RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 ABI3Q9P2A4 366 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 IGHV3-48P01763 117 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 CCL11P51671 97 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 RIPPLY3P57055 190 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 SLC25A34Q6PIV7 304 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 RASL11AQ6T310 242 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 LHFPL4Q7Z7J7 247 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 WFDC12Q8WWY7 111 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 FAM167A-AS1Q96KT0 104 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 SPRY4Q9C004 299 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 ST20Q9HBF5 79 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 POLEQ07864 2286 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 A0A087X0K7 114 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 IGHV1-24A0A0C4DH33 117 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 SYS1-DBNDD2H3BUS1 97 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 CT45A1Q5HYN5 189 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 OR10W1Q8NGF6 305 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 CT45A3Q8NHU0 189 aa12.88□□□□□ -0.35
PABPC4-202ENST00000372857 KLF13Q9Y2Y9 288 aaPredicted RBP12.88□□□□□ -0.35
PABPC4-202ENST00000372857 NKX2-8O15522 239 aa12.87□□□□□ -0.35
PABPC4-202ENST00000372857 PLAUP00749 431 aa12.87□□□□□ -0.35
PABPC4-202ENST00000372857 SSBP2P81877 361 aaPredicted RBP12.87□□□□□ -0.35
PABPC4-202ENST00000372857 SSX8Q7RTT4 187 aa12.87□□□□□ -0.35
PABPC4-202ENST00000372857 DEFB125Q8N687 156 aa12.87□□□□□ -0.35
PABPC4-202ENST00000372857 DYSFO75923 2080 aa12.87□□□□□ -0.35
PABPC4-202ENST00000372857 AKAP13Q12802 2813 aa12.87□□□□□ -0.35
PABPC4-202ENST00000372857 PEX7O00628 323 aa12.87□□□□□ -0.35
PABPC4-202ENST00000372857 OR2J3O76001 311 aa12.87□□□□□ -0.35
PABPC4-202ENST00000372857 GOSR1O95249 250 aa12.87□□□□□ -0.35
PABPC4-202ENST00000372857 KIR2DS2P43631 304 aa12.87□□□□□ -0.35
PABPC4-202ENST00000372857 ZNF137PP52743 207 aa12.87□□□□□ -0.35
PABPC4-202ENST00000372857 ZNF138P52744 262 aa12.87□□□□□ -0.35
PABPC4-202ENST00000372857 PSG9Q00887 426 aa12.87□□□□□ -0.35
PABPC4-202ENST00000372857 ZNF430Q9H8G1 570 aaPredicted RBP12.87□□□□□ -0.35
PABPC4-202ENST00000372857 TOX4O94842 621 aa12.86□□□□□ -0.35
PABPC4-202ENST00000372857 LEPROTL1O95214 131 aa12.86□□□□□ -0.35
PABPC4-202ENST00000372857 CALYQ9NYX4 217 aa12.86□□□□□ -0.35
PABPC4-202ENST00000372857 SNAI2O43623 268 aa12.86□□□□□ -0.35
PABPC4-202ENST00000372857 OR2Z1Q8NG97 314 aa12.86□□□□□ -0.35
PABPC4-202ENST00000372857 MEGF9Q9H1U4 602 aa12.86□□□□□ -0.35
PABPC4-202ENST00000372857 TRAV8-6A0A0B4J262 113 aa12.86□□□□□ -0.35
PABPC4-202ENST00000372857 FOXE3Q13461 319 aa12.86□□□□□ -0.35
PABPC4-202ENST00000372857 RTL8BQ17RB0 113 aa12.86□□□□□ -0.35
PABPC4-202ENST00000372857 FAM231DQ6ZW35 169 aa12.86□□□□□ -0.35
PABPC4-202ENST00000372857 ZNF329Q86UD4 541 aa12.86□□□□□ -0.35
PABPC4-202ENST00000372857 TNFRSF14Q92956 283 aa12.86□□□□□ -0.35
PABPC4-202ENST00000372857 ZNRD1Q9P1U0 126 aa12.86□□□□□ -0.35
PABPC4-202ENST00000372857 RELNP78509 3460 aa12.85□□□□□ -0.35
PABPC4-202ENST00000372857 IGKV1-16P04430 117 aa12.85□□□□□ -0.35
PABPC4-202ENST00000372857 SMIM12Q96EX1 92 aa12.85□□□□□ -0.35
PABPC4-202ENST00000372857 GAGE12BA1L429 117 aa12.85□□□□□ -0.35
PABPC4-202ENST00000372857 PAXXQ9BUH6 204 aa12.85□□□□□ -0.35
PABPC4-202ENST00000372857 NAV3Q8IVL0 2385 aa12.84□□□□□ -0.35
PABPC4-202ENST00000372857 SRRM4A7MD48 611 aaKnown RBP12.84□□□□□ -0.35
PABPC4-202ENST00000372857 M0R296 226 aa12.84□□□□□ -0.35
PABPC4-202ENST00000372857 MGST3O14880 152 aa12.84□□□□□ -0.35
PABPC4-202ENST00000372857 HIST1H1EP10412 219 aaKnown RBP12.84□□□□□ -0.35
PABPC4-202ENST00000372857 PRCDQ00LT1 54 aa12.84□□□□□ -0.35
PABPC4-202ENST00000372857 WFDC8Q8IUA0 241 aa12.84□□□□□ -0.35
PABPC4-202ENST00000372857 PGLYRP4Q96LB8 373 aa12.84□□□□□ -0.35
PABPC4-202ENST00000372857 NBASA2RRP1 2371 aa12.84□□□□□ -0.35
PABPC4-202ENST00000372857 TRGV5A0A0B4J1U4 118 aa12.84□□□□□ -0.35
PABPC4-202ENST00000372857 A0A1B0GXF2 115 aa12.84□□□□□ -0.35
PABPC4-202ENST00000372857 FNDC10F2Z333 226 aa12.84□□□□□ -0.35
PABPC4-202ENST00000372857 FAM201AQ5SY85 155 aa12.84□□□□□ -0.35
PABPC4-202ENST00000372857 BLNKQ8WV28 456 aa12.84□□□□□ -0.35
PABPC4-202ENST00000372857 TEX50A0A1B0GTY4 177 aa12.83□□□□□ -0.35
PABPC4-202ENST00000372857 F2RL2O00254 374 aa12.83□□□□□ -0.35
PABPC4-202ENST00000372857 COX7A2P2O60397 106 aa12.83□□□□□ -0.35
PABPC4-202ENST00000372857 HBBP68871 147 aa12.83□□□□□ -0.35
PABPC4-202ENST00000372857 SPRNQ5BIV9 151 aa12.83□□□□□ -0.35
PABPC4-202ENST00000372857 C12orf54Q6X4T0 127 aa12.83□□□□□ -0.35
PABPC4-202ENST00000372857 LINC00322Q6ZN03 302 aaPredicted RBP12.83□□□□□ -0.35
PABPC4-202ENST00000372857 TMEM191AQ9H0A3 160 aa12.83□□□□□ -0.35
PABPC4-202ENST00000372857 PRNDQ9UKY0 176 aa12.83□□□□□ -0.35
PABPC4-202ENST00000372857 INTS1Q8N201 2190 aaKnown RBP12.83□□□□□ -0.36
PABPC4-202ENST00000372857 KLRC4-KLRK1H3BQV0 150 aa12.83□□□□□ -0.36
PABPC4-202ENST00000372857 CRXO43186 299 aaPredicted RBP12.83□□□□□ -0.36
PABPC4-202ENST00000372857 C19orf24Q9BVV8 132 aa12.83□□□□□ -0.36
PABPC4-202ENST00000372857 SCRT2Q9NQ03 307 aa12.83□□□□□ -0.36
PABPC4-202ENST00000372857 TPRP12270 2363 aaKnown RBP12.83□□□□□ -0.36
PABPC4-202ENST00000372857 ACACAQ13085 2346 aa12.83□□□□□ -0.36
PABPC4-202ENST00000372857 PKDREJQ9NTG1 2253 aa12.83□□□□□ -0.36
PABPC4-202ENST00000372857 SPAARA0A1B0GVQ0 90 aa12.83□□□□□ -0.36
PABPC4-202ENST00000372857 SAP30O75446 220 aa12.83□□□□□ -0.36
PABPC4-202ENST00000372857 RNASE2P10153 161 aaKnown RBP12.83□□□□□ -0.36
PABPC4-202ENST00000372857 RPS20P60866 119 aaKnown RBP12.83□□□□□ -0.36
PABPC4-202ENST00000372857 CD69Q07108 199 aa12.83□□□□□ -0.36
PABPC4-202ENST00000372857 RND1Q92730 232 aa12.83□□□□□ -0.36
PABPC4-202ENST00000372857 DSCAMO60469 2012 aa12.82□□□□□ -0.36
PABPC4-202ENST00000372857 PSMB11A5LHX3 300 aa12.82□□□□□ -0.36
PABPC4-202ENST00000372857 CSN3P07498 182 aa12.82□□□□□ -0.36
PABPC4-202ENST00000372857 DUX4L9Q6RFH8 374 aaPredicted RBP12.82□□□□□ -0.36
PABPC4-202ENST00000372857 MRPL32Q9BYC8 188 aaKnown RBP12.82□□□□□ -0.36
PABPC4-202ENST00000372857 PLCE1Q9P212 2302 aa12.82□□□□□ -0.36
PABPC4-202ENST00000372857 UPK2O00526 184 aa12.82□□□□□ -0.36
PABPC4-202ENST00000372857 C17orf58Q2M2W7 97 aa12.82□□□□□ -0.36
PABPC4-202ENST00000372857 SARAFQ96BY9 339 aa12.82□□□□□ -0.36
PABPC4-202ENST00000372857 C7orf69Q9H7B7 122 aa12.82□□□□□ -0.36
PABPC4-202ENST00000372857 KALRNO60229 2985 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms