RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 ANKRD39Q53RE8 183 aa11.26□□□□□ -0.61
MCF2L-204ENST00000375608 LINC00173Q6ZV60 143 aa11.26□□□□□ -0.61
MCF2L-204ENST00000375608 NCKAP5O14513 1909 aa11.25□□□□□ -0.61
MCF2L-204ENST00000375608 Q6ZT83 130 aa11.25□□□□□ -0.61
MCF2L-204ENST00000375608 WFDC8Q8IUA0 241 aa11.25□□□□□ -0.61
MCF2L-204ENST00000375608 C11orf53Q8IXP5 236 aa11.25□□□□□ -0.61
MCF2L-204ENST00000375608 GCSAMQ8N6F7 178 aa11.25□□□□□ -0.61
MCF2L-204ENST00000375608 HILPDAQ9Y5L2 63 aa11.25□□□□□ -0.61
MCF2L-204ENST00000375608 VWC2Q2TAL6 325 aa11.25□□□□□ -0.61
MCF2L-204ENST00000375608 SPRNQ5BIV9 151 aa11.25□□□□□ -0.61
MCF2L-204ENST00000375608 EBLN2Q6P2I7 272 aa11.25□□□□□ -0.61
MCF2L-204ENST00000375608 SLC25A33Q9BSK2 321 aa11.25□□□□□ -0.61
MCF2L-204ENST00000375608 S4R3C0 116 aa11.25□□□□□ -0.61
MCF2L-204ENST00000375608 IGHV2OR16-5A0A0B4J2B6 119 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 A8MWL6 223 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 PPOXP50336 477 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 C9orf106Q8NAJ2 232 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 CHRDL1Q9BU40 450 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 TNFRSF19Q9NS68 423 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 YPEL1O60688 119 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 MMP23AO75900 390 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 RIPPLY3P57055 190 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 WDR31Q8NA23 367 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 SARAFQ96BY9 339 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 YPEL2Q96QA6 119 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 MRPL20Q9BYC9 149 aaKnown RBP11.24□□□□□ -0.61
MCF2L-204ENST00000375608 TEX50A0A1B0GTY4 177 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 CNIH1O95406 144 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 CT45A6P0DMU7 189 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 CT45A5P0DMU8 189 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 CT45A7P0DMV0 189 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 RPL24P83731 157 aaKnown RBP11.24□□□□□ -0.61
MCF2L-204ENST00000375608 BHLHA15Q7RTS1 189 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-204ENST00000375608 ADTRPQ96IZ2 230 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 RNF7Q9UBF6 113 aa11.24□□□□□ -0.61
MCF2L-204ENST00000375608 NDUFB8O95169 186 aa11.23□□□□□ -0.61
MCF2L-204ENST00000375608 SSBP2P81877 361 aaPredicted RBP11.23□□□□□ -0.61
MCF2L-204ENST00000375608 DEFB109BQ30KR1 87 aa11.23□□□□□ -0.61
MCF2L-204ENST00000375608 GOLT1AQ6ZVE7 132 aa11.23□□□□□ -0.61
MCF2L-204ENST00000375608 BPIFA4PQ86YQ2 179 aa11.23□□□□□ -0.61
MCF2L-204ENST00000375608 ZPBPQ9BS86 351 aa11.23□□□□□ -0.61
MCF2L-204ENST00000375608 LSM4Q9Y4Z0 139 aaKnown RBP11.23□□□□□ -0.61
MCF2L-204ENST00000375608 F11RQ9Y624 299 aaKnown RBP11.23□□□□□ -0.61
MCF2L-204ENST00000375608 IGKV1OR2-108A0A075B7D4 117 aa11.23□□□□□ -0.61
MCF2L-204ENST00000375608 C15orf65H3BRN8 121 aa11.23□□□□□ -0.61
MCF2L-204ENST00000375608 P0C879 139 aa11.23□□□□□ -0.61
MCF2L-204ENST00000375608 COMPP49747 757 aaPredicted RBP11.23□□□□□ -0.61
MCF2L-204ENST00000375608 HBBP68871 147 aa11.23□□□□□ -0.61
MCF2L-204ENST00000375608 CLEC2AQ6UVW9 174 aa11.23□□□□□ -0.61
MCF2L-204ENST00000375608 SRSF12Q8WXF0 261 aaKnown RBP11.23□□□□□ -0.61
MCF2L-204ENST00000375608 FNDC4Q9H6D8 234 aaPredicted RBP11.23□□□□□ -0.61
MCF2L-204ENST00000375608 NBEAP1P0C6P0 100 aa11.23□□□□□ -0.61
MCF2L-204ENST00000375608 FCER1GP30273 86 aa11.23□□□□□ -0.61
MCF2L-204ENST00000375608 Q8N7P7 452 aa11.23□□□□□ -0.61
MCF2L-204ENST00000375608 GAGE10A6NGK3 116 aa11.22□□□□□ -0.61
MCF2L-204ENST00000375608 SRRM4A7MD48 611 aaKnown RBP11.22□□□□□ -0.61
MCF2L-204ENST00000375608 ZNF891A8MT65 544 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-204ENST00000375608 NMUP48645 174 aa11.22□□□□□ -0.61
MCF2L-204ENST00000375608 SMIM15Q7Z3B0 74 aa11.22□□□□□ -0.61
MCF2L-204ENST00000375608 GRAMD2BQ96HH9 432 aa11.22□□□□□ -0.61
MCF2L-204ENST00000375608 ZNF430Q9H8G1 570 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-204ENST00000375608 KBTBD11-OT1A0A1B0GTJ5 212 aa11.22□□□□□ -0.61
MCF2L-204ENST00000375608 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
MCF2L-204ENST00000375608 CD69Q07108 199 aa11.22□□□□□ -0.61
MCF2L-204ENST00000375608 SRSF6Q13247 344 aaKnown RBP11.22□□□□□ -0.61
MCF2L-204ENST00000375608 FAM222BQ8WU58 562 aa11.22□□□□□ -0.61
MCF2L-204ENST00000375608 ORAOV1Q8WV07 137 aa11.22□□□□□ -0.61
MCF2L-204ENST00000375608 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.22□□□□□ -0.61
MCF2L-204ENST00000375608 NKX6-3A6NJ46 265 aa11.22□□□□□ -0.61
MCF2L-204ENST00000375608 UPK2O00526 184 aa11.22□□□□□ -0.61
MCF2L-204ENST00000375608 C1orf210Q8IVY1 113 aa11.22□□□□□ -0.61
MCF2L-204ENST00000375608 DLL1O00548 723 aa11.21□□□□□ -0.61
MCF2L-204ENST00000375608 DLX1P56177 255 aa11.21□□□□□ -0.61
MCF2L-204ENST00000375608 ARF6P62330 175 aa11.21□□□□□ -0.61
MCF2L-204ENST00000375608 C1orf229Q6ZS94 237 aaPredicted RBP11.21□□□□□ -0.61
MCF2L-204ENST00000375608 Q5PR19 223 aa11.21□□□□□ -0.61
MCF2L-204ENST00000375608 FAM87AP0C7U9 286 aa11.21□□□□□ -0.62
MCF2L-204ENST00000375608 COX7A1P24310 79 aa11.21□□□□□ -0.62
MCF2L-204ENST00000375608 IGHV1-18A0A0C4DH31 117 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 SRRM5B3KS81 715 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 PRCDQ00LT1 54 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 C12orf54Q6X4T0 127 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 CIARTQ8N365 385 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-204ENST00000375608 FDCSPQ8NFU4 85 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 DYNLRB1Q9NP97 96 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 SLC25A10Q9UBX3 287 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-204ENST00000375608 APOHP02749 345 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-204ENST00000375608 PRR20EP86478 221 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 PRR20CP86479 221 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 PRR20DP86480 221 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 PRR20BP86481 221 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 PRR20AP86496 221 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 SAPCD1Q5SSQ6 148 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 FAM90A1Q86YD7 464 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 PERPQ96FX8 193 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 K7ERU9 68 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 SS18L1O75177 396 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-204ENST00000375608 CT45A10P0DMU9 189 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 C11orf52Q96A22 123 aa11.2□□□□□ -0.62
MCF2L-204ENST00000375608 FAM162BQ5T6X4 162 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms