RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 UPK2O00526 184 aa9.48□□□□□ -0.89
PTCHD1-201ENST00000379361 C3orf36Q3SXR2 165 aa9.48□□□□□ -0.89
PTCHD1-201ENST00000379361 TRAV2A0A0B4J234 112 aa9.48□□□□□ -0.89
PTCHD1-201ENST00000379361 H3BMM0 161 aa9.48□□□□□ -0.89
PTCHD1-201ENST00000379361 FAM166AQ6J272 317 aa9.48□□□□□ -0.89
PTCHD1-201ENST00000379361 NKAPP1Q8N9T2 125 aa9.48□□□□□ -0.89
PTCHD1-201ENST00000379361 IFI27L2Q9H2X8 130 aa9.48□□□□□ -0.89
PTCHD1-201ENST00000379361 CBLN1P23435 193 aa9.48□□□□□ -0.89
PTCHD1-201ENST00000379361 CDCP2Q5VXM1 449 aa9.48□□□□□ -0.89
PTCHD1-201ENST00000379361 ZNRF1Q8ND25 227 aa9.48□□□□□ -0.89
PTCHD1-201ENST00000379361 OR11H7Q8NGC8 314 aa9.48□□□□□ -0.89
PTCHD1-201ENST00000379361 RPL39P5Q59GN2 51 aa9.48□□□□□ -0.89
PTCHD1-201ENST00000379361 FDCSPQ8NFU4 85 aa9.48□□□□□ -0.89
PTCHD1-201ENST00000379361 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 IGHV3-11P01762 117 aa9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 ZNF883P0CG24 379 aa9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 ORMDL2Q53FV1 153 aa9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 ZNF106Q9H2Y7 1883 aaKnown RBP9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 COX6A1P12074 109 aa9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 ZXDCQ2QGD7 858 aaPredicted RBP9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 ZNHIT1O43257 154 aa9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 DDTP30046 118 aa9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 LAGE3Q14657 143 aa9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 RPL35AP18077 110 aaKnown RBP9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 IGKV1D-42A0A075B6H8 117 aa9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 A0A1B0GV90 55 aa9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 SS18Q15532 418 aa9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 CLDN16Q9Y5I7 305 aa9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 UBE2WQ96B02 151 aa9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 FOXS1O43638 330 aa9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 EGR4Q05215 589 aa9.47□□□□□ -0.89
PTCHD1-201ENST00000379361 CD5LO43866 347 aa9.46□□□□□ -0.89
PTCHD1-201ENST00000379361 F2Z2F3 143 aa9.46□□□□□ -0.89
PTCHD1-201ENST00000379361 SPSB3Q6PJ21 355 aa9.46□□□□□ -0.89
PTCHD1-201ENST00000379361 LURAP1LQ8IV03 231 aa9.46□□□□□ -0.89
PTCHD1-201ENST00000379361 ATOH7Q8N100 152 aa9.46□□□□□ -0.89
PTCHD1-201ENST00000379361 ADAMTS7Q9UKP4 1686 aa9.46□□□□□ -0.89
PTCHD1-201ENST00000379361 RPL36AP83881 106 aaKnown RBP9.46□□□□□ -0.89
PTCHD1-201ENST00000379361 RPL36ALQ969Q0 106 aaKnown RBP9.46□□□□□ -0.89
PTCHD1-201ENST00000379361 SLC25A47Q6Q0C1 308 aa9.46□□□□□ -0.89
PTCHD1-201ENST00000379361 POC1AQ8NBT0 407 aa9.46□□□□□ -0.89
PTCHD1-201ENST00000379361 CHAC1Q9BUX1 264 aa9.46□□□□□ -0.89
PTCHD1-201ENST00000379361 MSGN1A6NI15 193 aa9.46□□□□□ -0.9
PTCHD1-201ENST00000379361 CTAG1AP78358 180 aa9.46□□□□□ -0.9
PTCHD1-201ENST00000379361 SRSF7Q16629 238 aaKnown RBP eCLIP9.46□□□□□ -0.9
PTCHD1-201ENST00000379361 LHFPL6Q9Y693 200 aa9.46□□□□□ -0.9
PTCHD1-201ENST00000379361 THAP8Q8NA92 274 aa9.46□□□□□ -0.9
PTCHD1-201ENST00000379361 PLEKHB2Q96CS7 222 aa9.46□□□□□ -0.9
PTCHD1-201ENST00000379361 Q96M66 194 aa9.46□□□□□ -0.9
PTCHD1-201ENST00000379361 RASL11AQ6T310 242 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 USMG5Q96IX5 58 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 FOXJ2Q9P0K8 574 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 ELF5Q9UKW6 265 aaPredicted RBP9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 C20orf204Q6ZNR8 217 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 NIT1Q86X76 327 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 LOC101059948A0A1B0GTJ6 334 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 TRAV9-1A0A075B6T8 112 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 CSRP2Q16527 193 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 TEX48A0A1B0GUV7 120 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 MDKP21741 143 aaPredicted RBP9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 DUTP33316 252 aaKnown RBP9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 TRBV7-1A0A0A6YYK4 115 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 A0A1B0GTL3 188 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 C2orf68Q2NKX9 166 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 C5orf30Q96GV9 206 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 ERG28Q9UKR5 140 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 CECR9P0C854 216 aa9.45□□□□□ -0.9
PTCHD1-201ENST00000379361 SRD5A1P18405 259 aa9.44□□□□□ -0.9
PTCHD1-201ENST00000379361 ABHD17AQ96GS6 310 aa9.44□□□□□ -0.9
PTCHD1-201ENST00000379361 C5orf66Q9H5L9 145 aa9.44□□□□□ -0.9
PTCHD1-201ENST00000379361 A8MWV9 139 aa9.44□□□□□ -0.9
PTCHD1-201ENST00000379361 MESP2Q0VG99 397 aa9.44□□□□□ -0.9
PTCHD1-201ENST00000379361 KIAA0040Q15053 153 aa9.44□□□□□ -0.9
PTCHD1-201ENST00000379361 LY75O60449 1722 aa9.44□□□□□ -0.9
PTCHD1-201ENST00000379361 TEX38Q6PEX7 206 aa9.44□□□□□ -0.9
PTCHD1-201ENST00000379361 SAP25Q8TEE9 199 aa9.44□□□□□ -0.9
PTCHD1-201ENST00000379361 PPP1R32Q7Z5V6 425 aa9.44□□□□□ -0.9
PTCHD1-201ENST00000379361 OVOL1O14753 267 aa9.44□□□□□ -0.9
PTCHD1-201ENST00000379361 COL5A3P25940 1745 aaPredicted RBP9.44□□□□□ -0.9
PTCHD1-201ENST00000379361 RHOGP84095 191 aa9.43□□□□□ -0.9
PTCHD1-201ENST00000379361 FUT5Q11128 374 aa9.43□□□□□ -0.9
PTCHD1-201ENST00000379361 FAM181AQ8N9Y4 354 aa9.43□□□□□ -0.9
PTCHD1-201ENST00000379361 CXCL3P19876 107 aa9.43□□□□□ -0.9
PTCHD1-201ENST00000379361 LINC00614P0C842 121 aa9.43□□□□□ -0.9
PTCHD1-201ENST00000379361 PRCDQ00LT1 54 aa9.43□□□□□ -0.9
PTCHD1-201ENST00000379361 PSG1P11464 419 aa9.43□□□□□ -0.9
PTCHD1-201ENST00000379361 KIAA1549LQ6ZVL6 1849 aa9.43□□□□□ -0.9
PTCHD1-201ENST00000379361 IFITM2Q01629 132 aa9.43□□□□□ -0.9
PTCHD1-201ENST00000379361 LCN12Q6JVE5 192 aa9.43□□□□□ -0.9
PTCHD1-201ENST00000379361 IL36BQ9NZH7 164 aa9.43□□□□□ -0.9
PTCHD1-201ENST00000379361 TRAV9-2A0A087WT02 112 aa9.43□□□□□ -0.9
PTCHD1-201ENST00000379361 DANCRP0C864 163 aa9.43□□□□□ -0.9
PTCHD1-201ENST00000379361 ZNF501Q96CX3 271 aaPredicted RBP9.43□□□□□ -0.9
PTCHD1-201ENST00000379361 TRGV1A0A0A0MS02 117 aa9.42□□□□□ -0.9
PTCHD1-201ENST00000379361 IGFBP2P18065 325 aa9.42□□□□□ -0.9
PTCHD1-201ENST00000379361 PUSL1Q8N0Z8 303 aaKnown RBP9.42□□□□□ -0.9
PTCHD1-201ENST00000379361 SLC22A18ASQ8N1D0 253 aa9.42□□□□□ -0.9
PTCHD1-201ENST00000379361 ANKRD17O75179 2603 aaKnown RBP9.42□□□□□ -0.9
PTCHD1-201ENST00000379361 ZNF561-AS1K7EIQ3 104 aa9.42□□□□□ -0.9
PTCHD1-201ENST00000379361 RNF125Q96EQ8 232 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms