RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 WDR83OSQ9Y284 106 aa8.14□□□□□ -1.11
PSEN1-204ENST00000394164 PTPRQQ9UMZ3 2332 aa8.14□□□□□ -1.11
PSEN1-204ENST00000394164 AHRRA9YTQ3 701 aa8.14□□□□□ -1.11
PSEN1-204ENST00000394164 FAM90A26D6RGX4 464 aa8.14□□□□□ -1.11
PSEN1-204ENST00000394164 MT-ND6P03923 174 aa8.14□□□□□ -1.11
PSEN1-204ENST00000394164 LINC00869P0C866 280 aa8.14□□□□□ -1.11
PSEN1-204ENST00000394164 PRAMEF5Q5TYX0 476 aa8.14□□□□□ -1.11
PSEN1-204ENST00000394164 SLC25A34Q6PIV7 304 aa8.14□□□□□ -1.11
PSEN1-204ENST00000394164 MIR17HGQ75NE6 70 aa8.14□□□□□ -1.11
PSEN1-204ENST00000394164 SPACA3Q8IXA5 215 aa8.14□□□□□ -1.11
PSEN1-204ENST00000394164 DEFB125Q8N687 156 aa8.14□□□□□ -1.11
PSEN1-204ENST00000394164 FAM216AQ8WUB2 273 aa8.14□□□□□ -1.11
PSEN1-204ENST00000394164 TNFRSF19Q9NS68 423 aa8.14□□□□□ -1.11
PSEN1-204ENST00000394164 ASH1LQ9NR48 2969 aaKnown RBP8.14□□□□□ -1.11
PSEN1-204ENST00000394164 COL12A1Q99715 3063 aa8.14□□□□□ -1.11
PSEN1-204ENST00000394164 FAM231BA6NCW3 169 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 C2orf70A6NJV1 201 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 HLA-DQA1P01909 254 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 RHOBP62745 196 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 TIGITQ495A1 244 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 GDF5OSQ5U4N7 250 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 FAM216BQ8N7L0 139 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 RAB37Q96AX2 223 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 SGK494Q96LW2 274 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 CCL13Q99616 98 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 GGTLC1Q9BX51 225 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 ZNF355PQ9NSJ1 428 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 MRPL27Q9P0M9 148 aaKnown RBP8.13□□□□□ -1.11
PSEN1-204ENST00000394164 TRAV9-1A0A075B6T8 112 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 C7orf71A4D174 169 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 ZNF138P52744 262 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 TRAT1Q6PIZ9 186 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 TMEM70Q9BUB7 260 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 HILPDAQ9Y5L2 63 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 PRB3Q04118 309 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-204ENST00000394164 EFNB3Q15768 340 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 IGFL2Q6UWQ7 119 aa8.13□□□□□ -1.11
PSEN1-204ENST00000394164 TET2Q6N021 2002 aaPredicted RBP8.12□□□□□ -1.11
PSEN1-204ENST00000394164 C15orf65H3BRN8 121 aa8.12□□□□□ -1.11
PSEN1-204ENST00000394164 ZNF207O43670 478 aaKnown RBP8.12□□□□□ -1.11
PSEN1-204ENST00000394164 IGLV1-44P01699 117 aa8.12□□□□□ -1.11
PSEN1-204ENST00000394164 NBEAP1P0C6P0 100 aa8.12□□□□□ -1.11
PSEN1-204ENST00000394164 TBR1Q16650 682 aa8.12□□□□□ -1.11
PSEN1-204ENST00000394164 OR52E5Q8NH55 327 aa8.12□□□□□ -1.11
PSEN1-204ENST00000394164 Q8TCH9 128 aa8.12□□□□□ -1.11
PSEN1-204ENST00000394164 DCHS2Q6V1P9 2916 aa8.12□□□□□ -1.11
PSEN1-204ENST00000394164 TRGV10A0A0A0MS01 117 aa8.12□□□□□ -1.11
PSEN1-204ENST00000394164 FBLL1A6NHQ2 334 aaKnown RBP8.12□□□□□ -1.11
PSEN1-204ENST00000394164 VWC2Q2TAL6 325 aa8.12□□□□□ -1.11
PSEN1-204ENST00000394164 OR4A16Q8NH70 328 aa8.12□□□□□ -1.11
PSEN1-204ENST00000394164 RND1Q92730 232 aa8.12□□□□□ -1.11
PSEN1-204ENST00000394164 GTSF1LQ9H1H1 148 aa8.12□□□□□ -1.11
PSEN1-204ENST00000394164 PLEKHA3Q9HB20 300 aa8.12□□□□□ -1.11
PSEN1-204ENST00000394164 PIGBOS1A0A0B4J2F0 54 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 H3BUT2 72 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 DUTP33316 252 aaKnown RBP8.11□□□□□ -1.11
PSEN1-204ENST00000394164 PAX2Q02962 417 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 FAM71F2Q6NXP2 309 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 C5orf17Q8NAS9 161 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 TMEM116Q8NCL8 245 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 RAB1CQ92928 201 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 TMEM186Q96B77 213 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 AP1S3Q96PC3 154 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 PTPRBP23467 1997 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 SRRM5B3KS81 715 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 IGLC1P0CG04 106 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 OPRK1P41145 380 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 TNFAIP6P98066 277 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-204ENST00000394164 SAMD13Q5VXD3 122 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 MBNL2Q5VZF2 373 aaKnown RBP8.11□□□□□ -1.11
PSEN1-204ENST00000394164 HSD17B10Q99714 261 aaKnown RBP8.11□□□□□ -1.11
PSEN1-204ENST00000394164 PEF1Q9UBV8 284 aaKnown RBP8.11□□□□□ -1.11
PSEN1-204ENST00000394164 NAV3Q8IVL0 2385 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 REG1BP48304 166 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 ZNF137PP52743 207 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 SMAGPQ0VAQ4 97 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 C12orf54Q6X4T0 127 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 FAM90A1Q86YD7 464 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 RBMXL3Q8N7X1 1067 aaKnown RBP8.11□□□□□ -1.11
PSEN1-204ENST00000394164 C1orf162Q8NEQ5 155 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-204ENST00000394164 JMJD8Q96S16 334 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 CALYQ9NYX4 217 aa8.11□□□□□ -1.11
PSEN1-204ENST00000394164 C9JCJ5 164 aa8.1□□□□□ -1.11
PSEN1-204ENST00000394164 CSN3P07498 182 aa8.1□□□□□ -1.11
PSEN1-204ENST00000394164 IGFBP2P18065 325 aa8.1□□□□□ -1.11
PSEN1-204ENST00000394164 RPL24P83731 157 aaKnown RBP8.1□□□□□ -1.11
PSEN1-204ENST00000394164 MOB3BQ86TA1 216 aa8.1□□□□□ -1.11
PSEN1-204ENST00000394164 S1PR3Q99500 378 aa8.1□□□□□ -1.11
PSEN1-204ENST00000394164 MAP1AP78559 2803 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-204ENST00000394164 MBD3L4A6NDZ8 208 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-204ENST00000394164 MBD3L3A6NE82 208 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-204ENST00000394164 MBD3L5A6NJ08 208 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-204ENST00000394164 MGST3O14880 152 aa8.1□□□□□ -1.11
PSEN1-204ENST00000394164 REG1AP05451 166 aa8.1□□□□□ -1.11
PSEN1-204ENST00000394164 TCF15Q12870 199 aa8.1□□□□□ -1.11
PSEN1-204ENST00000394164 EIF4EBP1Q13541 118 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-204ENST00000394164 PRR30Q53SZ7 412 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-204ENST00000394164 MBD3L2Q8NHZ7 208 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-204ENST00000394164 ABHD17AQ96GS6 310 aa8.1□□□□□ -1.11
PSEN1-204ENST00000394164 NPVFQ9HCQ7 196 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms