RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 COMMD7Q86VX2 200 aa10.23□□□□□ -0.77
VPS26A-203ENST00000395098 TMEM86BQ8N661 226 aa10.23□□□□□ -0.77
VPS26A-203ENST00000395098 LYPD6BQ8NI32 183 aa10.23□□□□□ -0.77
VPS26A-203ENST00000395098 ATP6V1G1O75348 118 aa10.23□□□□□ -0.77
VPS26A-203ENST00000395098 CLN5O75503 358 aa10.23□□□□□ -0.77
VPS26A-203ENST00000395098 IGKV1-17P01599 117 aa10.23□□□□□ -0.77
VPS26A-203ENST00000395098 CCL20P78556 96 aa10.23□□□□□ -0.77
VPS26A-203ENST00000395098 SPSB3Q6PJ21 355 aa10.23□□□□□ -0.77
VPS26A-203ENST00000395098 C10orf99Q6UWK7 81 aa10.23□□□□□ -0.77
VPS26A-203ENST00000395098 NPFFR1Q9GZQ6 430 aa10.23□□□□□ -0.77
VPS26A-203ENST00000395098 SLC25A22Q9H936 323 aa10.23□□□□□ -0.77
VPS26A-203ENST00000395098 THYN1Q9P016 225 aa10.23□□□□□ -0.77
VPS26A-203ENST00000395098 INAFM1C9JVW0 142 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 HMGB3O15347 200 aaKnown RBP10.22□□□□□ -0.77
VPS26A-203ENST00000395098 CYB5BO43169 146 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 HIST1H1BP16401 226 aaKnown RBP10.22□□□□□ -0.77
VPS26A-203ENST00000395098 TIGITQ495A1 244 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 FAM122CQ6P4D5 195 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 DPPA3Q6W0C5 159 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 LCNL1Q6ZST4 164 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 ZNF329Q86UD4 541 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 TRGV9Q99603 122 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 PRSS22Q9GZN4 317 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 KLK15Q9H2R5 256 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 C21orf62Q9NYP8 219 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 H2AFB1P0C5Y9 115 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 FOSL1P15407 271 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 ACOT6Q3I5F7 207 aaPredicted RBP10.22□□□□□ -0.77
VPS26A-203ENST00000395098 LCN15Q6UWW0 184 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 NECAP1Q8NC96 275 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 SFT2D1Q8WV19 159 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 CDC42EP3Q9UKI2 254 aa10.22□□□□□ -0.77
VPS26A-203ENST00000395098 FAM181BA6NEQ2 426 aa10.21□□□□□ -0.77
VPS26A-203ENST00000395098 MBP02144 154 aa10.21□□□□□ -0.77
VPS26A-203ENST00000395098 SEPSECSQ9HD40 501 aaKnown RBP10.21□□□□□ -0.77
VPS26A-203ENST00000395098 MED9Q9NWA0 146 aa10.21□□□□□ -0.77
VPS26A-203ENST00000395098 IGLV1-40P01703 118 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 FGF8P55075 233 aaPredicted RBP10.21□□□□□ -0.78
VPS26A-203ENST00000395098 MFAP4P55083 255 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 Q56UQ5 140 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 SPATA31B1PQ5VZV4 182 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 ZNF502Q8TBZ5 544 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 TMEM37Q8WXS4 190 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 RAB24Q969Q5 203 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 CCDC140Q96MF4 163 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 CITED4Q96RK1 184 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 KCNIP2Q9NS61 270 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 ZNF580Q9UK33 172 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 PSMB11A5LHX3 300 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 OR2T8A6NH00 312 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 TRGV3P03979 118 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 VN1R17PQ8TDU5 208 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 DOK5Q9P104 306 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 PFDN2Q9UHV9 154 aa10.21□□□□□ -0.78
VPS26A-203ENST00000395098 GNG7O60262 68 aa10.2□□□□□ -0.78
VPS26A-203ENST00000395098 NPBWR1P48145 328 aa10.2□□□□□ -0.78
VPS26A-203ENST00000395098 SRSF3P84103 164 aaKnown RBP10.2□□□□□ -0.78
VPS26A-203ENST00000395098 PATE2Q6UY27 113 aa10.2□□□□□ -0.78
VPS26A-203ENST00000395098 Q8N2B8 174 aa10.2□□□□□ -0.78
VPS26A-203ENST00000395098 MBD3L1Q8WWY6 194 aa10.2□□□□□ -0.78
VPS26A-203ENST00000395098 SEC14L6B5MCN3 397 aa10.2□□□□□ -0.78
VPS26A-203ENST00000395098 TSPAN9O75954 239 aa10.2□□□□□ -0.78
VPS26A-203ENST00000395098 PSG1P11464 419 aa10.2□□□□□ -0.78
VPS26A-203ENST00000395098 CDC34P49427 236 aaPredicted RBP10.2□□□□□ -0.78
VPS26A-203ENST00000395098 TPPP2P59282 170 aa10.2□□□□□ -0.78
VPS26A-203ENST00000395098 ZNF414Q96IQ9 312 aa10.2□□□□□ -0.78
VPS26A-203ENST00000395098 CHRDL1Q9BU40 450 aa10.2□□□□□ -0.78
VPS26A-203ENST00000395098 ACTR3CQ9C0K3 210 aaPredicted RBP10.2□□□□□ -0.78
VPS26A-203ENST00000395098 CTXND1A0A1B0GTU2 59 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 MAP1LC3B2A6NCE7 125 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 CTSGP08311 255 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 PF4V1P10720 104 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 ADMP35318 185 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 SELENOTP62341 195 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 MORN5Q5VZ52 161 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 MARC2Q969Z3 335 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 MAP1LC3BQ9GZQ8 125 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 SERTAD4Q9NUC0 356 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 CLDN34H7C241 214 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 BRI3O95415 125 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 CLEC3BP05452 202 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 FCGR2BP31994 310 aaPredicted RBP10.19□□□□□ -0.78
VPS26A-203ENST00000395098 GPR183P32249 361 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 ATP5G2Q06055 141 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 Q6ZSV7 163 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 TMPRSS5Q9H3S3 457 aa10.19□□□□□ -0.78
VPS26A-203ENST00000395098 TRAV1-1A0A0B4J248 108 aa10.18□□□□□ -0.78
VPS26A-203ENST00000395098 FAM223BA6NKX1 122 aa10.18□□□□□ -0.78
VPS26A-203ENST00000395098 H3BUA1 57 aa10.18□□□□□ -0.78
VPS26A-203ENST00000395098 IGHG4P01861 327 aa10.18□□□□□ -0.78
VPS26A-203ENST00000395098 RAB9AP51151 201 aa10.18□□□□□ -0.78
VPS26A-203ENST00000395098 SCGB2A2Q13296 93 aa10.18□□□□□ -0.78
VPS26A-203ENST00000395098 FAM78BQ5VT40 261 aa10.18□□□□□ -0.78
VPS26A-203ENST00000395098 CLEC19AQ6UXS0 136 aa10.18□□□□□ -0.78
VPS26A-203ENST00000395098 MIR17HGQ75NE6 70 aa10.18□□□□□ -0.78
VPS26A-203ENST00000395098 FAM223AQ8IWN6 122 aa10.18□□□□□ -0.78
VPS26A-203ENST00000395098 UHRF2Q96PU4 802 aa10.18□□□□□ -0.78
VPS26A-203ENST00000395098 FN1P02751 2386 aaKnown RBP10.18□□□□□ -0.78
VPS26A-203ENST00000395098 A0A1W2PPV4 95 aa10.18□□□□□ -0.78
VPS26A-203ENST00000395098 RD3LP0DJH9 198 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms