RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 DCUN1D4Q92564 292 aa9.7□□□□□ -0.86
SMN1-202ENST00000380707 ZNF414Q96IQ9 312 aa9.7□□□□□ -0.86
SMN1-202ENST00000380707 GAR1Q9NY12 217 aaKnown RBP9.7□□□□□ -0.86
SMN1-202ENST00000380707 NOTCH3Q9UM47 2321 aa9.69□□□□□ -0.86
SMN1-202ENST00000380707 G3V3Q6 166 aa9.69□□□□□ -0.86
SMN1-202ENST00000380707 NUPL2O15504 423 aaKnown RBP9.69□□□□□ -0.86
SMN1-202ENST00000380707 IGKV1-17P01599 117 aa9.69□□□□□ -0.86
SMN1-202ENST00000380707 SYNJ2BPP57105 145 aa9.69□□□□□ -0.86
SMN1-202ENST00000380707 NHLH2Q02577 135 aa9.69□□□□□ -0.86
SMN1-202ENST00000380707 FGL1Q08830 312 aa9.69□□□□□ -0.86
SMN1-202ENST00000380707 STX12Q86Y82 276 aa9.69□□□□□ -0.86
SMN1-202ENST00000380707 GPHB5Q86YW7 130 aa9.69□□□□□ -0.86
SMN1-202ENST00000380707 WFDC9Q8NEX5 89 aa9.69□□□□□ -0.86
SMN1-202ENST00000380707 SLC35E1Q96K37 410 aa9.69□□□□□ -0.86
SMN1-202ENST00000380707 IGKV1OR2-108A0A075B7D4 117 aa9.68□□□□□ -0.86
SMN1-202ENST00000380707 SMLR1H3BR10 107 aa9.68□□□□□ -0.86
SMN1-202ENST00000380707 IGLC1P0CG04 106 aa9.68□□□□□ -0.86
SMN1-202ENST00000380707 OR10J1P30954 320 aa9.68□□□□□ -0.86
SMN1-202ENST00000380707 EWSR1Q01844 656 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMN1-202ENST00000380707 SLC38A11Q08AI6 406 aa9.68□□□□□ -0.86
SMN1-202ENST00000380707 TIGITQ495A1 244 aa9.68□□□□□ -0.86
SMN1-202ENST00000380707 UNQ9165/PRO28630Q6UXU0 137 aa9.68□□□□□ -0.86
SMN1-202ENST00000380707 SLC25A31Q9H0C2 315 aa9.68□□□□□ -0.86
SMN1-202ENST00000380707 IGKV1D-37A0A075B6S9 117 aa9.67□□□□□ -0.86
SMN1-202ENST00000380707 SMCO3A2RU48 225 aa9.67□□□□□ -0.86
SMN1-202ENST00000380707 RPL12P30050 165 aaKnown RBP9.67□□□□□ -0.86
SMN1-202ENST00000380707 DLK1P80370 383 aa9.67□□□□□ -0.86
SMN1-202ENST00000380707 TREML4Q6UXN2 200 aa9.67□□□□□ -0.86
SMN1-202ENST00000380707 C1QL4Q86Z23 238 aa9.67□□□□□ -0.86
SMN1-202ENST00000380707 OR1S2Q8NGQ3 325 aa9.67□□□□□ -0.86
SMN1-202ENST00000380707 GGACTQ9BVM4 153 aa9.67□□□□□ -0.86
SMN1-202ENST00000380707 NOTCH1P46531 2555 aa9.67□□□□□ -0.86
SMN1-202ENST00000380707 IGHV3OR16-8A0A075B7F1 116 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 TRAV30A0A087WSZ9 112 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 ZNF320A2RRD8 509 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 OVOL1O14753 267 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 CD33P20138 364 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 S100A11P31949 105 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 HBG1P69891 147 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 HBG2P69892 147 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 ZNF90Q03938 601 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 AKR1C1Q04828 323 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 RELQ04864 619 aaPredicted RBP9.66□□□□□ -0.86
SMN1-202ENST00000380707 FAM106AQ4KMX7 169 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 TMEM144Q7Z5S9 345 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 THAP8Q8NA92 274 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 RCC1LQ96I51 464 aaKnown RBP9.66□□□□□ -0.86
SMN1-202ENST00000380707 ST6GAL2Q96JF0 529 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 ZFP92A6NM28 416 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 FNDC10F2Z333 226 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 LGALS9O00182 355 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 NDUFA4O00483 81 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 YIF1AO95070 293 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 SCAF4O95104 1147 aaKnown RBP9.66□□□□□ -0.86
SMN1-202ENST00000380707 BAXQ07812 192 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 IL34Q6ZMJ4 242 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 ZNF546Q86UE3 836 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 LILRB2Q8N423 598 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 OR9G4Q8NGQ1 327 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 OR5C1Q8NGR4 320 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 NPVFQ9HCQ7 196 aa9.66□□□□□ -0.86
SMN1-202ENST00000380707 PUS1Q9Y606 427 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMN1-202ENST00000380707 FXYD6-FXYD2A0A087WZ82 144 aa9.65□□□□□ -0.86
SMN1-202ENST00000380707 SCGB2A1O75556 95 aa9.65□□□□□ -0.86
SMN1-202ENST00000380707 EDN2P20800 178 aa9.65□□□□□ -0.86
SMN1-202ENST00000380707 YPEL3P61236 119 aaPredicted RBP9.65□□□□□ -0.86
SMN1-202ENST00000380707 VWC2Q2TAL6 325 aa9.65□□□□□ -0.86
SMN1-202ENST00000380707 TM4SF20Q53R12 229 aa9.65□□□□□ -0.86
SMN1-202ENST00000380707 TOMM20LQ6UXN7 152 aa9.65□□□□□ -0.86
SMN1-202ENST00000380707 ZNF600Q6ZNG1 722 aa9.65□□□□□ -0.86
SMN1-202ENST00000380707 REC114Q7Z4M0 266 aa9.65□□□□□ -0.86
SMN1-202ENST00000380707 TMEM190Q8WZ59 177 aa9.65□□□□□ -0.86
SMN1-202ENST00000380707 TRGV9Q99603 122 aa9.65□□□□□ -0.86
SMN1-202ENST00000380707 ZFAND3Q9H8U3 227 aa9.65□□□□□ -0.86
SMN1-202ENST00000380707 UQCC1Q9NVA1 299 aa9.65□□□□□ -0.86
SMN1-202ENST00000380707 HSPB11Q9Y547 144 aa9.65□□□□□ -0.86
SMN1-202ENST00000380707 RD3LP0DJH9 198 aa9.64□□□□□ -0.87
SMN1-202ENST00000380707 PSG1P11464 419 aa9.64□□□□□ -0.87
SMN1-202ENST00000380707 IGLL1P15814 213 aa9.64□□□□□ -0.87
SMN1-202ENST00000380707 CLINT1Q14677 625 aa9.64□□□□□ -0.87
SMN1-202ENST00000380707 ATP6V1FQ16864 119 aa9.64□□□□□ -0.87
SMN1-202ENST00000380707 TEPPQ6URK8 271 aa9.64□□□□□ -0.87
SMN1-202ENST00000380707 OR11H4Q8NGC9 324 aa9.64□□□□□ -0.87
SMN1-202ENST00000380707 AQP10Q96PS8 301 aa9.64□□□□□ -0.87
SMN1-202ENST00000380707 C20orf24Q9BUV8 137 aa9.64□□□□□ -0.87
SMN1-202ENST00000380707 TNFSF18Q9UNG2 199 aa9.64□□□□□ -0.87
SMN1-202ENST00000380707 LSM4Q9Y4Z0 139 aaKnown RBP9.64□□□□□ -0.87
SMN1-202ENST00000380707 TMEM213A2RRL7 107 aa9.63□□□□□ -0.87
SMN1-202ENST00000380707 A8MWP6 167 aa9.63□□□□□ -0.87
SMN1-202ENST00000380707 SEC14L6B5MCN3 397 aa9.63□□□□□ -0.87
SMN1-202ENST00000380707 ZNF207O43670 478 aaKnown RBP9.63□□□□□ -0.87
SMN1-202ENST00000380707 TOMM40O96008 361 aa9.63□□□□□ -0.87
SMN1-202ENST00000380707 CSN3P07498 182 aa9.63□□□□□ -0.87
SMN1-202ENST00000380707 CD300CQ08708 224 aa9.63□□□□□ -0.87
SMN1-202ENST00000380707 ADAMTSL5Q6ZMM2 481 aa9.63□□□□□ -0.87
SMN1-202ENST00000380707 TMEM182Q6ZP80 229 aaPredicted RBP9.63□□□□□ -0.87
SMN1-202ENST00000380707 AKAP14Q86UN6 197 aa9.63□□□□□ -0.87
SMN1-202ENST00000380707 INO80EQ8NBZ0 244 aaPredicted RBP9.63□□□□□ -0.87
SMN1-202ENST00000380707 Q8WTZ3 238 aa9.63□□□□□ -0.87
SMN1-202ENST00000380707 TMEM147Q9BVK8 224 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms