RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 JPT2Q9H910 190 aa12.9□□□□□ -0.34
ALK-201ENST00000389048 TNFRSF6BO95407 300 aa12.9□□□□□ -0.34
ALK-201ENST00000389048 TIMP3P35625 211 aa12.9□□□□□ -0.34
ALK-201ENST00000389048 EFNB3Q15768 340 aa12.9□□□□□ -0.34
ALK-201ENST00000389048 HIST1H2BLQ99880 126 aa12.9□□□□□ -0.34
ALK-201ENST00000389048 MESP1Q9BRJ9 268 aa12.9□□□□□ -0.34
ALK-201ENST00000389048 A0A087WWC5 75 aa12.9□□□□□ -0.35
ALK-201ENST00000389048 C15orf61A6NNL5 157 aa12.9□□□□□ -0.35
ALK-201ENST00000389048 HOXB1P14653 301 aaPredicted RBP12.9□□□□□ -0.35
ALK-201ENST00000389048 GAGE2BQ13066 116 aa12.9□□□□□ -0.35
ALK-201ENST00000389048 MORN2Q502X0 79 aa12.9□□□□□ -0.35
ALK-201ENST00000389048 DEFB121Q5J5C9 76 aa12.9□□□□□ -0.35
ALK-201ENST00000389048 SHANK3Q9BYB0 1731 aa12.9□□□□□ -0.35
ALK-201ENST00000389048 A0A0A6YYD4 124 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 TIMM23O14925 209 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 LY6DQ14210 128 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 SAP30O75446 220 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 ZNF138P52744 262 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 NR2C2APQ86WQ0 139 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 ZNF319Q9P2F9 582 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 ARFGEF1Q9Y6D6 1849 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 TRAV8-3A0A0A6YYJ7 113 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 LAMB2P55268 1798 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 PSG1P11464 419 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 ATXN8Q156A1 80 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 IGKV1D-8A0A087WSZ0 117 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 A0A1W2PRE2 83 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 UBE2CO00762 179 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 IFI27L1Q96BM0 104 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 C1QTNF5Q9BXJ0 243 aa12.89□□□□□ -0.35
ALK-201ENST00000389048 C17orf100A8MU93 164 aa12.88□□□□□ -0.35
ALK-201ENST00000389048 PLNP26678 52 aa12.88□□□□□ -0.35
ALK-201ENST00000389048 HGFACQ04756 655 aa12.88□□□□□ -0.35
ALK-201ENST00000389048 Q8TAT8 98 aa12.88□□□□□ -0.35
ALK-201ENST00000389048 GREM1O60565 184 aa12.88□□□□□ -0.35
ALK-201ENST00000389048 LINC00312Q9Y6C7 94 aa12.88□□□□□ -0.35
ALK-201ENST00000389048 PMS2P5A8MQ11 134 aa12.88□□□□□ -0.35
ALK-201ENST00000389048 BTCP35070 178 aa12.88□□□□□ -0.35
ALK-201ENST00000389048 LCN12Q6JVE5 192 aa12.88□□□□□ -0.35
ALK-201ENST00000389048 FGFBP3Q8TAT2 258 aa12.88□□□□□ -0.35
ALK-201ENST00000389048 UBE2E2Q96LR5 201 aa12.88□□□□□ -0.35
ALK-201ENST00000389048 RCHY1Q96PM5 261 aa12.87□□□□□ -0.35
ALK-201ENST00000389048 SELLP14151 372 aa12.87□□□□□ -0.35
ALK-201ENST00000389048 LAGE3Q14657 143 aa12.87□□□□□ -0.35
ALK-201ENST00000389048 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.87□□□□□ -0.35
ALK-201ENST00000389048 TNFRSF14Q92956 283 aa12.87□□□□□ -0.35
ALK-201ENST00000389048 Q6AWC8 147 aa12.86□□□□□ -0.35
ALK-201ENST00000389048 MTCL1Q9Y4B5 1905 aaKnown RBP12.86□□□□□ -0.35
ALK-201ENST00000389048 TRGV1A0A0A0MS02 117 aa12.86□□□□□ -0.35
ALK-201ENST00000389048 H0YIZ8 118 aa12.86□□□□□ -0.35
ALK-201ENST00000389048 PRB1P04280 392 aa12.86□□□□□ -0.35
ALK-201ENST00000389048 GUSBP1Q15486 140 aa12.86□□□□□ -0.35
ALK-201ENST00000389048 ZNF876PQ49A33 203 aa12.86□□□□□ -0.35
ALK-201ENST00000389048 ACTL10Q5JWF8 245 aa12.86□□□□□ -0.35
ALK-201ENST00000389048 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
ALK-201ENST00000389048 FOXD3Q9UJU5 478 aaPredicted RBP12.86□□□□□ -0.35
ALK-201ENST00000389048 HEATR5BQ9P2D3 2071 aa12.86□□□□□ -0.35
ALK-201ENST00000389048 A0A1B0GW15 77 aa12.86□□□□□ -0.35
ALK-201ENST00000389048 IQCF6A8MYZ5 107 aa12.86□□□□□ -0.35
ALK-201ENST00000389048 PAX8Q06710 450 aa12.86□□□□□ -0.35
ALK-201ENST00000389048 TMEM144Q7Z5S9 345 aa12.86□□□□□ -0.35
ALK-201ENST00000389048 NEU4Q8WWR8 484 aaPredicted RBP12.86□□□□□ -0.35
ALK-201ENST00000389048 ZNF497Q6ZNH5 498 aa12.86□□□□□ -0.35
ALK-201ENST00000389048 BCL6BQ8N143 479 aaPredicted RBP12.86□□□□□ -0.35
ALK-201ENST00000389048 USP54Q70EL1 1684 aa12.86□□□□□ -0.35
ALK-201ENST00000389048 PINLYPA6NC86 204 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 LINC00205P59089 165 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 HIST3H2BBQ8N257 126 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 FAM57AQ8TBR7 257 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 LINC00477Q96M19 166 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 AMBPP02760 352 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 KLF17Q5JT82 389 aaPredicted RBP12.85□□□□□ -0.35
ALK-201ENST00000389048 GAGE2AQ6NT46 116 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 LYZL1Q6UWQ5 148 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 TMEM86BQ8N661 226 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 TMEM30BQ3MIR4 351 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 A0A087WWL8 130 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 PTPRFP10586 1907 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 UNC13CQ8NB66 2214 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 MRAPQ8TCY5 172 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 SLC25A39Q9BZJ4 359 aaPredicted RBP12.85□□□□□ -0.35
ALK-201ENST00000389048 TMEM133Q9H2Q1 129 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 GLRX5Q86SX6 157 aa12.85□□□□□ -0.35
ALK-201ENST00000389048 TRBV6-7A0A0A0MS04 114 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 DLEU1O43261 78 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 PSCAO43653 123 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 TRAV3A0A0B4J244 114 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 A0A1B0GTI1 187 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 ESDP10768 282 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 VMO1Q7Z5L0 202 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 CFHR3Q02985 330 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 LY6G6FQ5SQ64 297 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 BRD3OSQ6XYD6 125 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 CACNG8Q8WXS5 425 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 WBP1Q96G27 269 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 ITGB1BP1O14713 200 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 TRAV13-1A0A0B4J241 112 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 FCN3O75636 299 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 C2orf82Q6UX34 121 aa12.84□□□□□ -0.35
ALK-201ENST00000389048 SPRR3Q9UBC9 169 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms