RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 ASCL2Q99929 193 aa14.71□□□□□ -0.05
CLSTN1-202ENST00000377298 PLXNA4Q9HCM2 1894 aa14.71□□□□□ -0.05
CLSTN1-202ENST00000377298 RNF144BQ7Z419 303 aa14.71□□□□□ -0.06
CLSTN1-202ENST00000377298 SDF2L1Q9HCN8 221 aa14.71□□□□□ -0.06
CLSTN1-202ENST00000377298 MBNL3Q9NUK0 354 aaKnown RBP14.71□□□□□ -0.06
CLSTN1-202ENST00000377298 LINC00587B1AMM8 73 aa14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 BUB1B-PAK6H3BSN5 160 aa14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 C10orf55Q5SWW7 151 aa14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 STHQ8IWL8 128 aa14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 CCL20P78556 96 aa14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 TRAV9-1A0A075B6T8 112 aa14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 SP5Q6BEB4 398 aaPredicted RBP14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 FAM71F2Q6NXP2 309 aa14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 TRGV2A0A075B6R0 118 aa14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 FABP5P3A8MUU1 101 aa14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 H0YJW9 148 aa14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 CBLN1P23435 193 aa14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 EFNB3Q15768 340 aa14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 BPESC1Q9GZL8 116 aa14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 TNFRSF18Q9Y5U5 241 aa14.7□□□□□ -0.06
CLSTN1-202ENST00000377298 HOXA5P20719 270 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 SPATA45Q537H7 98 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 SLC17A3O00476 420 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 TNFSF13O75888 250 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 C5orf64Q2M2E5 130 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 NMSQ5H8A3 153 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 KCNS1Q96KK3 526 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 EPDR1Q9UM22 224 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 ANAPC1Q9H1A4 1944 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 RPRMLQ8N4K4 120 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 FER1L6-AS1Q8NA97 138 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 A0A087WWC5 75 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 TMEM238LA0A1B0GVL6 79 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 A6NJY4 79 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 H3BUX3 64 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 RNASE4P34096 147 aaKnown RBP14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 TMEM136Q6ZRR5 245 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 VOPP1Q96AW1 172 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 REG4Q9BYZ8 158 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 GEMIN7Q9H840 131 aaKnown RBP14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 FRMPD3Q5JV73 1810 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 TMEM190Q8WZ59 177 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 GBF1Q92538 1859 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 KLK15Q9H2R5 256 aa14.69□□□□□ -0.06
CLSTN1-202ENST00000377298 PSMB11A5LHX3 300 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 LYPD2Q6UXB3 125 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 TREML4Q6UXN2 200 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 GTSCR1Q86UQ5 136 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 PRTN3P24158 256 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 LEPP41159 167 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 TMEM219Q86XT9 240 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 PRELID3AQ96N28 172 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 LINC00527Q9UJ94 153 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 C1QTNF9BB2RNN3 333 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 IGKV1-5P01602 117 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 C1QTNF9P0C862 333 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 LEMD1Q68G75 181 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 C15orf32Q32M92 178 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 LINC01356Q8N9X3 169 aa14.68□□□□□ -0.06
CLSTN1-202ENST00000377298 TMEM101Q96IK0 257 aa14.67□□□□□ -0.06
CLSTN1-202ENST00000377298 UQCR10Q9UDW1 63 aa14.67□□□□□ -0.06
CLSTN1-202ENST00000377298 NOTCH4Q99466 2003 aa14.67□□□□□ -0.06
CLSTN1-202ENST00000377298 GRIFINA4D1Z8 144 aa14.67□□□□□ -0.06
CLSTN1-202ENST00000377298 PYYP10082 97 aa14.67□□□□□ -0.06
CLSTN1-202ENST00000377298 SPSB3Q6PJ21 355 aa14.67□□□□□ -0.06
CLSTN1-202ENST00000377298 BRD3OSQ6XYD6 125 aa14.67□□□□□ -0.06
CLSTN1-202ENST00000377298 ITGB1BP1O14713 200 aa14.67□□□□□ -0.06
CLSTN1-202ENST00000377298 GATA4P43694 442 aa14.67□□□□□ -0.06
CLSTN1-202ENST00000377298 A0A1B0GWJ7 208 aa14.66□□□□□ -0.06
CLSTN1-202ENST00000377298 J3QKU1 62 aa14.66□□□□□ -0.06
CLSTN1-202ENST00000377298 LY6HO94772 140 aa14.66□□□□□ -0.06
CLSTN1-202ENST00000377298 FOXA3P55318 350 aaPredicted RBP14.66□□□□□ -0.06
CLSTN1-202ENST00000377298 RPL24P83731 157 aaKnown RBP14.66□□□□□ -0.06
CLSTN1-202ENST00000377298 MBD3L1Q8WWY6 194 aa14.66□□□□□ -0.06
CLSTN1-202ENST00000377298 WFDC1Q9HC57 220 aa14.66□□□□□ -0.06
CLSTN1-202ENST00000377298 CFPP27918 469 aa14.66□□□□□ -0.06
CLSTN1-202ENST00000377298 Q8TCH9 128 aa14.66□□□□□ -0.06
CLSTN1-202ENST00000377298 HEATR1Q9H583 2144 aaKnown RBP14.66□□□□□ -0.06
CLSTN1-202ENST00000377298 LGALS3P17931 250 aaKnown RBP14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 HINT1P49773 126 aaPredicted RBP14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 GGTLC1Q9BX51 225 aa14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 TCTAP57738 103 aa14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 RPL23P62829 140 aaKnown RBP14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 GNG5P63218 68 aa14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 CIRBPQ14011 172 aaKnown RBP14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 LINC00473A8K010 186 aa14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 RAB37Q96AX2 223 aa14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 KIAA1671Q9BY89 1806 aa14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 IZUMO1RA6ND01 250 aa14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 GATA3P23771 443 aa14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 MEIG1Q5JSS6 88 aa14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 PSG8Q9UQ74 426 aa14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 SIGLEC9Q9Y336 463 aa14.65□□□□□ -0.06
CLSTN1-202ENST00000377298 TRAV21A0A0B4J279 112 aa14.64□□□□□ -0.07
CLSTN1-202ENST00000377298 A6NNC1 897 aa14.64□□□□□ -0.07
CLSTN1-202ENST00000377298 PLXNA2O75051 1894 aa14.64□□□□□ -0.07
CLSTN1-202ENST00000377298 SUMO2P61956 95 aaKnown RBP14.64□□□□□ -0.07
CLSTN1-202ENST00000377298 OVOL1O14753 267 aa14.64□□□□□ -0.07
CLSTN1-202ENST00000377298 ZNF585BQ52M93 769 aa14.64□□□□□ -0.07
CLSTN1-202ENST00000377298 TMEM14EPQ6UXP3 125 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms