RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 TCEANCQ8N8B7 351 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 WFDC5Q8TCV5 224 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 PHLDA1Q8WV24 401 aaPredicted RBP3.33□□□□□ -1.88
HERC4-204ENST00000395198 MUCL1Q96DR8 90 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 SMIM14Q96QK8 99 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 METTL26Q96S19 204 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 TMEM191AQ9H0A3 160 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 SRCAPQ6ZRS2 3230 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 A0A1B0GV50 99 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 TCRBV5S1A1TA0A578 114 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 HLA-DQB1P01920 261 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 GATA2P23769 480 aaPredicted RBP3.33□□□□□ -1.88
HERC4-204ENST00000395198 RPS23P62266 143 aaKnown RBP3.33□□□□□ -1.88
HERC4-204ENST00000395198 CENPWQ5EE01 88 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 MRPL54Q6P161 138 aaKnown RBP3.33□□□□□ -1.88
HERC4-204ENST00000395198 ACP7Q6ZNF0 438 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 MPC1Q9Y5U8 109 aa3.33□□□□□ -1.88
HERC4-204ENST00000395198 TRAV8-2A0A0B4J237 113 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 M0R2P5 195 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 C10orf111Q8N326 155 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 ZNRF1Q8ND25 227 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 TMEM106BQ9NUM4 274 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 ZNF222Q9UK12 451 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 CHCHD2Q9Y6H1 151 aaPredicted RBP3.32□□□□□ -1.88
HERC4-204ENST00000395198 DYSFO75923 2080 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 IGKV1D-43A0A0B4J1Z2 117 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 RBMY1BA6NDE4 496 aaKnown RBP3.32□□□□□ -1.88
HERC4-204ENST00000395198 RBMY1EA6NEQ0 496 aaKnown RBP3.32□□□□□ -1.88
HERC4-204ENST00000395198 KLLNB2CW77 178 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 XKRYO14609 159 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 CYB5AP00167 134 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 TCRAP04437 139 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 FCGR3AP08637 254 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 SFTA3P0C7M3 94 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 RBMY1DP0C7P1 496 aaKnown RBP3.32□□□□□ -1.88
HERC4-204ENST00000395198 RBMY1A1P0DJD3 496 aaKnown RBP3.32□□□□□ -1.88
HERC4-204ENST00000395198 IGHV4-31P0DP07 118 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 SMIM11AP58511 58 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 FAM222AQ5U5X8 452 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 ZNF114Q8NC26 417 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 OR4B1Q8NGF8 309 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 OR2A1Q8NGT9 310 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 C17orf77Q96MU5 243 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 SPTBN1Q01082 2364 aaKnown RBP3.32□□□□□ -1.88
HERC4-204ENST00000395198 CACNA1CQ13936 2221 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 TRAV27A0A087WT01 109 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 A6NDN8 102 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 LGALS9O00182 355 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 SOCS1O15524 211 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 POLR2JP52435 117 aaKnown RBP3.32□□□□□ -1.88
HERC4-204ENST00000395198 SLC18A1P54219 525 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 ELOBQ15370 118 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 BVES-AS1Q5T3Y7 98 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 SMRP1Q8NCR6 262 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 OR1L3Q8NH93 324 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 C11orf68Q9H3H3 251 aaKnown RBP3.32□□□□□ -1.88
HERC4-204ENST00000395198 AKAP6Q13023 2319 aa3.32□□□□□ -1.88
HERC4-204ENST00000395198 TRAV1-1A0A0B4J248 108 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 ETV2O00321 342 aaPredicted RBP3.31□□□□□ -1.88
HERC4-204ENST00000395198 MT-ND6P03923 174 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 EBI3Q14213 229 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 DEFB124Q8NES8 71 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 ZNF501Q96CX3 271 aaPredicted RBP3.31□□□□□ -1.88
HERC4-204ENST00000395198 LINC00526Q96FQ7 95 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 DOCK1Q14185 1865 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 ZNF705FA8MVS1 300 aaPredicted RBP3.31□□□□□ -1.88
HERC4-204ENST00000395198 LYZL6O75951 148 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 NCR2O95944 276 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 ZNF705DP0CH99 300 aaPredicted RBP3.31□□□□□ -1.88
HERC4-204ENST00000395198 ZNF705BP0CI00 300 aaPredicted RBP3.31□□□□□ -1.88
HERC4-204ENST00000395198 SLC25A1P53007 311 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 HES1Q14469 280 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 RTL8BQ17RB0 113 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 TTC32Q5I0X7 151 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 TMEM158Q8WZ71 300 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 MAL2Q969L2 176 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 RTL8AQ9BWD3 113 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 FGF22Q9HCT0 170 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 DOPEY2Q9Y3R5 2298 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 TCRBV3S1A0A5B6 114 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 SCRG1O75711 98 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 NAPSAO96009 420 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 IGHG1P01857 330 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 SLC25A4P12235 298 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 RPS27LQ71UM5 84 aaKnown RBP3.31□□□□□ -1.88
HERC4-204ENST00000395198 PRNTQ86SH4 94 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 RPP25LQ8N5L8 163 aaKnown RBP3.31□□□□□ -1.88
HERC4-204ENST00000395198 ZIC4Q8N9L1 334 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 OR4X2Q8NGF9 303 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 AK3Q9UIJ7 227 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 HHLA3Q9XRX5 114 aa3.31□□□□□ -1.88
HERC4-204ENST00000395198 EPOPA6NHQ4 379 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 WNT9BO14905 357 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 DUSP14O95147 198 aaKnown RBP3.3□□□□□ -1.88
HERC4-204ENST00000395198 SNCAP37840 140 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 Q6ZSV7 163 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 C6orf223Q8N319 242 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 TET1Q8NFU7 2136 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 MAST2Q6P0Q8 1798 aa3.3□□□□□ -1.88
HERC4-204ENST00000395198 C5orf67F2Z3F1 127 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms