA-DQB1-202ENST00000399079 Q8WTZ3 238 aa10.5□□□□□ -0.73
HLA-DQB1-202ENST00000399079 METTL26Q96S19 204 aa10.5□□□□□ -0.73
HLA-DQB1-202ENST00000399079 ZMAT4Q9H898 229 aa10.5□□□□□ -0.73
HLA-DQB1-202ENST00000399079 IGKV1D-37A0A075B6S9 117 aa10.49□□□□□ -0.73
HLA-DQB1-202ENST00000399079 PRSS46E5RG02 174 aa10.49□□□□□ -0.73
HLA-DQB1-202ENST00000399079 IL4P05112 153 aa10.49□□□□□ -0.73
HLA-DQB1-202ENST00000399079 RD3LP0DJH9 198 aa10.49□□□□□ -0.73
HLA-DQB1-202ENST00000399079 PSG1P11464 419 aa10.49□□□□□ -0.73
HLA-DQB1-202ENST00000399079 ZNF90Q03938 601 aa10.49□□□□□ -0.73
HLA-DQB1-202ENST00000399079 USF2Q15853 346 aaPredicted RBP10.49□□□□□ -0.73
HLA-DQB1-202ENST00000399079 ODF3L2Q3SX64 289 aa10.49□□□□□ -0.73
HLA-DQB1-202ENST00000399079 ZBTB8BQ8NAP8 495 aaPredicted RBP10.49□□□□□ -0.73
HLA-DQB1-202ENST00000399079 SLC35E1Q96K37 410 aa10.49□□□□□ -0.73
HLA-DQB1-202ENST00000399079 IGKV1OR2-108A0A075B7D4 117 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 OR4C46A6NHA9 309 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 ZFP92A6NM28 416 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 FAM25EA8MYX2 175 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 TOMM40O96008 361 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 PAX9P55771 341 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 RPL11P62913 178 aaKnown RBP10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 RPP30P78346 268 aaKnown RBP10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 WFDC3Q8IUB2 231 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 C12orf45Q8N5I9 185 aaPredicted RBP10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 ENKURQ8TC29 256 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 WWC2-AS2Q96NR7 200 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 PSENENQ9NZ42 101 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 BOLA1Q9Y3E2 137 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 STRAPQ9Y3F4 350 aaKnown RBP10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 BMI1P35226 326 aa10.48□□□□□ -0.73
HLA-DQB1-202ENST00000399079 ZNF124Q15973 351 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms