RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ASCL3Q9NQ33 180 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 SLC39A9Q9NUM3 307 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 NHP2Q9NX24 153 aaKnown RBP-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 EURLQ9NYK6 297 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 OPTCQ9UBM4 332 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 SETXQ7Z333 2677 aaKnown RBP-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 MED13LQ71F56 2210 aa-0.54□□□□□ -2.5
SNORD28-201ENST00000384706 KMT2AQ03164 3969 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 TTC41PQ6P2S7 1318 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 ABCA1O95477 2261 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 TRAV9-1A0A075B6T8 112 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 TRAV10A0A0B4J240 114 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 GOLGA6L7A0A1B0GV03 622 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 DISC1C4P0D8 188 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 F5H768 121 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 GADD45GO95257 159 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 CST4P01036 141 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 PRM1P04553 51 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 DDTP30046 118 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 ETV6P41212 452 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 CAV3P56539 151 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 MAP3K7CLP57077 242 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 CXCR4P61073 352 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 RPL37AP61513 92 aaKnown RBP-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 TNNC1P63316 161 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 CAV1Q03135 178 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 C18orf21Q32NC0 220 aaPredicted RBP-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 COQ5Q5HYK3 327 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 C4orf22Q6V702 233 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 SLC51BQ86UW2 128 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 RIBC1Q8N443 379 aaPredicted RBP-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 OR8D4Q8NGM9 314 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 OR2T35Q8NGX2 323 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 CANT1Q8WVQ1 401 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 RMND5BQ96G75 393 aaPredicted RBP-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 SERPINB11Q96P15 392 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 RBP7Q96R05 134 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 GPER1Q99527 375 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 IMUPQ9GZP8 106 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 WDR61Q9GZS3 305 aaKnown RBP-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 FAM96AQ9H5X1 160 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 IDI2-AS1Q9NZ38 188 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 TP73-AS1Q9UF72 201 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 MRM2Q9UI43 246 aaKnown RBP-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 DKKL1Q9UK85 242 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 PCTPQ9UKL6 214 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 BOKQ9UMX3 212 aaPredicted RBP-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 ERGIC3Q9Y282 383 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 BZW2Q9Y6E2 419 aaKnown RBP-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 UNC13BO14795 1591 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 PKD1L1Q8TDX9 2849 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 NBEAL1Q6ZS30 2694 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 CHD9Q3L8U1 2897 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 ERBINQ96RT1 1412 aa-0.55□□□□□ -2.5
SNORD28-201ENST00000384706 DOCK4Q8N1I0 1966 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 EP300Q09472 2414 aaPredicted RBP-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 LAMA5O15230 3695 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 NF1P21359 2839 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 CCRL2O00421 344 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 TOX3O15405 576 aaPredicted RBP-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 OTCP00480 354 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 TYMSP04818 313 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 SLC35E2BP0CK96 405 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 CXCL8P10145 99 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 MAP2K4P45985 399 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 CDC42P60953 191 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 HBA1P69905 142 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 GUK1Q16774 197 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 RBM48Q5RL73 367 aaKnown RBP-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 GLYATL3Q5SZD4 288 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 FAM45BPQ6NSW5 357 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 PATE2Q6UY27 113 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 IDO2Q6ZQW0 420 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 Q6ZS49 121 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 ZCCHC23Q6ZST2 131 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 OR5D14Q8NGL3 314 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 OR2T10Q8NGZ9 312 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 JOSD2Q8TAC2 188 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 Q8TAT8 98 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 MRPL30Q8TCC3 161 aaKnown RBP-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 ZNF431Q8TF32 576 aaPredicted RBP-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 H1FXQ92522 213 aaKnown RBP-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 CNBD2Q96M20 576 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 DERL2Q9GZP9 239 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 MS4A6AQ9H2W1 248 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 TCEAL2Q9H3H9 227 aaPredicted RBP-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 BCL2L10Q9HD36 194 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 OSTCQ9NRP0 149 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 UBAP1Q9NZ09 502 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 UTP11Q9Y3A2 253 aaKnown RBP-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 F5P12259 2224 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 PTPRDP23468 1912 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 MIA2Q96PC5 1412 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 CSPG4Q6UVK1 2322 aa-0.56□□□□□ -2.5
SNORD28-201ENST00000384706 LPAP08519 4548 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 SCN8AQ9UQD0 1980 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 ARHGEF11O15085 1522 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 SPTBN1Q01082 2364 aaKnown RBP-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 C7orf71A4D174 169 aa-0.57□□□□□ -2.5
SNORD28-201ENST00000384706 H0YIV9 168 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms