RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 ATXN8Q156A1 80 aa8□□□□□ -1.13
SNX1-202ENST00000380285 LINC01551Q86U37 167 aa8□□□□□ -1.13
SNX1-202ENST00000380285 RNF125Q96EQ8 232 aa8□□□□□ -1.13
SNX1-202ENST00000380285 IGKV1-9A0A0C4DH69 117 aa8□□□□□ -1.13
SNX1-202ENST00000380285 LAGE3Q14657 143 aa8□□□□□ -1.13
SNX1-202ENST00000380285 PPP1R27Q86WC6 154 aa8□□□□□ -1.13
SNX1-202ENST00000380285 IGKV1D-13A0A0B4J2D9 117 aa8□□□□□ -1.13
SNX1-202ENST00000380285 H3BTX0 84 aa8□□□□□ -1.13
SNX1-202ENST00000380285 IGKV1-13P0DP09 117 aa8□□□□□ -1.13
SNX1-202ENST00000380285 NBR2O15453 112 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 PSG7Q13046 419 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 MGST2Q99735 147 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 ATXN7O15265 892 aaPredicted RBP7.99□□□□□ -1.13
SNX1-202ENST00000380285 PAX2Q02962 417 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 MRPL20Q9BYC9 149 aaKnown RBP7.99□□□□□ -1.13
SNX1-202ENST00000380285 PSG8Q9UQ74 426 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 GAGE2BQ13066 116 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 GAGE2EQ4V326 116 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 CDCP2Q5VXM1 449 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 GAGE2DQ9UEU5 116 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 CEP290O15078 2479 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 DUSP14O95147 198 aaKnown RBP7.99□□□□□ -1.13
SNX1-202ENST00000380285 IMMP1LQ96LU5 166 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 SLC25A39Q9BZJ4 359 aaPredicted RBP7.99□□□□□ -1.13
SNX1-202ENST00000380285 NMSQ5H8A3 153 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 TMEM14EPQ6UXP3 125 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 LYPD1Q8N2G4 141 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 SUPT4H1P63272 117 aaKnown RBP7.99□□□□□ -1.13
SNX1-202ENST00000380285 S100A7L2Q5SY68 101 aa7.99□□□□□ -1.13
SNX1-202ENST00000380285 PHF3Q92576 2039 aaKnown RBP7.99□□□□□ -1.13
SNX1-202ENST00000380285 A0A0A6YYD4 124 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 ESDP10768 282 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 KIR3DL3Q8N743 410 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 SNAI2O43623 268 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 MORN3Q6PF18 240 aaPredicted RBP7.98□□□□□ -1.13
SNX1-202ENST00000380285 GFRA4Q9GZZ7 299 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 FBXL15Q9H469 300 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 IGKV3D-15A0A087WSY6 115 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 NDUFS6O75380 124 aaKnown RBP7.98□□□□□ -1.13
SNX1-202ENST00000380285 IGKV3-15P01624 115 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 SDK2Q58EX2 2172 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 LOC102723996A0A087X1L8 192 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 GZMBP10144 247 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 RNF5Q99942 180 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 TRPM7Q96QT4 1865 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 OVOL1O14753 267 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 RAMP3O60896 148 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 NAPSAO96009 420 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 TREML4Q6UXN2 200 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 LYZL4Q96KX0 146 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 TRGV9Q99603 122 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 GGTLC1Q9BX51 225 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 BRWD3Q6RI45 1802 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 DLX4Q92988 240 aaPredicted RBP7.98□□□□□ -1.13
SNX1-202ENST00000380285 ERG28Q9UKR5 140 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 SPTA1P02549 2419 aa7.98□□□□□ -1.13
SNX1-202ENST00000380285 C9orf172C9J069 976 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 IGKV1D-33P01593 117 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 IGKV1-33P01594 117 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 SLC25A15Q9Y619 301 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 HEATR5AQ86XA9 2040 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 ZNF815PA8K554 130 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 CD5LO43866 347 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 PLEKHB2Q96CS7 222 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 POLEQ07864 2286 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 TRGV11A0A075B6L2 103 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 PATE3B3GLJ2 98 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 TFF2Q03403 129 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 SRSF6Q13247 344 aaKnown RBP7.97□□□□□ -1.13
SNX1-202ENST00000380285 VKORC1Q9BQB6 163 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 INTS1Q8N201 2190 aaKnown RBP7.97□□□□□ -1.13
SNX1-202ENST00000380285 C17orf100A8MU93 164 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 CRYGSP22914 178 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 C20orf144Q9BQM9 153 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 MED12Q93074 2177 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 TGFBR3LH3BV60 316 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 Q0VG73 95 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 PYY3Q5JQD4 70 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 TMEM133Q9H2Q1 129 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 PEMTQ9UBM1 199 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 ABCA7Q8IZY2 2146 aa7.97□□□□□ -1.13
SNX1-202ENST00000380285 IGHV3-48P01763 117 aa7.96□□□□□ -1.13
SNX1-202ENST00000380285 CTSBP07858 339 aa7.96□□□□□ -1.13
SNX1-202ENST00000380285 STPG1Q5TH74 334 aa7.96□□□□□ -1.13
SNX1-202ENST00000380285 LHX2P50458 406 aa7.96□□□□□ -1.13
SNX1-202ENST00000380285 THADAQ6YHU6 1953 aa7.96□□□□□ -1.13
SNX1-202ENST00000380285 CADP27708 2225 aa7.96□□□□□ -1.14
SNX1-202ENST00000380285 ST6GALNAC3Q8NDV1 305 aa7.96□□□□□ -1.14
SNX1-202ENST00000380285 DUX3Q96PT4 197 aa7.96□□□□□ -1.14
SNX1-202ENST00000380285 CT83Q5H943 113 aa7.96□□□□□ -1.14
SNX1-202ENST00000380285 KLF17Q5JT82 389 aaPredicted RBP7.96□□□□□ -1.14
SNX1-202ENST00000380285 CD55P08174 381 aa7.96□□□□□ -1.14
SNX1-202ENST00000380285 RNASE4P34096 147 aaKnown RBP7.96□□□□□ -1.14
SNX1-202ENST00000380285 TMEM95Q3KNT9 176 aa7.96□□□□□ -1.14
SNX1-202ENST00000380285 MRPL14Q6P1L8 145 aaKnown RBP7.96□□□□□ -1.14
SNX1-202ENST00000380285 GGTLC3B5MD39 225 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 M0R2P5 195 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 RFPL3SP0C7P2 107 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 IGHV1-2P23083 117 aa7.95□□□□□ -1.14
SNX1-202ENST00000380285 GFI1BQ5VTD9 330 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms