RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ZNF702PQ9H963 129 aa14.89□□□□□ -0.03
TSPAN4-204ENST00000397404 SLC39A9Q9NUM3 307 aa14.89□□□□□ -0.03
TSPAN4-204ENST00000397404 PFDN2Q9UHV9 154 aa14.89□□□□□ -0.03
TSPAN4-204ENST00000397404 RNF24Q9Y225 148 aa14.89□□□□□ -0.03
TSPAN4-204ENST00000397404 IGKV1OR2-108A0A075B7D4 117 aa14.88□□□□□ -0.03
TSPAN4-204ENST00000397404 ELOA3CA0A087WX78 387 aaPredicted RBP14.88□□□□□ -0.03
TSPAN4-204ENST00000397404 TRAV1-1A0A0B4J248 108 aa14.88□□□□□ -0.03
TSPAN4-204ENST00000397404 SH2D7A6NKC9 451 aaPredicted RBP14.88□□□□□ -0.03
TSPAN4-204ENST00000397404 GNG7O60262 68 aa14.88□□□□□ -0.03
TSPAN4-204ENST00000397404 OR2J3O76001 311 aa14.88□□□□□ -0.03
TSPAN4-204ENST00000397404 ELANEP08246 267 aa14.88□□□□□ -0.03
TSPAN4-204ENST00000397404 IGLC1P0CG04 106 aa14.88□□□□□ -0.03
TSPAN4-204ENST00000397404 YPEL3P61236 119 aaPredicted RBP14.88□□□□□ -0.03
TSPAN4-204ENST00000397404 ATP5G2Q06055 141 aa14.88□□□□□ -0.03
TSPAN4-204ENST00000397404 C15orf32Q32M92 178 aa14.88□□□□□ -0.03
TSPAN4-204ENST00000397404 SPSB3Q6PJ21 355 aa14.88□□□□□ -0.03
TSPAN4-204ENST00000397404 GATAD1Q8WUU5 269 aa14.88□□□□□ -0.03
TSPAN4-204ENST00000397404 ACTR3CQ9C0K3 210 aaPredicted RBP14.88□□□□□ -0.03
TSPAN4-204ENST00000397404 SEC14L6B5MCN3 397 aa14.87□□□□□ -0.03
TSPAN4-204ENST00000397404 PLP1P60201 277 aa14.87□□□□□ -0.03
TSPAN4-204ENST00000397404 MLANAQ16655 118 aa14.87□□□□□ -0.03
TSPAN4-204ENST00000397404 TEX38Q6PEX7 206 aa14.87□□□□□ -0.03
TSPAN4-204ENST00000397404 OR10G4Q8NGN3 311 aa14.87□□□□□ -0.03
TSPAN4-204ENST00000397404 OR10G9Q8NGN4 311 aa14.87□□□□□ -0.03
TSPAN4-204ENST00000397404 OR10G7Q8NGN6 311 aa14.87□□□□□ -0.03
TSPAN4-204ENST00000397404 SMR3AQ99954 134 aa14.87□□□□□ -0.03
TSPAN4-204ENST00000397404 ZFHX3Q15911 3703 aa14.87□□□□□ -0.03
TSPAN4-204ENST00000397404 CTXND1A0A1B0GTU2 59 aa14.86□□□□□ -0.03
TSPAN4-204ENST00000397404 TRGV3P03979 118 aa14.86□□□□□ -0.03
TSPAN4-204ENST00000397404 H2AFB1P0C5Y9 115 aa14.86□□□□□ -0.03
TSPAN4-204ENST00000397404 RHOBP62745 196 aa14.86□□□□□ -0.03
TSPAN4-204ENST00000397404 FOXE3Q13461 319 aa14.86□□□□□ -0.03
TSPAN4-204ENST00000397404 IL34Q6ZMJ4 242 aa14.86□□□□□ -0.03
TSPAN4-204ENST00000397404 FAM213BQ8TBF2 198 aa14.86□□□□□ -0.03
TSPAN4-204ENST00000397404 ZNF502Q8TBZ5 544 aa14.86□□□□□ -0.03
TSPAN4-204ENST00000397404 MBD3L1Q8WWY6 194 aa14.86□□□□□ -0.03
TSPAN4-204ENST00000397404 RPRMQ9NS64 109 aa14.86□□□□□ -0.03
TSPAN4-204ENST00000397404 IGKV1D-37A0A075B6S9 117 aa14.85□□□□□ -0.03
TSPAN4-204ENST00000397404 NUPL2O15504 423 aaKnown RBP14.85□□□□□ -0.03
TSPAN4-204ENST00000397404 NDUFB8O95169 186 aa14.85□□□□□ -0.03
TSPAN4-204ENST00000397404 ZNF616Q08AN1 781 aa14.85□□□□□ -0.03
TSPAN4-204ENST00000397404 Q56UQ5 140 aa14.85□□□□□ -0.03
TSPAN4-204ENST00000397404 MIC13Q5XKP0 118 aa14.85□□□□□ -0.03
TSPAN4-204ENST00000397404 C19orf35Q6ZS72 473 aa14.85□□□□□ -0.03
TSPAN4-204ENST00000397404 MRPL32Q9BYC8 188 aaKnown RBP14.85□□□□□ -0.03
TSPAN4-204ENST00000397404 ANK3Q12955 4377 aaKnown RBP14.85□□□□□ -0.03
TSPAN4-204ENST00000397404 A0A1W2PPV4 95 aa14.84□□□□□ -0.03
TSPAN4-204ENST00000397404 TOMM40O96008 361 aa14.84□□□□□ -0.03
TSPAN4-204ENST00000397404 PSMB8P28062 276 aa14.84□□□□□ -0.03
TSPAN4-204ENST00000397404 ELLP55199 621 aaPredicted RBP14.84□□□□□ -0.03
TSPAN4-204ENST00000397404 RNF152Q8N8N0 203 aa14.84□□□□□ -0.03
TSPAN4-204ENST00000397404 HIVEP1P15822 2718 aa14.84□□□□□ -0.03
TSPAN4-204ENST00000397404 MTORP42345 2549 aa14.84□□□□□ -0.03
TSPAN4-204ENST00000397404 RAB19A4D1S5 217 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 PSMB11A5LHX3 300 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 FAM181BA6NEQ2 426 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 CRLF1O75462 422 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 LINC00869P0C866 280 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 RD3LP0DJH9 198 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 TAGLN2P37802 199 aaKnown RBP14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 CDC34P49427 236 aaPredicted RBP14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 PPT1P50897 306 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 RAB9AP51151 201 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 TPPP2P59282 170 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 PMS2P11Q13670 270 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 RPP25LQ8N5L8 163 aaKnown RBP14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 OR51G1Q8NGK1 321 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 Q8WTZ3 238 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 WFDC12Q8WWY7 111 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 NOL4LQ96MY1 436 aaPredicted RBP14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 C16orf95Q9H693 158 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 PLA2G2EQ9NZK7 142 aa14.83□□□□□ -0.03
TSPAN4-204ENST00000397404 MFSD2BA6NFX1 497 aa14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 TCF21O43680 179 aa14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 OR2C1O95371 312 aa14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 TAS2R45P59539 299 aa14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 RELQ04864 619 aaPredicted RBP14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 RCC1LQ96I51 464 aaKnown RBP14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 SMDT1Q9H4I9 107 aa14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 DNAJC4Q9NNZ3 241 aa14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 MRPL36Q9P0J6 103 aaKnown RBP14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 NSD1Q96L73 2696 aaPredicted RBP14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 YIF1AO95070 293 aa14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 NDUFA7O95182 113 aa14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 IGKV1-17P01599 117 aa14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 PF4V1P10720 104 aa14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 Q6ZS46 218 aa14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 EIF4E3Q8N5X7 224 aaKnown RBP14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 ESM1Q9NQ30 184 aa14.82□□□□□ -0.04
TSPAN4-204ENST00000397404 INAFM1C9JVW0 142 aa14.81□□□□□ -0.04
TSPAN4-204ENST00000397404 OR5G3P0C626 314 aa14.81□□□□□ -0.04
TSPAN4-204ENST00000397404 UQCC3Q6UW78 93 aa14.81□□□□□ -0.04
TSPAN4-204ENST00000397404 ZNF600Q6ZNG1 722 aa14.81□□□□□ -0.04
TSPAN4-204ENST00000397404 STXBP6Q8NFX7 210 aa14.81□□□□□ -0.04
TSPAN4-204ENST00000397404 MARC2Q969Z3 335 aa14.81□□□□□ -0.04
TSPAN4-204ENST00000397404 PBDC1Q9BVG4 233 aa14.81□□□□□ -0.04
TSPAN4-204ENST00000397404 LINC00527Q9UJ94 153 aa14.81□□□□□ -0.04
TSPAN4-204ENST00000397404 IGHV3-21A0A0B4J1V1 117 aa14.8□□□□□ -0.04
TSPAN4-204ENST00000397404 COX7A2P2O60397 106 aa14.8□□□□□ -0.04
TSPAN4-204ENST00000397404 HYPMO75409 117 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms