RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 MT-ND6P03923 174 aa8.85□□□□□ -0.99
BRF1-204ENST00000392557 AMY1AP04745 511 aa8.85□□□□□ -0.99
BRF1-204ENST00000392557 LINC00869P0C866 280 aa8.85□□□□□ -0.99
BRF1-204ENST00000392557 LINC00310P59036 64 aa8.85□□□□□ -0.99
BRF1-204ENST00000392557 PRR7Q8TB68 274 aa8.85□□□□□ -0.99
BRF1-204ENST00000392557 H1FXQ92522 213 aaKnown RBP8.85□□□□□ -0.99
BRF1-204ENST00000392557 ST6GALNAC6Q969X2 333 aa8.85□□□□□ -0.99
BRF1-204ENST00000392557 GNB1LQ9BYB4 327 aa8.85□□□□□ -0.99
BRF1-204ENST00000392557 UQCR10Q9UDW1 63 aa8.85□□□□□ -0.99
BRF1-204ENST00000392557 J3KRW8 73 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 ENSAO43768 121 aaKnown RBP8.84□□□□□ -0.99
BRF1-204ENST00000392557 ZNF324O75467 553 aaPredicted RBP8.84□□□□□ -0.99
BRF1-204ENST00000392557 C3orf79P0CE67 100 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 SELENOTP62341 195 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 C1orf229Q6ZS94 237 aaPredicted RBP8.84□□□□□ -0.99
BRF1-204ENST00000392557 IGFBPL1Q8WX77 278 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 CCL17Q92583 94 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 IDI2-AS1Q9NZ38 188 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 RNF7Q9UBF6 113 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 ARL2-SNX15V9GYD0 113 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 GGTLC3B5MD39 225 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 FOXA3P55318 350 aaPredicted RBP8.84□□□□□ -0.99
BRF1-204ENST00000392557 ERHP84090 104 aaKnown RBP8.84□□□□□ -0.99
BRF1-204ENST00000392557 KLHDC1Q8N7A1 406 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 OR52E5Q8NH55 327 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 HARBI1Q96MB7 349 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 CDC42EP3Q9UKI2 254 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 PRNDQ9UKY0 176 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 TLN2Q9Y4G6 2542 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 FAM90A27PA6NNH2 459 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 C9JCJ5 164 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 HLA-DQA1P01909 254 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 REG1AP05451 166 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 C8orf88P0DMB2 117 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 BMI1P35226 326 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 CX3CL1P78423 397 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 FAM90A1Q86YD7 464 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 FAM168AQ92567 244 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 AMMECR1Q9Y4X0 333 aaPredicted RBP8.84□□□□□ -0.99
BRF1-204ENST00000392557 POLQO75417 2590 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 DOPEY2Q9Y3R5 2298 aa8.84□□□□□ -0.99
BRF1-204ENST00000392557 TET2Q6N021 2002 aaPredicted RBP8.84□□□□□ -0.99
BRF1-204ENST00000392557 GOSR1O95249 250 aa8.83□□□□□ -1
BRF1-204ENST00000392557 AREGP15514 252 aa8.83□□□□□ -1
BRF1-204ENST00000392557 ZNF137PP52743 207 aa8.83□□□□□ -1
BRF1-204ENST00000392557 RPL8P62917 257 aaKnown RBP8.83□□□□□ -1
BRF1-204ENST00000392557 C1orf174Q8IYL3 243 aa8.83□□□□□ -1
BRF1-204ENST00000392557 LSM4Q9Y4Z0 139 aaKnown RBP8.83□□□□□ -1
BRF1-204ENST00000392557 K7ENP7 123 aa8.83□□□□□ -1
BRF1-204ENST00000392557 PMCHL1Q16048 86 aa8.83□□□□□ -1
BRF1-204ENST00000392557 NEUROG1Q92886 237 aa8.83□□□□□ -1
BRF1-204ENST00000392557 RAB9BQ9NP90 201 aa8.83□□□□□ -1
BRF1-204ENST00000392557 LAMTOR2Q9Y2Q5 125 aa8.83□□□□□ -1
BRF1-204ENST00000392557 DYSFO75923 2080 aa8.83□□□□□ -1
BRF1-204ENST00000392557 TRBV9A0A0B4J1U6 114 aa8.83□□□□□ -1
BRF1-204ENST00000392557 BMPR1BO00238 502 aa8.83□□□□□ -1
BRF1-204ENST00000392557 GNG5P63218 68 aa8.83□□□□□ -1
BRF1-204ENST00000392557 TMEM136Q6ZRR5 245 aa8.83□□□□□ -1
BRF1-204ENST00000392557 FAM169BQ8N8A8 192 aa8.83□□□□□ -1
BRF1-204ENST00000392557 CELSR1Q9NYQ6 3014 aa8.83□□□□□ -1
BRF1-204ENST00000392557 APOA2P02652 100 aa8.82□□□□□ -1
BRF1-204ENST00000392557 SLC25A5P05141 298 aaKnown RBP8.82□□□□□ -1
BRF1-204ENST00000392557 LOXL3P58215 753 aa8.82□□□□□ -1
BRF1-204ENST00000392557 RBPJQ06330 500 aa8.82□□□□□ -1
BRF1-204ENST00000392557 Q0VG73 95 aa8.82□□□□□ -1
BRF1-204ENST00000392557 SLAQ13239 276 aa8.82□□□□□ -1
BRF1-204ENST00000392557 NPIPB3Q92617 1050 aa8.82□□□□□ -1
BRF1-204ENST00000392557 PAXXQ9BUH6 204 aa8.82□□□□□ -1
BRF1-204ENST00000392557 DYNLRB1Q9NP97 96 aa8.82□□□□□ -1
BRF1-204ENST00000392557 CSPG4Q6UVK1 2322 aa8.82□□□□□ -1
BRF1-204ENST00000392557 TRAV9-1A0A075B6T8 112 aa8.82□□□□□ -1
BRF1-204ENST00000392557 KBTBD11-OT1A0A1B0GTJ5 212 aa8.82□□□□□ -1
BRF1-204ENST00000392557 NDUFS8O00217 210 aa8.82□□□□□ -1
BRF1-204ENST00000392557 OR10X1Q8NGY0 326 aa8.82□□□□□ -1
BRF1-204ENST00000392557 TPPP3Q9BW30 176 aa8.82□□□□□ -1
BRF1-204ENST00000392557 ZNF835Q9Y2P0 537 aa8.82□□□□□ -1
BRF1-204ENST00000392557 IGLV3-9A0A075B6K5 115 aa8.82□□□□□ -1
BRF1-204ENST00000392557 IGKV1OR2-108A0A075B7D4 117 aa8.82□□□□□ -1
BRF1-204ENST00000392557 MMP23AO75900 390 aa8.82□□□□□ -1
BRF1-204ENST00000392557 CD24P25063 80 aa8.82□□□□□ -1
BRF1-204ENST00000392557 VAMP3Q15836 100 aa8.82□□□□□ -1
BRF1-204ENST00000392557 C10orf55Q5SWW7 151 aa8.82□□□□□ -1
BRF1-204ENST00000392557 C10orf113Q5VZT2 155 aa8.82□□□□□ -1
BRF1-204ENST00000392557 UNQ5815/PRO19632Q6UWF5 114 aa8.82□□□□□ -1
BRF1-204ENST00000392557 STPG4Q8N801 248 aa8.82□□□□□ -1
BRF1-204ENST00000392557 OR1B1Q8NGR6 318 aa8.82□□□□□ -1
BRF1-204ENST00000392557 TSKUQ8WUA8 353 aa8.82□□□□□ -1
BRF1-204ENST00000392557 DAZAP1Q96EP5 407 aaKnown RBP8.82□□□□□ -1
BRF1-204ENST00000392557 C1orf159Q96HA4 380 aa8.82□□□□□ -1
BRF1-204ENST00000392557 OSTCQ9NRP0 149 aa8.82□□□□□ -1
BRF1-204ENST00000392557 SSUH2Q9Y2M2 353 aa8.82□□□□□ -1
BRF1-204ENST00000392557 FAM90A9PA6NNJ1 464 aa8.81□□□□□ -1
BRF1-204ENST00000392557 M0QZ24 198 aa8.81□□□□□ -1
BRF1-204ENST00000392557 HYPMO75409 117 aa8.81□□□□□ -1
BRF1-204ENST00000392557 CSN3P07498 182 aa8.81□□□□□ -1
BRF1-204ENST00000392557 SAA1P0DJI8 122 aaPredicted RBP8.81□□□□□ -1
BRF1-204ENST00000392557 TNXAQ16473 311 aa8.81□□□□□ -1
BRF1-204ENST00000392557 TMEM249Q2WGJ8 235 aa8.81□□□□□ -1
BRF1-204ENST00000392557 SAP30LQ9HAJ7 183 aa8.81□□□□□ -1
BRF1-204ENST00000392557 PTPN13Q12923 2485 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms