RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SERTAD4Q9NUC0 356 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 MGAM2Q2M2H8 2515 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 HYPMO75409 117 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 LINC00869P0C866 280 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 DMRTC1Q5HYR2 192 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 C9orf139Q6ZV77 190 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 BSCL2Q96G97 398 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-206ENST00000397617 GFRA4Q9GZZ7 299 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 MEGF9Q9H1U4 602 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 TMPRSS5Q9H3S3 457 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 ZNF492Q9P255 531 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 SH3BGRL2Q9UJC5 107 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 IGHV2-70DA0A0C4DH43 119 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 LINC01549A6NIU2 74 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 NCBP2LA6PVI3 153 aaKnown RBP4.72□□□□□ -1.65
PTPRD-206ENST00000397617 C1QL1O75973 258 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 UQCRFS1P47985 274 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 RPS16P62249 146 aaKnown RBP4.72□□□□□ -1.65
PTPRD-206ENST00000397617 WT1-ASQ06250 92 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 PSG5Q15238 335 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 VWC2LB2RUY7 222 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 H0Y8G0 127 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 HIST1H1EP10412 219 aaKnown RBP4.72□□□□□ -1.65
PTPRD-206ENST00000397617 GCHFRP30047 84 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 LMO4P61968 165 aa4.71□□□□□ -1.65
PTPRD-206ENST00000397617 RUNX1Q01196 453 aa4.71□□□□□ -1.65
PTPRD-206ENST00000397617 C22orf34Q6ZV56 151 aa4.71□□□□□ -1.65
PTPRD-206ENST00000397617 CA2P00918 260 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 FOXA3P55318 350 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-206ENST00000397617 RPL39P5Q59GN2 51 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 USMG5Q96IX5 58 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 PLA2G2EQ9NZK7 142 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 ADGRG4Q8IZF6 3080 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 AP4M1O00189 453 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 IGKV1-16P04430 117 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 VHLLQ6RSH7 139 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 PARLQ9H300 379 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 ZNF355PQ9NSJ1 428 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 BEX4Q9NWD9 120 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-206ENST00000397617 PLA2G5P39877 138 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 TMEM86BQ8N661 226 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 DEFB108BQ8NET1 73 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 TMEM170AQ8WVE7 144 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 TMEM18Q96B42 140 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 TIMM8BQ9Y5J9 83 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-206ENST00000397617 ZZEF1O43149 2961 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 UBE2CO00762 179 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 CNIH1O95406 144 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 IGF1P05019 195 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 UBE2G1P62253 170 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 B4DSR2 109 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 TNFSF12O43508 249 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 IGLV2-23P01705 113 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 GYPAP02724 150 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 G0S2P27469 103 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 MYCNOSP40205 109 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 ELLP55199 621 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-206ENST00000397617 PAX8Q06710 450 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 VMO1Q7Z5L0 202 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 EAF1Q96JC9 268 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-206ENST00000397617 FAM210BQ96KR6 192 aa4.71□□□□□ -1.66
PTPRD-206ENST00000397617 ZNF331Q9NQX6 463 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-206ENST00000397617 SAPCD1Q5SSQ6 148 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 TTC9CQ8N5M4 171 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 MBD6Q96DN6 1003 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 C5orf52A6NGY3 159 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 K7ERU9 68 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 IGLC1P0CG04 106 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 OR13C7P0DN81 318 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 CLEC2AQ6UVW9 174 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 ZNF600Q6ZNG1 722 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 MGST2Q99735 147 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 SIRPDQ9H106 197 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 TNFRSF19Q9NS68 423 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 TEP1Q99973 2627 aaKnown RBP4.7□□□□□ -1.66
PTPRD-206ENST00000397617 REG1AP05451 166 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 SMIM17P0DL12 118 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 PMCHP20382 165 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 RPL24P83731 157 aaKnown RBP4.7□□□□□ -1.66
PTPRD-206ENST00000397617 HOXA4Q00056 320 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-206ENST00000397617 A0A0G2JLM5 398 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 ZNF705FA8MVS1 300 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-206ENST00000397617 IGKV1D-33P01593 117 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 IGKV1-33P01594 117 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 ZNF705DP0CH99 300 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-206ENST00000397617 ZNF705BP0CI00 300 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-206ENST00000397617 IAPPP10997 89 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 HNF1AP20823 631 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 CNN1P51911 297 aaKnown RBP4.7□□□□□ -1.66
PTPRD-206ENST00000397617 TPRX1Q8N7U7 411 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 FAM122AQ96E09 287 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 SLC50A1Q9BRV3 221 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 DCAF16Q9NXF7 216 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 MXRA5Q9NR99 2828 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 MFAP4P55083 255 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 FAM110DQ8TAY7 271 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-206ENST00000397617 CRYBA1P05813 215 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 HOXB4P17483 251 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-206ENST00000397617 CEBPDP49716 269 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-206ENST00000397617 TEX38Q6PEX7 206 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms