RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 GLRXP35754 106 aa11.96□□□□□ -0.49
CCNF-202ENST00000397066 TMEM177Q53S58 311 aa11.96□□□□□ -0.49
CCNF-202ENST00000397066 RNF24Q9Y225 148 aa11.96□□□□□ -0.49
CCNF-202ENST00000397066 MRPS16Q9Y3D3 137 aaKnown RBP11.96□□□□□ -0.49
CCNF-202ENST00000397066 TMEM265A0A087WTH1 108 aa11.96□□□□□ -0.49
CCNF-202ENST00000397066 A8MWL6 223 aa11.96□□□□□ -0.49
CCNF-202ENST00000397066 NDUFB8O95169 186 aa11.96□□□□□ -0.49
CCNF-202ENST00000397066 OSR1Q8TAX0 266 aaPredicted RBP11.96□□□□□ -0.49
CCNF-202ENST00000397066 PERPQ96FX8 193 aa11.96□□□□□ -0.49
CCNF-202ENST00000397066 RPUSD1Q9UJJ7 312 aaKnown RBP11.96□□□□□ -0.49
CCNF-202ENST00000397066 SLC25A15Q9Y619 301 aa11.96□□□□□ -0.49
CCNF-202ENST00000397066 RASL11AQ6T310 242 aa11.96□□□□□ -0.5
CCNF-202ENST00000397066 ALKBH7Q9BT30 221 aaPredicted RBP11.96□□□□□ -0.5
CCNF-202ENST00000397066 COX11Q9Y6N1 276 aa11.96□□□□□ -0.5
CCNF-202ENST00000397066 SSX8Q7RTT4 187 aa11.95□□□□□ -0.5
CCNF-202ENST00000397066 VSTM2AQ8TAG5 236 aa11.95□□□□□ -0.5
CCNF-202ENST00000397066 IGHG3P01860 377 aa11.95□□□□□ -0.5
CCNF-202ENST00000397066 CD59P13987 128 aa11.95□□□□□ -0.5
CCNF-202ENST00000397066 CCL3L1P16619 93 aa11.95□□□□□ -0.5
CCNF-202ENST00000397066 UBE2V1Q13404 147 aa11.95□□□□□ -0.5
CCNF-202ENST00000397066 CR1LQ2VPA4 569 aa11.95□□□□□ -0.5
CCNF-202ENST00000397066 SLC25A17O43808 307 aa11.95□□□□□ -0.5
CCNF-202ENST00000397066 POU2AF1Q16633 256 aa11.95□□□□□ -0.5
CCNF-202ENST00000397066 DEFB109BQ30KR1 87 aa11.95□□□□□ -0.5
CCNF-202ENST00000397066 TMEM191AQ9H0A3 160 aa11.95□□□□□ -0.5
CCNF-202ENST00000397066 EPDR1Q9UM22 224 aa11.95□□□□□ -0.5
CCNF-202ENST00000397066 SRSF6Q13247 344 aaKnown RBP11.94□□□□□ -0.5
CCNF-202ENST00000397066 SLC25A48Q6ZT89 311 aaKnown RBP11.94□□□□□ -0.5
CCNF-202ENST00000397066 FAM167A-AS1Q96KT0 104 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 GAFA1Q96PS6 74 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 ARFGEF3Q5TH69 2177 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 TCRBV4S1A1TA0A5B7 111 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 COL8A1P27658 744 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 FBLN7Q53RD9 439 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 STXBP6Q8NFX7 210 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 ABCA1O95477 2261 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 IGHV3-72A0A0B4J1Y9 119 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 NUDT3O95989 172 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 CFHR2P36980 270 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 CA7P43166 264 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 VMA21Q3ZAQ7 101 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 ZNF714Q96N38 554 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 RPP21Q9H633 154 aaKnown RBP11.94□□□□□ -0.5
CCNF-202ENST00000397066 NBEAP1P0C6P0 100 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 HTR1DP28221 377 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 GDF5OSQ5U4N7 250 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 ETFRF1Q6IPR1 90 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 PNKDQ8N490 385 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 OR8B3Q8NGG8 313 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 GPR82Q96P67 336 aa11.94□□□□□ -0.5
CCNF-202ENST00000397066 IGHV2-26A0A0B4J1V2 119 aa11.93□□□□□ -0.5
CCNF-202ENST00000397066 hDV102S1A0JD36 115 aa11.93□□□□□ -0.5
CCNF-202ENST00000397066 OR4C13Q8NGP0 309 aa11.93□□□□□ -0.5
CCNF-202ENST00000397066 MAP1LC3CQ9BXW4 147 aa11.93□□□□□ -0.5
CCNF-202ENST00000397066 MPV17L2Q567V2 206 aa11.93□□□□□ -0.5
CCNF-202ENST00000397066 SLC25A34Q6PIV7 304 aa11.93□□□□□ -0.5
CCNF-202ENST00000397066 VPS25Q9BRG1 176 aa11.93□□□□□ -0.5
CCNF-202ENST00000397066 PLCE1Q9P212 2302 aa11.93□□□□□ -0.5
CCNF-202ENST00000397066 CGB3P0DN86 165 aa11.93□□□□□ -0.5
CCNF-202ENST00000397066 CGB7P0DN87 165 aa11.93□□□□□ -0.5
CCNF-202ENST00000397066 FAM231DQ6ZW35 169 aa11.93□□□□□ -0.5
CCNF-202ENST00000397066 KIR3DL3Q8N743 410 aa11.93□□□□□ -0.5
CCNF-202ENST00000397066 GSX1Q9H4S2 264 aaPredicted RBP11.93□□□□□ -0.5
CCNF-202ENST00000397066 NDUFA4L2Q9NRX3 87 aa11.93□□□□□ -0.5
CCNF-202ENST00000397066 TM4SF5O14894 197 aa11.92□□□□□ -0.5
CCNF-202ENST00000397066 RNASE8Q8TDE3 154 aaKnown RBP11.92□□□□□ -0.5
CCNF-202ENST00000397066 WIPF2Q8TF74 440 aaPredicted RBP11.92□□□□□ -0.5
CCNF-202ENST00000397066 MCRIP2Q9BUT9 160 aaKnown RBP11.92□□□□□ -0.5
CCNF-202ENST00000397066 IGHV1-69-2A0A0G2JMI3 117 aa11.92□□□□□ -0.5
CCNF-202ENST00000397066 IGHV1-46P01743 117 aa11.92□□□□□ -0.5
CCNF-202ENST00000397066 PMCHL2Q9BQD1 86 aa11.92□□□□□ -0.5
CCNF-202ENST00000397066 ZCCHC24Q8N2G6 241 aaKnown RBP11.92□□□□□ -0.5
CCNF-202ENST00000397066 CCL17Q92583 94 aa11.92□□□□□ -0.5
CCNF-202ENST00000397066 FNDC4Q9H6D8 234 aaPredicted RBP11.92□□□□□ -0.5
CCNF-202ENST00000397066 LHBP01229 141 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 LYZP61626 148 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 TIMM23BQ5SRD1 257 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 COLQQ9Y215 455 aaPredicted RBP11.91□□□□□ -0.5
CCNF-202ENST00000397066 TNFRSF1AP19438 455 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 ZNF138P52744 262 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 WT1-ASQ06250 92 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 ATP5L2Q7Z4Y8 100 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 PRNTQ86SH4 94 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 PCNX2A6NKB5 2137 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 E7EUB6 86 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 H0YJW9 148 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 TP73-AS1Q9UF72 201 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 LINC00312Q9Y6C7 94 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 PRB4P10163 310 aaPredicted RBP11.91□□□□□ -0.5
CCNF-202ENST00000397066 PATE2Q6UY27 113 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 FXYD5Q96DB9 178 aa11.91□□□□□ -0.5
CCNF-202ENST00000397066 LOXL4Q96JB6 756 aa11.9□□□□□ -0.5
CCNF-202ENST00000397066 ZNF788Q6ZQV5 615 aa11.9□□□□□ -0.5
CCNF-202ENST00000397066 WFDC8Q8IUA0 241 aa11.9□□□□□ -0.5
CCNF-202ENST00000397066 AP1S3Q96PC3 154 aa11.9□□□□□ -0.5
CCNF-202ENST00000397066 WDFY4Q6ZS81 3184 aa11.9□□□□□ -0.5
CCNF-202ENST00000397066 DSPP15924 2871 aaKnown RBP11.9□□□□□ -0.5
CCNF-202ENST00000397066 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.9□□□□□ -0.5
CCNF-202ENST00000397066 FAM87AP0C7U9 286 aa11.9□□□□□ -0.5
CCNF-202ENST00000397066 KLF5Q13887 457 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms