RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 URB1-AS1Q96HZ7 61 aa14.55□□□□□ -0.08
GNE-201ENST00000377902 MRPL27Q9P0M9 148 aaKnown RBP14.55□□□□□ -0.08
GNE-201ENST00000377902 CSMD1Q96PZ7 3565 aa14.55□□□□□ -0.08
GNE-201ENST00000377902 CGB1A6NKQ9 187 aa14.54□□□□□ -0.08
GNE-201ENST00000377902 TNFAIP6P98066 277 aaPredicted RBP14.54□□□□□ -0.08
GNE-201ENST00000377902 ERASQ7Z444 233 aa14.54□□□□□ -0.08
GNE-201ENST00000377902 FAM222BQ8WU58 562 aa14.54□□□□□ -0.08
GNE-201ENST00000377902 GRAMD2BQ96HH9 432 aa14.54□□□□□ -0.08
GNE-201ENST00000377902 GUCD1Q96NT3 240 aa14.54□□□□□ -0.08
GNE-201ENST00000377902 BET1LQ9NYM9 111 aa14.54□□□□□ -0.08
GNE-201ENST00000377902 ABCA1O95477 2261 aa14.54□□□□□ -0.08
GNE-201ENST00000377902 IGKV1D-37A0A075B6S9 117 aa14.54□□□□□ -0.08
GNE-201ENST00000377902 DLL1O00548 723 aa14.54□□□□□ -0.08
GNE-201ENST00000377902 IGHV1-46P01743 117 aa14.54□□□□□ -0.08
GNE-201ENST00000377902 KLHDC1Q8N7A1 406 aa14.54□□□□□ -0.08
GNE-201ENST00000377902 FXYD5Q96DB9 178 aa14.54□□□□□ -0.08
GNE-201ENST00000377902 MRPL32Q9BYC8 188 aaKnown RBP14.54□□□□□ -0.08
GNE-201ENST00000377902 DYSFO75923 2080 aa14.54□□□□□ -0.08
GNE-201ENST00000377902 C20orf202A1L168 122 aa14.53□□□□□ -0.08
GNE-201ENST00000377902 C2orf70A6NJV1 201 aa14.53□□□□□ -0.08
GNE-201ENST00000377902 APELAP0DMC3 54 aa14.53□□□□□ -0.08
GNE-201ENST00000377902 GLRXP35754 106 aa14.53□□□□□ -0.08
GNE-201ENST00000377902 PTTG1IPP53801 180 aa14.53□□□□□ -0.08
GNE-201ENST00000377902 LINC00173Q6ZV60 143 aa14.53□□□□□ -0.08
GNE-201ENST00000377902 WIPF2Q8TF74 440 aaPredicted RBP14.53□□□□□ -0.08
GNE-201ENST00000377902 MAP1BP46821 2468 aaKnown RBP14.53□□□□□ -0.08
GNE-201ENST00000377902 FSTL3O95633 263 aa14.53□□□□□ -0.08
GNE-201ENST00000377902 PRB4P10163 310 aaPredicted RBP14.53□□□□□ -0.08
GNE-201ENST00000377902 CBY1Q9Y3M2 126 aa14.53□□□□□ -0.08
GNE-201ENST00000377902 MOSP00540 346 aa14.52□□□□□ -0.08
GNE-201ENST00000377902 ORM2P19652 201 aa14.52□□□□□ -0.08
GNE-201ENST00000377902 PCP4P48539 62 aa14.52□□□□□ -0.08
GNE-201ENST00000377902 CCL8P80075 99 aa14.52□□□□□ -0.08
GNE-201ENST00000377902 ERHP84090 104 aaKnown RBP14.52□□□□□ -0.08
GNE-201ENST00000377902 LINC00305Q7Z4B0 112 aa14.52□□□□□ -0.08
GNE-201ENST00000377902 OR8B3Q8NGG8 313 aa14.52□□□□□ -0.08
GNE-201ENST00000377902 RNASE8Q8TDE3 154 aaKnown RBP14.52□□□□□ -0.08
GNE-201ENST00000377902 OR8B2Q96RD0 313 aa14.52□□□□□ -0.08
GNE-201ENST00000377902 C7orf69Q9H7B7 122 aa14.52□□□□□ -0.08
GNE-201ENST00000377902 CEP250Q9BV73 2442 aa14.52□□□□□ -0.08
GNE-201ENST00000377902 ZZEF1O43149 2961 aa14.52□□□□□ -0.08
GNE-201ENST00000377902 IGHV3-21A0A0B4J1V1 117 aa14.52□□□□□ -0.09
GNE-201ENST00000377902 H0YJW9 148 aa14.52□□□□□ -0.09
GNE-201ENST00000377902 ZNF788Q6ZQV5 615 aa14.52□□□□□ -0.09
GNE-201ENST00000377902 ZNF714Q96N38 554 aa14.52□□□□□ -0.09
GNE-201ENST00000377902 TPSG1Q9NRR2 321 aa14.52□□□□□ -0.09
GNE-201ENST00000377902 TRAV9-2A0A087WT02 112 aa14.51□□□□□ -0.09
GNE-201ENST00000377902 FCN3O75636 299 aa14.51□□□□□ -0.09
GNE-201ENST00000377902 UBE2G1P62253 170 aa14.51□□□□□ -0.09
GNE-201ENST00000377902 FAM231DQ6ZW35 169 aa14.51□□□□□ -0.09
GNE-201ENST00000377902 RITA1Q96K30 269 aa14.51□□□□□ -0.09
GNE-201ENST00000377902 MCRIP2Q9BUT9 160 aaKnown RBP14.51□□□□□ -0.09
GNE-201ENST00000377902 TACC2O95359 2948 aa14.51□□□□□ -0.09
GNE-201ENST00000377902 BDP1A6H8Y1 2624 aa14.51□□□□□ -0.09
GNE-201ENST00000377902 SP9P0CG40 484 aa14.51□□□□□ -0.09
GNE-201ENST00000377902 Q71RC1 249 aaPredicted RBP14.51□□□□□ -0.09
GNE-201ENST00000377902 OR4F17Q8NGA8 305 aa14.51□□□□□ -0.09
GNE-201ENST00000377902 CACNG8Q8WXS5 425 aa14.51□□□□□ -0.09
GNE-201ENST00000377902 SAP30LQ9HAJ7 183 aa14.51□□□□□ -0.09
GNE-201ENST00000377902 RAB9BQ9NP90 201 aa14.51□□□□□ -0.09
GNE-201ENST00000377902 COLQQ9Y215 455 aaPredicted RBP14.51□□□□□ -0.09
GNE-201ENST00000377902 IGLV3-9A0A075B6K5 115 aa14.5□□□□□ -0.09
GNE-201ENST00000377902 IGHV2-26A0A0B4J1V2 119 aa14.5□□□□□ -0.09
GNE-201ENST00000377902 PGPA6NDG6 321 aa14.5□□□□□ -0.09
GNE-201ENST00000377902 KLF5Q13887 457 aaPredicted RBP14.5□□□□□ -0.09
GNE-201ENST00000377902 LEMD1Q68G75 181 aa14.5□□□□□ -0.09
GNE-201ENST00000377902 ZNF833PQ6ZTB9 187 aa14.5□□□□□ -0.09
GNE-201ENST00000377902 NCOR1P1Q9H4R4 102 aa14.5□□□□□ -0.09
GNE-201ENST00000377902 SLC25A5P05141 298 aaKnown RBP14.5□□□□□ -0.09
GNE-201ENST00000377902 RBMXL3Q8N7X1 1067 aaKnown RBP14.5□□□□□ -0.09
GNE-201ENST00000377902 ZNF430Q9H8G1 570 aaPredicted RBP14.5□□□□□ -0.09
GNE-201ENST00000377902 TCRBV4S1A1TA0A5B7 111 aa14.49□□□□□ -0.09
GNE-201ENST00000377902 GATA4P43694 442 aa14.49□□□□□ -0.09
GNE-201ENST00000377902 ZNF137PP52743 207 aa14.49□□□□□ -0.09
GNE-201ENST00000377902 HCP5Q6MZN7 132 aa14.49□□□□□ -0.09
GNE-201ENST00000377902 OR1B1Q8NGR6 318 aa14.49□□□□□ -0.09
GNE-201ENST00000377902 GTSF1Q8WW33 167 aa14.49□□□□□ -0.09
GNE-201ENST00000377902 FLYWCH2Q96CP2 140 aaKnown RBP14.49□□□□□ -0.09
GNE-201ENST00000377902 PLA2G2CQ5R387 149 aa14.49□□□□□ -0.09
GNE-201ENST00000377902 SSX8Q7RTT4 187 aa14.49□□□□□ -0.09
GNE-201ENST00000377902 OSR1Q8TAX0 266 aaPredicted RBP14.49□□□□□ -0.09
GNE-201ENST00000377902 ORAOV1Q8WV07 137 aa14.49□□□□□ -0.09
GNE-201ENST00000377902 PGLYRP4Q96LB8 373 aa14.49□□□□□ -0.09
GNE-201ENST00000377902 LINC00574Q9H8X3 128 aa14.49□□□□□ -0.09
GNE-201ENST00000377902 EPDR1Q9UM22 224 aa14.49□□□□□ -0.09
GNE-201ENST00000377902 MRPS16Q9Y3D3 137 aaKnown RBP14.49□□□□□ -0.09
GNE-201ENST00000377902 TRAV17A0A0B4J275 112 aa14.48□□□□□ -0.09
GNE-201ENST00000377902 APOA2P02652 100 aa14.48□□□□□ -0.09
GNE-201ENST00000377902 ZNF138P52744 262 aa14.48□□□□□ -0.09
GNE-201ENST00000377902 FAM120AOSQ5T036 256 aa14.48□□□□□ -0.09
GNE-201ENST00000377902 RASL11AQ6T310 242 aa14.48□□□□□ -0.09
GNE-201ENST00000377902 COX11Q9Y6N1 276 aa14.48□□□□□ -0.09
GNE-201ENST00000377902 A0A1B0GXF2 115 aa14.48□□□□□ -0.09
GNE-201ENST00000377902 hDV102S1A0JD36 115 aa14.48□□□□□ -0.09
GNE-201ENST00000377902 C22orf46C9J442 243 aa14.48□□□□□ -0.09
GNE-201ENST00000377902 HIST1H1EP10412 219 aaKnown RBP14.48□□□□□ -0.09
GNE-201ENST00000377902 MYCNOSP40205 109 aa14.48□□□□□ -0.09
GNE-201ENST00000377902 FAM27E3Q08E93 113 aa14.48□□□□□ -0.09
GNE-201ENST00000377902 TIMM23BQ5SRD1 257 aa14.48□□□□□ -0.09
GNE-201ENST00000377902 GSX1Q9H4S2 264 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms