RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 A0A0G2JRQ6 117 aa14.34□□□□□ -0.11
UPK3B-203ENST00000394849 NUPL2O15504 423 aaKnown RBP14.34□□□□□ -0.11
UPK3B-203ENST00000394849 ST8SIA3O43173 380 aa14.34□□□□□ -0.11
UPK3B-203ENST00000394849 MIFP14174 115 aa14.34□□□□□ -0.11
UPK3B-203ENST00000394849 ERHP84090 104 aaKnown RBP14.34□□□□□ -0.11
UPK3B-203ENST00000394849 SPINK9Q5DT21 86 aa14.34□□□□□ -0.11
UPK3B-203ENST00000394849 PRR13Q9NZ81 148 aa14.34□□□□□ -0.11
UPK3B-203ENST00000394849 TRAV14DV4A0A0A6YYC5 116 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 F8W735 103 aaPredicted RBP14.33□□□□□ -0.12
UPK3B-203ENST00000394849 CTSGP08311 255 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 P0DMU3 169 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 FAM231AP0DMU4 169 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 FAM231CP0DMU5 169 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 VAMP1P23763 118 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 HLA-DMBP28068 263 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 CCR6P51684 374 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 SRPXP78539 464 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 TMEM128Q5BJH2 165 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 FAM90A2PQ658T7 463 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 LGI3Q8N145 548 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 POM121L12Q8N7R1 296 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 IL22RA2Q969J5 263 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 C7orf50Q9BRJ6 194 aaKnown RBP14.33□□□□□ -0.12
UPK3B-203ENST00000394849 ENY2Q9NPA8 101 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 TMEM56-RWDD3S4R434 201 aa14.33□□□□□ -0.12
UPK3B-203ENST00000394849 DNAH2Q9P225 4427 aa14.32□□□□□ -0.12
UPK3B-203ENST00000394849 TRAV2A0A0B4J234 112 aa14.32□□□□□ -0.12
UPK3B-203ENST00000394849 K7EIM0 57 aa14.32□□□□□ -0.12
UPK3B-203ENST00000394849 YIF1AO95070 293 aa14.32□□□□□ -0.12
UPK3B-203ENST00000394849 HOXA1P49639 335 aaPredicted RBP14.32□□□□□ -0.12
UPK3B-203ENST00000394849 SUPT4H1P63272 117 aaKnown RBP14.32□□□□□ -0.12
UPK3B-203ENST00000394849 LINC00299Q6ZSB3 139 aa14.32□□□□□ -0.12
UPK3B-203ENST00000394849 TXN2Q99757 166 aa14.32□□□□□ -0.12
UPK3B-203ENST00000394849 BATF3Q9NR55 127 aa14.32□□□□□ -0.12
UPK3B-203ENST00000394849 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.32□□□□□ -0.12
UPK3B-203ENST00000394849 CACNG5Q9UF02 275 aa14.32□□□□□ -0.12
UPK3B-203ENST00000394849 PIGBOS1A0A0B4J2F0 54 aa14.31□□□□□ -0.12
UPK3B-203ENST00000394849 STHQ8IWL8 128 aa14.31□□□□□ -0.12
UPK3B-203ENST00000394849 OR1P1Q8NH06 330 aa14.31□□□□□ -0.12
UPK3B-203ENST00000394849 S100ZQ8WXG8 99 aa14.31□□□□□ -0.12
UPK3B-203ENST00000394849 GPR146Q96CH1 333 aa14.31□□□□□ -0.12
UPK3B-203ENST00000394849 GINS3Q9BRX5 216 aa14.31□□□□□ -0.12
UPK3B-203ENST00000394849 PTTG2Q9NZH5 202 aa14.31□□□□□ -0.12
UPK3B-203ENST00000394849 IGKV3-7A0A075B6H7 116 aa14.3□□□□□ -0.12
UPK3B-203ENST00000394849 A0A0B4J2A0 478 aa14.3□□□□□ -0.12
UPK3B-203ENST00000394849 IGHV4-28A0A0C4DH34 117 aa14.3□□□□□ -0.12
UPK3B-203ENST00000394849 DNASE2O00115 360 aaPredicted RBP14.3□□□□□ -0.12
UPK3B-203ENST00000394849 AMBPP02760 352 aa14.3□□□□□ -0.12
UPK3B-203ENST00000394849 SNCAP37840 140 aa14.3□□□□□ -0.12
UPK3B-203ENST00000394849 MORN3Q6PF18 240 aaPredicted RBP14.3□□□□□ -0.12
UPK3B-203ENST00000394849 Q6ZRM9 215 aa14.3□□□□□ -0.12
UPK3B-203ENST00000394849 Q6ZTC4 211 aa14.3□□□□□ -0.12
UPK3B-203ENST00000394849 TCF24Q7RTU0 167 aa14.3□□□□□ -0.12
UPK3B-203ENST00000394849 GBGT1Q8N5D6 347 aa14.3□□□□□ -0.12
UPK3B-203ENST00000394849 MISP3Q96FF7 219 aa14.3□□□□□ -0.12
UPK3B-203ENST00000394849 CCDC32Q9BV29 185 aa14.3□□□□□ -0.12
UPK3B-203ENST00000394849 SHPKQ9UHJ6 478 aa14.3□□□□□ -0.12
UPK3B-203ENST00000394849 DNAH17Q9UFH2 4485 aa14.3□□□□□ -0.12
UPK3B-203ENST00000394849 IGHV3-21A0A0B4J1V1 117 aa14.29□□□□□ -0.12
UPK3B-203ENST00000394849 RTL8CO15255 209 aa14.29□□□□□ -0.12
UPK3B-203ENST00000394849 NDUFB6O95139 128 aa14.29□□□□□ -0.12
UPK3B-203ENST00000394849 RBMY1A1P0DJD3 496 aaKnown RBP14.29□□□□□ -0.12
UPK3B-203ENST00000394849 RBMY1CP0DJD4 496 aa14.29□□□□□ -0.12
UPK3B-203ENST00000394849 SULT1A3P0DMM9 295 aa14.29□□□□□ -0.12
UPK3B-203ENST00000394849 SULT1A4P0DMN0 295 aa14.29□□□□□ -0.12
UPK3B-203ENST00000394849 SPP1P10451 314 aa14.29□□□□□ -0.12
UPK3B-203ENST00000394849 MFAP4P55083 255 aa14.29□□□□□ -0.12
UPK3B-203ENST00000394849 SPCS3P61009 180 aa14.29□□□□□ -0.12
UPK3B-203ENST00000394849 RBMY1FQ15415 496 aaKnown RBP14.29□□□□□ -0.12
UPK3B-203ENST00000394849 LGALS9BQ3B8N2 356 aa14.29□□□□□ -0.12
UPK3B-203ENST00000394849 ZNF114Q8NC26 417 aa14.29□□□□□ -0.12
UPK3B-203ENST00000394849 DUSP18Q8NEJ0 188 aa14.29□□□□□ -0.12
UPK3B-203ENST00000394849 IGHV3-49A0A0A0MS15 119 aa14.28□□□□□ -0.12
UPK3B-203ENST00000394849 ZNF705EA8MWA4 302 aaPredicted RBP14.28□□□□□ -0.12
UPK3B-203ENST00000394849 SUB1P53999 127 aaKnown RBP eCLIP14.28□□□□□ -0.12
UPK3B-203ENST00000394849 DEFB131AP59861 70 aa14.28□□□□□ -0.12
UPK3B-203ENST00000394849 PPP1R1AQ13522 171 aa14.28□□□□□ -0.12
UPK3B-203ENST00000394849 LYZL2Q7Z4W2 148 aa14.28□□□□□ -0.12
UPK3B-203ENST00000394849 OR52E5Q8NH55 327 aa14.28□□□□□ -0.12
UPK3B-203ENST00000394849 MS4A6AQ9H2W1 248 aa14.28□□□□□ -0.12
UPK3B-203ENST00000394849 CEBPZOSA8MTT3 80 aa14.27□□□□□ -0.13
UPK3B-203ENST00000394849 INS-IGF2F8WCM5 200 aa14.27□□□□□ -0.13
UPK3B-203ENST00000394849 NXPH3O95157 252 aa14.27□□□□□ -0.13
UPK3B-203ENST00000394849 SFT2D2O95562 160 aa14.27□□□□□ -0.13
UPK3B-203ENST00000394849 UBE2MP61081 183 aaKnown RBP14.27□□□□□ -0.13
UPK3B-203ENST00000394849 PINX1Q96BK5 328 aaKnown RBP14.27□□□□□ -0.13
UPK3B-203ENST00000394849 NDUFAF3Q9BU61 184 aa14.27□□□□□ -0.13
UPK3B-203ENST00000394849 VSIRQ9H7M9 311 aa14.27□□□□□ -0.13
UPK3B-203ENST00000394849 CACFD1Q9UGQ2 172 aa14.27□□□□□ -0.13
UPK3B-203ENST00000394849 ABCA13Q86UQ4 5058 aa14.27□□□□□ -0.13
UPK3B-203ENST00000394849 DUXBA0A1W2PPF3 345 aa14.26□□□□□ -0.13
UPK3B-203ENST00000394849 LYRM1O43325 122 aa14.26□□□□□ -0.13
UPK3B-203ENST00000394849 SMCO1Q147U7 214 aa14.26□□□□□ -0.13
UPK3B-203ENST00000394849 AARDQ4LEZ3 155 aa14.26□□□□□ -0.13
UPK3B-203ENST00000394849 NMSQ5H8A3 153 aa14.26□□□□□ -0.13
UPK3B-203ENST00000394849 LEMD1Q68G75 181 aa14.26□□□□□ -0.13
UPK3B-203ENST00000394849 ZNF414Q96IQ9 312 aa14.26□□□□□ -0.13
UPK3B-203ENST00000394849 WDR12Q9GZL7 423 aaKnown RBP14.26□□□□□ -0.13
UPK3B-203ENST00000394849 TMEM231Q9H6L2 316 aa14.26□□□□□ -0.13
UPK3B-203ENST00000394849 FLVCR2Q9UPI3 526 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms