RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 VPS29Q9UBQ0 182 aa0.29□□□□□ -2.36
RNU6-550P-201ENST00000391057 AHNAK2Q8IVF2 5795 aa0.29□□□□□ -2.36
RNU6-550P-201ENST00000391057 M0R036 132 aa0.28□□□□□ -2.36
RNU6-550P-201ENST00000391057 CCL25O15444 150 aa0.28□□□□□ -2.36
RNU6-550P-201ENST00000391057 AHSA1O95433 338 aa0.28□□□□□ -2.36
RNU6-550P-201ENST00000391057 RBP1P09455 135 aa0.28□□□□□ -2.36
RNU6-550P-201ENST00000391057 CASP1P29466 404 aa0.28□□□□□ -2.36
RNU6-550P-201ENST00000391057 EFNA4P52798 201 aa0.28□□□□□ -2.36
RNU6-550P-201ENST00000391057 NKX2-5P52952 324 aaPredicted RBP0.28□□□□□ -2.36
RNU6-550P-201ENST00000391057 PSG9Q00887 426 aa0.28□□□□□ -2.36
RNU6-550P-201ENST00000391057 SRSF6Q13247 344 aaKnown RBP0.28□□□□□ -2.36
RNU6-550P-201ENST00000391057 ESRGQ1W209 222 aa0.28□□□□□ -2.36
RNU6-550P-201ENST00000391057 FAM74A1Q5RGS3 127 aa0.28□□□□□ -2.36
RNU6-550P-201ENST00000391057 LINC00301Q8NCQ3 95 aa0.28□□□□□ -2.36
RNU6-550P-201ENST00000391057 DDI1Q8WTU0 396 aa0.28□□□□□ -2.36
RNU6-550P-201ENST00000391057 CYSLTR1Q9Y271 337 aa0.28□□□□□ -2.36
RNU6-550P-201ENST00000391057 A0A087X0T9 212 aa0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 CHP2O43745 196 aa0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 TTRP02766 147 aa0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 IFNA16P05015 189 aa0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 TSNQ15631 228 aaKnown RBP0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 SPRNQ5BIV9 151 aa0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 OR8D4Q8NGM9 314 aa0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 C8orf76Q96K31 380 aa0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 C14orf132Q9NPU4 83 aa0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 TMEM14CQ9P0S9 112 aa0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 UTP11Q9Y3A2 253 aaKnown RBP0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 MYO3BQ8WXR4 1341 aa0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 SNAPC4Q5SXM2 1469 aa0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 PEAK1Q9H792 1746 aa0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 DOCK5Q9H7D0 1870 aa0.27□□□□□ -2.37
RNU6-550P-201ENST00000391057 ZFC3H1O60293 1989 aaKnown RBP0.26□□□□□ -2.37
RNU6-550P-201ENST00000391057 TRBV6-4A0A1B0GX49 114 aa0.26□□□□□ -2.37
RNU6-550P-201ENST00000391057 CCL16O15467 120 aa0.26□□□□□ -2.37
RNU6-550P-201ENST00000391057 SERPINA6P08185 405 aa0.26□□□□□ -2.37
RNU6-550P-201ENST00000391057 ANP32AP39687 249 aaKnown RBP0.26□□□□□ -2.37
RNU6-550P-201ENST00000391057 LINC00322Q6ZN03 302 aaPredicted RBP0.26□□□□□ -2.37
RNU6-550P-201ENST00000391057 LCA10Q71F78 164 aa0.26□□□□□ -2.37
RNU6-550P-201ENST00000391057 C2orf50Q96LR7 162 aa0.26□□□□□ -2.37
RNU6-550P-201ENST00000391057 HIST1H2BLQ99880 126 aa0.26□□□□□ -2.37
RNU6-550P-201ENST00000391057 C10orf95Q9H7T3 257 aa0.26□□□□□ -2.37
RNU6-550P-201ENST00000391057 DOCK3Q8IZD9 2030 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 SCN3AQ9NY46 2000 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 MCM3APO60318 1980 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 E9PCH4 1651 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 COL1A1P02452 1464 aaPredicted RBP0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 OR2T8A6NH00 312 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 CLDN24A6NM45 220 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 C1orf196B1AJZ1 125 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 RHOBP62745 196 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 OR6V1Q8N148 313 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 CLDN22Q8N7P3 220 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 OR2T10Q8NGZ9 312 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 TMEM254Q8TBM7 123 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 WFDC5Q8TCV5 224 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 CMSS1Q9BQ75 279 aaKnown RBP0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 TLNRD1Q9H1K6 362 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 BCL2L10Q9HD36 194 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 UBAP1Q9NZ09 502 aa0.25□□□□□ -2.37
RNU6-550P-201ENST00000391057 NEO1Q92859 1461 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 ROBO3Q96MS0 1386 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 FAM236DA0A1B0GTK5 79 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 TLCD2A6NGC4 264 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 SMIM23A6NLE4 172 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 KLF7O75840 302 aaPredicted RBP0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 CNIH1O95406 144 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 FAM236CP0DP71 79 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 AP3S2P59780 193 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 IAH1Q2TAA2 248 aaPredicted RBP0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 ST6GALNAC3Q8NDV1 305 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 CT55Q8WUE5 264 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 BORCS7Q96B45 105 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 ADAT3Q96EY9 351 aaPredicted RBP0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 DENND4CQ5VZ89 1909 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 ECM29Q5VYK3 1845 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 TAF1LQ8IZX4 1826 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 CNTRLQ7Z7A1 2325 aa0.24□□□□□ -2.37
RNU6-550P-201ENST00000391057 SNRNP200O75643 2136 aaKnown RBP0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 AHNAKQ09666 5890 aaKnown RBP0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 hCG_1818297A0A087WSY0 165 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 IGHV1-58A0A0C4DH39 117 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 TCRBV4S1A1TA0A5B7 111 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 A8MT66 165 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 J3QRK9 145 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 NUPR1O60356 82 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 GADD45GO95257 159 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 DHFRP00374 187 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 PRH1P02810 166 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 SMIM17P0DL12 118 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 PPIBP23284 216 aaKnown RBP0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 IMPG1Q17R60 797 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 C12orf45Q8N5I9 185 aaPredicted RBP0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 GDPD1Q8N9F7 314 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 PLPP5Q8NEB5 264 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 OR2T35Q8NGX2 323 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 FAM172AQ8WUF8 416 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 SLAMF6Q96DU3 332 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 GPER1Q99527 375 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 NIT2Q9NQR4 276 aa0.23□□□□□ -2.37
RNU6-550P-201ENST00000391057 C14orf105Q9NVL8 296 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms