RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 RNASE7Q9H1E1 156 aaKnown RBP6.98□□□□□ -1.29
VPS36-201ENST00000378060 VSIRQ9H7M9 311 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 EPDR1Q9UM22 224 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 LY96Q9Y6Y9 160 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 COL27A1Q8IZC6 1860 aaPredicted RBP6.98□□□□□ -1.29
VPS36-201ENST00000378060 SAA2-SAA4A0A096LPE2 208 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 SAA2P0DJI9 122 aaPredicted RBP6.98□□□□□ -1.29
VPS36-201ENST00000378060 FAM106AQ4KMX7 169 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 ATP5L2Q7Z4Y8 100 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 LINC01551Q86U37 167 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 FGFBP3Q8TAT2 258 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 PRR7Q8TB68 274 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 DOPEY2Q9Y3R5 2298 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 POLEQ07864 2286 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 CELA3BP08861 270 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 HTN1P15515 57 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 GATA2P23769 480 aaPredicted RBP6.98□□□□□ -1.29
VPS36-201ENST00000378060 PYY3Q5JQD4 70 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 TREML4Q6UXN2 200 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 FOXL2NBQ6ZUU3 175 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 KLHDC3Q9BQ90 382 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 GGTLC1Q9BX51 225 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 Q9H3A6 140 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 DEPPQ9NTK1 212 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 CLDN16Q9Y5I7 305 aa6.98□□□□□ -1.29
VPS36-201ENST00000378060 PRRC2CQ9Y520 2896 aaKnown RBP6.97□□□□□ -1.29
VPS36-201ENST00000378060 DSPP15924 2871 aaKnown RBP6.97□□□□□ -1.29
VPS36-201ENST00000378060 TCRBV4S1A1TA0A5B7 111 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 ADCYAP1P18509 176 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 TSPOP30536 169 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 DLX6P56179 175 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 C1orf194Q5T5A4 169 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 GGNQ86UU5 652 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 FBXL15Q9H469 300 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 C21orf62Q9NYP8 219 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 F11RQ9Y624 299 aaKnown RBP6.97□□□□□ -1.29
VPS36-201ENST00000378060 HEATR5AQ86XA9 2040 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 C17orf100A8MU93 164 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 IGKV1-5P01602 117 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 GPX1P07203 203 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 ATP5G2Q06055 141 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 COPS9Q8WXC6 57 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 OR9G9P0C7N8 305 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 LGALS3P17931 250 aaKnown RBP6.97□□□□□ -1.29
VPS36-201ENST00000378060 FOXF2Q12947 444 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 GFI1BQ5VTD9 330 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 RASL11AQ6T310 242 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 DYNLRB2Q8TF09 96 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 FER1L5A0AVI2 2057 aa6.97□□□□□ -1.29
VPS36-201ENST00000378060 CGB1A6NKQ9 187 aa6.96□□□□□ -1.29
VPS36-201ENST00000378060 FOXI3A8MTJ6 420 aaPredicted RBP6.96□□□□□ -1.29
VPS36-201ENST00000378060 GFRA1P56159 465 aa6.96□□□□□ -1.29
VPS36-201ENST00000378060 ZNF124Q15973 351 aa6.96□□□□□ -1.29
VPS36-201ENST00000378060 MST1LQ2TV78 715 aa6.96□□□□□ -1.29
VPS36-201ENST00000378060 AMMECR1LQ6DCA0 310 aa6.96□□□□□ -1.29
VPS36-201ENST00000378060 CLEC2AQ6UVW9 174 aa6.96□□□□□ -1.29
VPS36-201ENST00000378060 TSKUQ8WUA8 353 aa6.96□□□□□ -1.29
VPS36-201ENST00000378060 SRRM5B3KS81 715 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 NTN3O00634 580 aaPredicted RBP6.96□□□□□ -1.3
VPS36-201ENST00000378060 PPBPP02775 128 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 PRSS2P07478 247 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 LINC00614P0C842 121 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 FAM201AQ5SY85 155 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 PVRIGQ6DKI7 326 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 CHCHD1Q96BP2 118 aaKnown RBP6.96□□□□□ -1.3
VPS36-201ENST00000378060 PIEZO1Q92508 2521 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 GFRA3O60609 400 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 FAM27E3Q08E93 113 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 FER1L6-AS1Q8NA97 138 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 C9orf106Q8NAJ2 232 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 ST20Q9HBF5 79 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 ANAPC10Q9UM13 185 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 CREBBPQ92793 2442 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 PGPEP1LA6NFU8 196 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 GPR183P32249 361 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 CIRBPQ14011 172 aaKnown RBP6.96□□□□□ -1.3
VPS36-201ENST00000378060 MRPL52Q86TS9 123 aaKnown RBP6.96□□□□□ -1.3
VPS36-201ENST00000378060 LURAP1LQ8IV03 231 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 C5orf30Q96GV9 206 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 TMEM160Q9NX00 188 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 RAXQ9Y2V3 346 aa6.96□□□□□ -1.3
VPS36-201ENST00000378060 TRAV8-6A0A0B4J262 113 aa6.95□□□□□ -1.3
VPS36-201ENST00000378060 OR4X2Q8NGF9 303 aa6.95□□□□□ -1.3
VPS36-201ENST00000378060 RPUSD1Q9UJJ7 312 aaKnown RBP6.95□□□□□ -1.3
VPS36-201ENST00000378060 FOXA2Q9Y261 457 aaPredicted RBP6.95□□□□□ -1.3
VPS36-201ENST00000378060 FABP5P3A8MUU1 101 aa6.95□□□□□ -1.3
VPS36-201ENST00000378060 FOXH1O75593 365 aa6.95□□□□□ -1.3
VPS36-201ENST00000378060 PLAURQ03405 335 aa6.95□□□□□ -1.3
VPS36-201ENST00000378060 GCSAMLQ5JQS6 135 aa6.95□□□□□ -1.3
VPS36-201ENST00000378060 ASCL2Q99929 193 aa6.95□□□□□ -1.3
VPS36-201ENST00000378060 MESP1Q9BRJ9 268 aa6.95□□□□□ -1.3
VPS36-201ENST00000378060 ALKBH7Q9BT30 221 aaPredicted RBP6.95□□□□□ -1.3
VPS36-201ENST00000378060 RSPO3Q9BXY4 272 aaPredicted RBP6.95□□□□□ -1.3
VPS36-201ENST00000378060 SMG1Q96Q15 3661 aaKnown RBP6.95□□□□□ -1.3
VPS36-201ENST00000378060 CHD8Q9HCK8 2581 aa6.95□□□□□ -1.3
VPS36-201ENST00000378060 A0A1W2PNU3 283 aaPredicted RBP6.95□□□□□ -1.3
VPS36-201ENST00000378060 ETV2O00321 342 aaPredicted RBP6.95□□□□□ -1.3
VPS36-201ENST00000378060 FAM159AQ6UWV7 190 aa6.95□□□□□ -1.3
VPS36-201ENST00000378060 DDB2Q92466 427 aa6.95□□□□□ -1.3
VPS36-201ENST00000378060 TNFRSF14Q92956 283 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms