RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.32□□□□□ -0.92
SMAD9-202ENST00000379826 MDS2Q8NDY4 140 aa9.32□□□□□ -0.92
SMAD9-202ENST00000379826 V9GYV3 84 aa9.32□□□□□ -0.92
SMAD9-202ENST00000379826 FAM186AA6NE01 2351 aa9.32□□□□□ -0.92
SMAD9-202ENST00000379826 FRMD6-AS1P0C7T7 363 aa9.32□□□□□ -0.92
SMAD9-202ENST00000379826 CX3CL1P78423 397 aa9.32□□□□□ -0.92
SMAD9-202ENST00000379826 ALKBH7Q9BT30 221 aaPredicted RBP9.32□□□□□ -0.92
SMAD9-202ENST00000379826 GP6Q9HCN6 339 aa9.32□□□□□ -0.92
SMAD9-202ENST00000379826 ZNF785A8K8V0 405 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 NUDT3O95989 172 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 AREGP15514 252 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 KIR2DL2P43627 348 aaPredicted RBP9.31□□□□□ -0.92
SMAD9-202ENST00000379826 TWIST1Q15672 202 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 NUP35Q8NFH5 326 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 SLC25A33Q9BSK2 321 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 C1orf174Q8IYL3 243 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 PYGO2Q9BRQ0 406 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 NBEAP1P0C6P0 100 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 VDAC2P45880 294 aaPredicted RBP9.31□□□□□ -0.92
SMAD9-202ENST00000379826 FAM90A1Q86YD7 464 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 HILPDAQ9Y5L2 63 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 F11RQ9Y624 299 aaKnown RBP9.31□□□□□ -0.92
SMAD9-202ENST00000379826 SRRM5B3KS81 715 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 CD69Q07108 199 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 Q9H3A6 140 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 SELENOKQ9Y6D0 94 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 CHD3Q12873 2000 aaKnown RBP9.31□□□□□ -0.92
SMAD9-202ENST00000379826 SELENOTP62341 195 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 MBNL2Q5VZF2 373 aaKnown RBP9.31□□□□□ -0.92
SMAD9-202ENST00000379826 TMEM136Q6ZRR5 245 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 KIR3DL3Q8N743 410 aa9.31□□□□□ -0.92
SMAD9-202ENST00000379826 TRAV9-2A0A087WT02 112 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 hDV102S1A0JD36 115 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 PMS2P5A8MQ11 134 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 GNG7O60262 68 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 ORM1P02763 201 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 C15orf65H3BRN8 121 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 Q6ZVH6 145 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 CACNA1DQ01668 2161 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 CDH23Q9H251 3354 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 A0A1W2PRE2 83 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 IGHV3-23P01764 117 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 APOHP02749 345 aaPredicted RBP9.3□□□□□ -0.92
SMAD9-202ENST00000379826 FCGR2BP31994 310 aaPredicted RBP9.3□□□□□ -0.92
SMAD9-202ENST00000379826 SPRNQ5BIV9 151 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 PLA2G2CQ5R387 149 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 WFDC3Q8IUB2 231 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 NDFIP1Q9BT67 221 aa9.3□□□□□ -0.92
SMAD9-202ENST00000379826 J3KRW8 73 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 DSCR9P59020 149 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 YPEL3P61236 119 aaPredicted RBP9.29□□□□□ -0.92
SMAD9-202ENST00000379826 C1orf162Q8NEQ5 155 aaPredicted RBP9.29□□□□□ -0.92
SMAD9-202ENST00000379826 BMI1P35226 326 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 GLRXP35754 106 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 ZNF138P52744 262 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 DAZAP2Q15038 168 aaPredicted RBP9.29□□□□□ -0.92
SMAD9-202ENST00000379826 FBLN7Q53RD9 439 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 CENPVQ7Z7K6 275 aaPredicted RBP9.29□□□□□ -0.92
SMAD9-202ENST00000379826 OSR1Q8TAX0 266 aaPredicted RBP9.29□□□□□ -0.92
SMAD9-202ENST00000379826 EPDR1Q9UM22 224 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 PRSS1P07477 247 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 CEACAM3P40198 252 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 PI4KAP42356 2102 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 SSBP2P81877 361 aaPredicted RBP9.29□□□□□ -0.92
SMAD9-202ENST00000379826 SLAQ13239 276 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 TPTE2P1Q5T6R2 138 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 DYNLRB2Q8TF09 96 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 TMEM189A5PLL7 270 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 GGTLC3B5MD39 225 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 VWC2Q2TAL6 325 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 C11orf53Q8IXP5 236 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 C20orf144Q9BQM9 153 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 Q0VG73 95 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 ZNF329Q86UD4 541 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 SLC25A2Q9BXI2 301 aa9.29□□□□□ -0.92
SMAD9-202ENST00000379826 DNAJC13O75165 2243 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 TCRBV4S1A1TA0A5B7 111 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 GOSR1O95249 250 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 HLA-DRB1P01911 266 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 CLEC3BP05452 202 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 ZFP30Q9Y2G7 519 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 KMT2EQ8IZD2 1858 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 FMC1Q96HJ9 113 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 GAGE10A6NGK3 116 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 IGHV1-46P01743 117 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 TMEM97Q5BJF2 176 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 UFC1Q9Y3C8 167 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 CD40P25942 277 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 COMPP49747 757 aaPredicted RBP9.28□□□□□ -0.92
SMAD9-202ENST00000379826 COA6Q5JTJ3 125 aaKnown RBP9.28□□□□□ -0.92
SMAD9-202ENST00000379826 TEX43Q6ZNM6 134 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 CLEC7AQ9BXN2 247 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 UNC80Q8N2C7 3258 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 CHD7Q9P2D1 2997 aa9.28□□□□□ -0.92
SMAD9-202ENST00000379826 TSPOP30536 169 aa9.27□□□□□ -0.92
SMAD9-202ENST00000379826 FXYD7P58549 80 aa9.27□□□□□ -0.92
SMAD9-202ENST00000379826 TIMM23BQ5SRD1 257 aa9.27□□□□□ -0.92
SMAD9-202ENST00000379826 GAFA1Q96PS6 74 aa9.27□□□□□ -0.92
SMAD9-202ENST00000379826 Q5PR19 223 aa9.27□□□□□ -0.93
SMAD9-202ENST00000379826 TMEM186Q96B77 213 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms