RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 CSN1S1P47710 185 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 UBE2L3P68036 154 aaKnown RBP12.31□□□□□ -0.44
CYLD-202ENST00000398568 EIF4EBP1Q13541 118 aaPredicted RBP12.31□□□□□ -0.44
CYLD-202ENST00000398568 TMUB1Q9BVT8 246 aa12.31□□□□□ -0.44
CYLD-202ENST00000398568 ZZEF1O43149 2961 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 DSPP15924 2871 aaKnown RBP12.3□□□□□ -0.44
CYLD-202ENST00000398568 MGAQ8IWI9 3026 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 A0A1B0GXF2 115 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 OR10D3Q8NH80 312 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 FAM234AQ9H0X4 552 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 TCF19Q9Y242 345 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 ANKRD11Q6UB99 2663 aaPredicted RBP12.3□□□□□ -0.44
CYLD-202ENST00000398568 A6NJY4 79 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 CXCL13O43927 109 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 C8orf88P0DMB2 117 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 LIFP15018 202 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 Q6ZR03 302 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 Q8IYB0 196 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 TEX45Q8NA69 505 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 HINT2Q9BX68 163 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 CACNA1DQ01668 2161 aa12.3□□□□□ -0.44
CYLD-202ENST00000398568 OOEPA6NGQ2 149 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 SMAD7O15105 426 aaKnown RBP12.29□□□□□ -0.44
CYLD-202ENST00000398568 DUX1O43812 170 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 PLGLB1Q02325 96 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 TMEM116Q8NCL8 245 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 C1orf159Q96HA4 380 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 A8MWL6 223 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 DNPH1O43598 174 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 TCTAP57738 103 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 PGLYRP4Q96LB8 373 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 POLDIP2Q9Y2S7 368 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 SOX21Q9Y651 276 aaPredicted RBP12.29□□□□□ -0.44
CYLD-202ENST00000398568 IGHV3-43A0A0B4J1X8 118 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 FAM90A9PA6NNJ1 464 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 KLF7O75840 302 aaPredicted RBP12.29□□□□□ -0.44
CYLD-202ENST00000398568 IGHV3-43DP0DP04 118 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 FOXC1Q12948 553 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 DPF1Q92782 380 aa12.29□□□□□ -0.44
CYLD-202ENST00000398568 DEFB108AA8MXU0 73 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 VKORC1L1Q8N0U8 176 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 ZNF503Q96F45 646 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 PRRC2CQ9Y520 2896 aaKnown RBP12.28□□□□□ -0.44
CYLD-202ENST00000398568 CCL4P13236 92 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 HES3Q5TGS1 186 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 FER1L6-AS2Q96M78 137 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 VGLL1Q99990 258 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 SPATA25Q9BR10 227 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 C19orf24Q9BVV8 132 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 AP5S1Q9NUS5 200 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 LOXL2Q9Y4K0 774 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 ACACBO00763 2458 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 PEX7O00628 323 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 FGF6P10767 208 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 PLP2Q04941 152 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 BOD1L2Q8IYS8 172 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 OR8A1Q8NGG7 326 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 RTL8AQ9BWD3 113 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 LINC00470Q9BZP3 86 aa12.28□□□□□ -0.44
CYLD-202ENST00000398568 ZNF716A6NP11 495 aa12.27□□□□□ -0.44
CYLD-202ENST00000398568 SIVA1O15304 175 aa12.27□□□□□ -0.44
CYLD-202ENST00000398568 WISP2O76076 250 aa12.27□□□□□ -0.44
CYLD-202ENST00000398568 IGHV3-7P01780 117 aa12.27□□□□□ -0.44
CYLD-202ENST00000398568 NDFIP1Q9BT67 221 aa12.27□□□□□ -0.44
CYLD-202ENST00000398568 BOD1L1Q8NFC6 3051 aa12.27□□□□□ -0.45
CYLD-202ENST00000398568 ZADH2Q8N4Q0 377 aa12.27□□□□□ -0.45
CYLD-202ENST00000398568 DAZAP1Q96EP5 407 aaKnown RBP12.27□□□□□ -0.45
CYLD-202ENST00000398568 CCL3P10147 92 aa12.27□□□□□ -0.45
CYLD-202ENST00000398568 GCSHP23434 173 aa12.27□□□□□ -0.45
CYLD-202ENST00000398568 DUTP33316 252 aaKnown RBP12.27□□□□□ -0.45
CYLD-202ENST00000398568 OR1C1Q15619 314 aa12.27□□□□□ -0.45
CYLD-202ENST00000398568 TM4SF20Q53R12 229 aa12.27□□□□□ -0.45
CYLD-202ENST00000398568 YRDCQ86U90 279 aaKnown RBP12.27□□□□□ -0.45
CYLD-202ENST00000398568 ZNF747Q9BV97 191 aa12.27□□□□□ -0.45
CYLD-202ENST00000398568 ZNF883P0CG24 379 aa12.26□□□□□ -0.45
CYLD-202ENST00000398568 C17orf82Q86X59 251 aaPredicted RBP12.26□□□□□ -0.45
CYLD-202ENST00000398568 PRSS3P2Q8NHM4 247 aa12.26□□□□□ -0.45
CYLD-202ENST00000398568 RFESDQ8TAC1 157 aa12.26□□□□□ -0.45
CYLD-202ENST00000398568 RPP21Q9H633 154 aaKnown RBP12.26□□□□□ -0.45
CYLD-202ENST00000398568 OCIAD1Q9NX40 245 aa12.26□□□□□ -0.45
CYLD-202ENST00000398568 VWC2LB2RUY7 222 aa12.26□□□□□ -0.45
CYLD-202ENST00000398568 APOHP02749 345 aaPredicted RBP12.26□□□□□ -0.45
CYLD-202ENST00000398568 FCGR2BP31994 310 aaPredicted RBP12.26□□□□□ -0.45
CYLD-202ENST00000398568 IGLV3-12A0A075B6K2 115 aa12.25□□□□□ -0.45
CYLD-202ENST00000398568 IGHV3-64DA0A0J9YX35 117 aa12.25□□□□□ -0.45
CYLD-202ENST00000398568 IGHV5-10-1A0A0J9YXX1 117 aa12.25□□□□□ -0.45
CYLD-202ENST00000398568 MRPL33O75394 65 aaKnown RBP12.25□□□□□ -0.45
CYLD-202ENST00000398568 NMUP48645 174 aa12.25□□□□□ -0.45
CYLD-202ENST00000398568 TMEM140Q9NV12 185 aa12.25□□□□□ -0.45
CYLD-202ENST00000398568 F11RQ9Y624 299 aaKnown RBP12.25□□□□□ -0.45
CYLD-202ENST00000398568 TRAV3A0A0B4J244 114 aa12.25□□□□□ -0.45
CYLD-202ENST00000398568 F8W1H4 67 aa12.25□□□□□ -0.45
CYLD-202ENST00000398568 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.25□□□□□ -0.45
CYLD-202ENST00000398568 AGFG2O95081 481 aa12.25□□□□□ -0.45
CYLD-202ENST00000398568 P01737 135 aa12.25□□□□□ -0.45
CYLD-202ENST00000398568 FOXF2Q12947 444 aa12.25□□□□□ -0.45
CYLD-202ENST00000398568 LINC00696Q6ZRV3 163 aa12.25□□□□□ -0.45
CYLD-202ENST00000398568 MRPL16Q9NX20 251 aaKnown RBP12.25□□□□□ -0.45
CYLD-202ENST00000398568 FER1L5A0AVI2 2057 aa12.25□□□□□ -0.45
CYLD-202ENST00000398568 PIEZO2Q9H5I5 2752 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms