RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 LINC00158P58513 81 aa11.71□□□□□ -0.54
COL4A3-202ENST00000396578 C1orf162Q8NEQ5 155 aaPredicted RBP11.71□□□□□ -0.54
COL4A3-202ENST00000396578 PRR19A6NJB7 356 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 RAMP3O60896 148 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 OR13A1Q8NGR1 328 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 TMEM242Q9NWH2 141 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 TNFRSF6BO95407 300 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 SRSF3P84103 164 aaKnown RBP11.7□□□□□ -0.54
COL4A3-202ENST00000396578 NRN1LQ496H8 165 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 NR2C2APQ86WQ0 139 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 LURAP1LQ8IV03 231 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 C4orf51C9J302 202 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 TSKUQ8WUA8 353 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 RNF125Q96EQ8 232 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 SSBP2P81877 361 aaPredicted RBP11.7□□□□□ -0.54
COL4A3-202ENST00000396578 SCN10AQ9Y5Y9 1956 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 GLI3P10071 1580 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 SAA2-SAA4A0A096LPE2 208 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 NBR2O15453 112 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 SAA2P0DJI9 122 aaPredicted RBP11.7□□□□□ -0.54
COL4A3-202ENST00000396578 ESDP10768 282 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 BSPH1Q075Z2 132 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 EIF4EBP2Q13542 120 aaPredicted RBP11.7□□□□□ -0.54
COL4A3-202ENST00000396578 OVOL2Q9BRP0 275 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 A0A1W2PRE2 83 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 PLPPR1Q8TBJ4 325 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 FOXL1Q12952 345 aa11.7□□□□□ -0.54
COL4A3-202ENST00000396578 F8VVB4 439 aa11.69□□□□□ -0.54
COL4A3-202ENST00000396578 F8VWA3 439 aa11.69□□□□□ -0.54
COL4A3-202ENST00000396578 CD55P08174 381 aa11.69□□□□□ -0.54
COL4A3-202ENST00000396578 DLX4Q92988 240 aaPredicted RBP11.69□□□□□ -0.54
COL4A3-202ENST00000396578 ZNF48Q96MX3 618 aaPredicted RBP11.69□□□□□ -0.54
COL4A3-202ENST00000396578 JPT2Q9H910 190 aa11.69□□□□□ -0.54
COL4A3-202ENST00000396578 YPEL1O60688 119 aa11.69□□□□□ -0.54
COL4A3-202ENST00000396578 DUSP14O95147 198 aaKnown RBP11.69□□□□□ -0.54
COL4A3-202ENST00000396578 CECR9P0C854 216 aa11.69□□□□□ -0.54
COL4A3-202ENST00000396578 YPEL2Q96QA6 119 aa11.69□□□□□ -0.54
COL4A3-202ENST00000396578 TRGV11A0A075B6L2 103 aa11.69□□□□□ -0.54
COL4A3-202ENST00000396578 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
COL4A3-202ENST00000396578 EFNB3Q15768 340 aa11.69□□□□□ -0.54
COL4A3-202ENST00000396578 OCC1Q8TAD7 63 aa11.69□□□□□ -0.54
COL4A3-202ENST00000396578 TSC2P49815 1807 aa11.69□□□□□ -0.54
COL4A3-202ENST00000396578 UMODP07911 640 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 OCIAD2Q56VL3 154 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 FAM168AQ92567 244 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 PSG8Q9UQ74 426 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 UPK2O00526 184 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 C1QL4Q86Z23 238 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 LAIR2Q6ISS4 152 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 RASL11AQ6T310 242 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 ZNF497Q6ZNH5 498 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 LAMTOR3Q9UHA4 124 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 NCKAP5O14513 1909 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 PRTN3P24158 256 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 HIST3H2BBQ8N257 126 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 LINC01560Q8TB33 94 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 TMEM190Q8WZ59 177 aa11.68□□□□□ -0.54
COL4A3-202ENST00000396578 ITGB1BP1O14713 200 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 FAM90A9PA6NNJ1 464 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 NPC2P61916 151 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 SAP25Q8TEE9 199 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 REPIN1Q9BWE0 567 aaKnown RBP11.67□□□□□ -0.54
COL4A3-202ENST00000396578 IQCF6A8MYZ5 107 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 SMAD7O15105 426 aaKnown RBP11.67□□□□□ -0.54
COL4A3-202ENST00000396578 VDAC2P45880 294 aaPredicted RBP11.67□□□□□ -0.54
COL4A3-202ENST00000396578 CD300EQ496F6 205 aaPredicted RBP11.67□□□□□ -0.54
COL4A3-202ENST00000396578 TRBV6-7A0A0A0MS04 114 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 A0A1B0GTI1 187 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 TIMP3P35625 211 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 C8orf46Q8TAG6 207 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 PLXND1Q9Y4D7 1925 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 IGHV2OR16-5A0A0B4J2B6 119 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 C2orf82Q6UX34 121 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 ZGRF1Q86YA3 2104 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 FAM216BQ8N7L0 139 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 A0A0U1RRA0 63 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 TEX38Q6PEX7 206 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 DEPPQ9NTK1 212 aa11.67□□□□□ -0.54
COL4A3-202ENST00000396578 A0A1W2PRX2 142 aa11.66□□□□□ -0.54
COL4A3-202ENST00000396578 SHISA3A0PJX4 238 aa11.66□□□□□ -0.54
COL4A3-202ENST00000396578 PYYP10082 97 aa11.66□□□□□ -0.54
COL4A3-202ENST00000396578 IGFBP3P17936 291 aaPredicted RBP11.66□□□□□ -0.54
COL4A3-202ENST00000396578 ZNF407Q9C0G0 2248 aa11.66□□□□□ -0.54
COL4A3-202ENST00000396578 ZXDCQ2QGD7 858 aaPredicted RBP11.66□□□□□ -0.54
COL4A3-202ENST00000396578 GTSCR1Q86UQ5 136 aa11.66□□□□□ -0.54
COL4A3-202ENST00000396578 RSPO4Q2I0M5 234 aaPredicted RBP11.66□□□□□ -0.54
COL4A3-202ENST00000396578 CHCHD2Q9Y6H1 151 aaPredicted RBP11.66□□□□□ -0.54
COL4A3-202ENST00000396578 SIGLEC15Q6ZMC9 328 aa11.66□□□□□ -0.54
COL4A3-202ENST00000396578 MORN2Q502X0 79 aa11.66□□□□□ -0.54
COL4A3-202ENST00000396578 COLCA1Q6ZS62 124 aa11.66□□□□□ -0.54
COL4A3-202ENST00000396578 IGLV3-21P80748 117 aaPredicted RBP11.65□□□□□ -0.54
COL4A3-202ENST00000396578 BCL6BQ8N143 479 aaPredicted RBP11.65□□□□□ -0.54
COL4A3-202ENST00000396578 COX11Q9Y6N1 276 aa11.65□□□□□ -0.54
COL4A3-202ENST00000396578 NOTCH3Q9UM47 2321 aa11.65□□□□□ -0.54
COL4A3-202ENST00000396578 FAM90A2PQ658T7 463 aa11.65□□□□□ -0.54
COL4A3-202ENST00000396578 DTX1Q86Y01 620 aa11.65□□□□□ -0.54
COL4A3-202ENST00000396578 PPIFP30405 207 aaKnown RBP11.65□□□□□ -0.54
COL4A3-202ENST00000396578 SLC25A48Q6ZT89 311 aaKnown RBP11.65□□□□□ -0.54
COL4A3-202ENST00000396578 IGHV3-11P01762 117 aa11.65□□□□□ -0.54
COL4A3-202ENST00000396578 AMBPP02760 352 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms