RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 BRWD3Q6RI45 1802 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 LINC00614P0C842 121 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 TIMP3P35625 211 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 FAM166AQ6J272 317 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 HEPN1Q6WQI6 88 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 VSIRQ9H7M9 311 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 POLEQ07864 2286 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 TRBV24-1A0A075B6N3 115 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 IGKV1-27A0A075B6S5 117 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 TRAV1-1A0A0B4J248 108 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 NDUFA3O95167 84 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 CD7P09564 240 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 ZNF418Q8TF45 676 aaPredicted RBP13.29□□□□□ -0.28
COL2A1-202ENST00000380518 PLSCR4Q9NRQ2 329 aa13.29□□□□□ -0.28
COL2A1-202ENST00000380518 STAG3L3P0CL85 134 aa13.28□□□□□ -0.28
COL2A1-202ENST00000380518 C8orf46Q8TAG6 207 aa13.28□□□□□ -0.28
COL2A1-202ENST00000380518 GGTLC1Q9BX51 225 aa13.28□□□□□ -0.28
COL2A1-202ENST00000380518 ST20Q9HBF5 79 aa13.28□□□□□ -0.28
COL2A1-202ENST00000380518 SCN8AQ9UQD0 1980 aa13.28□□□□□ -0.28
COL2A1-202ENST00000380518 TRGV2A0A075B6R0 118 aa13.28□□□□□ -0.28
COL2A1-202ENST00000380518 DUSP14O95147 198 aaKnown RBP13.28□□□□□ -0.28
COL2A1-202ENST00000380518 CD59P13987 128 aa13.28□□□□□ -0.28
COL2A1-202ENST00000380518 TSKUQ8WUA8 353 aa13.28□□□□□ -0.28
COL2A1-202ENST00000380518 PRSS22Q9GZN4 317 aa13.28□□□□□ -0.28
COL2A1-202ENST00000380518 PCP4P48539 62 aa13.28□□□□□ -0.28
COL2A1-202ENST00000380518 DMRTA1Q5VZB9 504 aa13.28□□□□□ -0.28
COL2A1-202ENST00000380518 TMEM167AQ8TBQ9 72 aa13.28□□□□□ -0.28
COL2A1-202ENST00000380518 DPH3Q96FX2 82 aa13.27□□□□□ -0.28
COL2A1-202ENST00000380518 TOMM7Q9P0U1 55 aa13.27□□□□□ -0.28
COL2A1-202ENST00000380518 TRAV9-2A0A087WT02 112 aa13.27□□□□□ -0.29
COL2A1-202ENST00000380518 C5orf30Q96GV9 206 aa13.27□□□□□ -0.29
COL2A1-202ENST00000380518 CYTL1Q9NRR1 136 aa13.27□□□□□ -0.29
COL2A1-202ENST00000380518 LINC00587B1AMM8 73 aa13.27□□□□□ -0.29
COL2A1-202ENST00000380518 PSPNO60542 156 aa13.27□□□□□ -0.29
COL2A1-202ENST00000380518 OR10W1Q8NGF6 305 aa13.27□□□□□ -0.29
COL2A1-202ENST00000380518 TMEM190Q8WZ59 177 aa13.27□□□□□ -0.29
COL2A1-202ENST00000380518 VCX2Q9H322 139 aa13.27□□□□□ -0.29
COL2A1-202ENST00000380518 LCTP09848 1927 aa13.27□□□□□ -0.29
COL2A1-202ENST00000380518 GREB1Q4ZG55 1949 aa13.27□□□□□ -0.29
COL2A1-202ENST00000380518 IFI27P40305 119 aaPredicted RBP13.27□□□□□ -0.29
COL2A1-202ENST00000380518 SRSF1Q07955 248 aaKnown RBP eCLIP13.27□□□□□ -0.29
COL2A1-202ENST00000380518 NMSQ5H8A3 153 aa13.26□□□□□ -0.29
COL2A1-202ENST00000380518 LOC285556D6RIA3 1793 aa13.26□□□□□ -0.29
COL2A1-202ENST00000380518 IL18BPO95998 194 aa13.26□□□□□ -0.29
COL2A1-202ENST00000380518 CNTFRP26992 372 aa13.26□□□□□ -0.29
COL2A1-202ENST00000380518 CACNG7P62955 275 aa13.26□□□□□ -0.29
COL2A1-202ENST00000380518 ATP5L2Q7Z4Y8 100 aa13.26□□□□□ -0.29
COL2A1-202ENST00000380518 GLMPQ8WWB7 406 aa13.26□□□□□ -0.29
COL2A1-202ENST00000380518 COQ2Q96H96 371 aa13.26□□□□□ -0.29
COL2A1-202ENST00000380518 UBE2CO00762 179 aa13.26□□□□□ -0.29
COL2A1-202ENST00000380518 FBLN7Q53RD9 439 aa13.26□□□□□ -0.29
COL2A1-202ENST00000380518 LDLRAD2Q5SZI1 272 aa13.26□□□□□ -0.29
COL2A1-202ENST00000380518 C1QL4Q86Z23 238 aa13.26□□□□□ -0.29
COL2A1-202ENST00000380518 TSPAN13O95857 204 aa13.26□□□□□ -0.29
COL2A1-202ENST00000380518 CYSLTR1Q9Y271 337 aa13.26□□□□□ -0.29
COL2A1-202ENST00000380518 SELLP14151 372 aa13.25□□□□□ -0.29
COL2A1-202ENST00000380518 ORMDL2Q53FV1 153 aa13.25□□□□□ -0.29
COL2A1-202ENST00000380518 PDCD11Q14690 1871 aaKnown RBP13.25□□□□□ -0.29
COL2A1-202ENST00000380518 SPTAN1Q13813 2472 aaKnown RBP13.25□□□□□ -0.29
COL2A1-202ENST00000380518 F2Z2F3 143 aa13.25□□□□□ -0.29
COL2A1-202ENST00000380518 C10orf55Q5SWW7 151 aa13.25□□□□□ -0.29
COL2A1-202ENST00000380518 OR5AN1Q8NGI8 311 aa13.25□□□□□ -0.29
COL2A1-202ENST00000380518 PNRC2Q9NPJ4 139 aaKnown RBP13.25□□□□□ -0.29
COL2A1-202ENST00000380518 A0A1B0GW64 132 aa13.24□□□□□ -0.29
COL2A1-202ENST00000380518 DPM2O94777 84 aa13.24□□□□□ -0.29
COL2A1-202ENST00000380518 CHCHD1Q96BP2 118 aaKnown RBP13.24□□□□□ -0.29
COL2A1-202ENST00000380518 CLPSP04118 112 aa13.24□□□□□ -0.29
COL2A1-202ENST00000380518 ZNF672Q499Z4 452 aaPredicted RBP13.24□□□□□ -0.29
COL2A1-202ENST00000380518 TMEM42Q69YG0 159 aa13.24□□□□□ -0.29
COL2A1-202ENST00000380518 KLHDC3Q9BQ90 382 aa13.24□□□□□ -0.29
COL2A1-202ENST00000380518 TRAV5A0A0B4J249 113 aa13.24□□□□□ -0.29
COL2A1-202ENST00000380518 IGKV1-5P01602 117 aa13.24□□□□□ -0.29
COL2A1-202ENST00000380518 PAX8Q06710 450 aa13.24□□□□□ -0.29
COL2A1-202ENST00000380518 TMEM14EPQ6UXP3 125 aa13.24□□□□□ -0.29
COL2A1-202ENST00000380518 RPP25LQ8N5L8 163 aaKnown RBP13.24□□□□□ -0.29
COL2A1-202ENST00000380518 HIST1H2BLQ99880 126 aa13.24□□□□□ -0.29
COL2A1-202ENST00000380518 IGHV2-26A0A0B4J1V2 119 aa13.23□□□□□ -0.29
COL2A1-202ENST00000380518 VDAC2P45880 294 aaPredicted RBP13.23□□□□□ -0.29
COL2A1-202ENST00000380518 NYNRINQ9P2P1 1898 aaKnown RBP13.23□□□□□ -0.29
COL2A1-202ENST00000380518 WNT2P09544 360 aa13.23□□□□□ -0.29
COL2A1-202ENST00000380518 SPACA3Q8IXA5 215 aa13.23□□□□□ -0.29
COL2A1-202ENST00000380518 COLCA2A8K830 154 aa13.23□□□□□ -0.29
COL2A1-202ENST00000380518 H3BUT2 72 aa13.23□□□□□ -0.29
COL2A1-202ENST00000380518 OVOL1O14753 267 aa13.23□□□□□ -0.29
COL2A1-202ENST00000380518 TYMSP04818 313 aa13.23□□□□□ -0.29
COL2A1-202ENST00000380518 C10orf126Q8N4M7 172 aa13.23□□□□□ -0.29
COL2A1-202ENST00000380518 TRBV7-9A0A0J9YWB2 115 aa13.23□□□□□ -0.29
COL2A1-202ENST00000380518 CA1P00915 261 aaPredicted RBP13.23□□□□□ -0.29
COL2A1-202ENST00000380518 NBASA2RRP1 2371 aa13.23□□□□□ -0.29
COL2A1-202ENST00000380518 TRBV6-6A0A0A6YYG2 114 aa13.22□□□□□ -0.29
COL2A1-202ENST00000380518 PPIFP30405 207 aaKnown RBP13.22□□□□□ -0.29
COL2A1-202ENST00000380518 FOXL1Q12952 345 aa13.22□□□□□ -0.29
COL2A1-202ENST00000380518 STHQ8IWL8 128 aa13.22□□□□□ -0.29
COL2A1-202ENST00000380518 WNK2Q9Y3S1 2297 aa13.22□□□□□ -0.29
COL2A1-202ENST00000380518 A0A1W2PRX2 142 aa13.22□□□□□ -0.29
COL2A1-202ENST00000380518 IGHV1-8P0DP01 117 aa13.22□□□□□ -0.29
COL2A1-202ENST00000380518 NUDT10Q8NFP7 164 aa13.22□□□□□ -0.29
COL2A1-202ENST00000380518 SLC25A48Q6ZT89 311 aaKnown RBP13.22□□□□□ -0.29
COL2A1-202ENST00000380518 SLC25A15Q9Y619 301 aa13.22□□□□□ -0.29
COL2A1-202ENST00000380518 RNF5Q99942 180 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms