RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 FAM90A1Q86YD7 464 aa19.83■□□□□ 0.77
RAPGEF1-203ENST00000372195 ST20Q9HBF5 79 aa19.83■□□□□ 0.77
RAPGEF1-203ENST00000372195 LDLRAD2Q5SZI1 272 aa19.83■□□□□ 0.77
RAPGEF1-203ENST00000372195 TRAV2A0A0B4J234 112 aa19.83■□□□□ 0.76
RAPGEF1-203ENST00000372195 FGF16O43320 207 aa19.83■□□□□ 0.76
RAPGEF1-203ENST00000372195 IGLV3-19P01714 112 aa19.83■□□□□ 0.76
RAPGEF1-203ENST00000372195 FAM89BQ8N5H3 189 aa19.83■□□□□ 0.76
RAPGEF1-203ENST00000372195 H3BRM9 83 aa19.83■□□□□ 0.76
RAPGEF1-203ENST00000372195 LOC285556D6RIA3 1793 aa19.82■□□□□ 0.76
RAPGEF1-203ENST00000372195 TRAV3A0A0B4J244 114 aa19.82■□□□□ 0.76
RAPGEF1-203ENST00000372195 CNTFRP26992 372 aa19.82■□□□□ 0.76
RAPGEF1-203ENST00000372195 LINC00205P59089 165 aa19.82■□□□□ 0.76
RAPGEF1-203ENST00000372195 MTURNQ8N3F0 131 aa19.82■□□□□ 0.76
RAPGEF1-203ENST00000372195 C11orf68Q9H3H3 251 aaKnown RBP19.82■□□□□ 0.76
RAPGEF1-203ENST00000372195 WNK3Q9BYP7 1800 aa19.82■□□□□ 0.76
RAPGEF1-203ENST00000372195 KLRD1Q13241 179 aa19.82■□□□□ 0.76
RAPGEF1-203ENST00000372195 MRPS18CQ9Y3D5 142 aaKnown RBP19.82■□□□□ 0.76
RAPGEF1-203ENST00000372195 RPL15P61313 204 aaKnown RBP19.82■□□□□ 0.76
RAPGEF1-203ENST00000372195 LSM4Q9Y4Z0 139 aaKnown RBP19.82■□□□□ 0.76
RAPGEF1-203ENST00000372195 TRAV9-1A0A075B6T8 112 aa19.81■□□□□ 0.76
RAPGEF1-203ENST00000372195 NPIPB5A8MRT5 1133 aa19.81■□□□□ 0.76
RAPGEF1-203ENST00000372195 METRNQ9UJH8 293 aa19.81■□□□□ 0.76
RAPGEF1-203ENST00000372195 IGHV1-46P01743 117 aa19.81■□□□□ 0.76
RAPGEF1-203ENST00000372195 EXOC3-AS1Q8N2X6 119 aa19.81■□□□□ 0.76
RAPGEF1-203ENST00000372195 C5orf30Q96GV9 206 aa19.81■□□□□ 0.76
RAPGEF1-203ENST00000372195 IGLV3-12A0A075B6K2 115 aa19.81■□□□□ 0.76
RAPGEF1-203ENST00000372195 IGHV3-73A0A0B4J1V6 119 aa19.81■□□□□ 0.76
RAPGEF1-203ENST00000372195 PAX1P15863 534 aa19.81■□□□□ 0.76
RAPGEF1-203ENST00000372195 ID3Q02535 119 aa19.81■□□□□ 0.76
RAPGEF1-203ENST00000372195 STHQ8IWL8 128 aa19.81■□□□□ 0.76
RAPGEF1-203ENST00000372195 HIST3H2BBQ8N257 126 aa19.81■□□□□ 0.76
RAPGEF1-203ENST00000372195 TET1Q8NFU7 2136 aa19.81■□□□□ 0.76
RAPGEF1-203ENST00000372195 TRAV9-2A0A087WT02 112 aa19.8■□□□□ 0.76
RAPGEF1-203ENST00000372195 VDAC2P45880 294 aaPredicted RBP19.8■□□□□ 0.76
RAPGEF1-203ENST00000372195 CABIN1Q9Y6J0 2220 aa19.8■□□□□ 0.76
RAPGEF1-203ENST00000372195 NCR2O95944 276 aa19.8■□□□□ 0.76
RAPGEF1-203ENST00000372195 OR4X2Q8NGF9 303 aa19.8■□□□□ 0.76
RAPGEF1-203ENST00000372195 CYTL1Q9NRR1 136 aa19.8■□□□□ 0.76
RAPGEF1-203ENST00000372195 PRCDQ00LT1 54 aa19.8■□□□□ 0.76
RAPGEF1-203ENST00000372195 ZNF585BQ52M93 769 aa19.8■□□□□ 0.76
RAPGEF1-203ENST00000372195 YAE1D1Q9NRH1 226 aa19.8■□□□□ 0.76
RAPGEF1-203ENST00000372195 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.79■□□□□ 0.76
RAPGEF1-203ENST00000372195 LILRA1O75019 489 aa19.79■□□□□ 0.76
RAPGEF1-203ENST00000372195 CEACAM1P13688 526 aa19.79■□□□□ 0.76
RAPGEF1-203ENST00000372195 LY6DQ14210 128 aa19.79■□□□□ 0.76
RAPGEF1-203ENST00000372195 VCX2Q9H322 139 aa19.79■□□□□ 0.76
RAPGEF1-203ENST00000372195 CHTOPQ9Y3Y2 248 aaKnown RBP19.79■□□□□ 0.76
RAPGEF1-203ENST00000372195 C3orf36Q3SXR2 165 aa19.79■□□□□ 0.76
RAPGEF1-203ENST00000372195 TREML4Q6UXN2 200 aa19.79■□□□□ 0.76
RAPGEF1-203ENST00000372195 COLCA2A8K830 154 aa19.79■□□□□ 0.76
RAPGEF1-203ENST00000372195 TMEM219Q86XT9 240 aa19.79■□□□□ 0.76
RAPGEF1-203ENST00000372195 TEX29Q8N6K0 151 aa19.79■□□□□ 0.76
RAPGEF1-203ENST00000372195 SUPT4H1P63272 117 aaKnown RBP19.79■□□□□ 0.76
RAPGEF1-203ENST00000372195 A0A1B0GW15 77 aa19.78■□□□□ 0.76
RAPGEF1-203ENST00000372195 TMEM42Q69YG0 159 aa19.78■□□□□ 0.76
RAPGEF1-203ENST00000372195 Q6AWC8 147 aa19.78■□□□□ 0.76
RAPGEF1-203ENST00000372195 BMPERQ8N8U9 685 aa19.78■□□□□ 0.76
RAPGEF1-203ENST00000372195 TMEM167AQ8TBQ9 72 aa19.78■□□□□ 0.76
RAPGEF1-203ENST00000372195 AMBPP02760 352 aa19.78■□□□□ 0.76
RAPGEF1-203ENST00000372195 CRYGSP22914 178 aa19.78■□□□□ 0.76
RAPGEF1-203ENST00000372195 TEX38Q6PEX7 206 aa19.78■□□□□ 0.76
RAPGEF1-203ENST00000372195 PAX2Q02962 417 aa19.78■□□□□ 0.76
RAPGEF1-203ENST00000372195 NPFFR1Q9GZQ6 430 aa19.78■□□□□ 0.76
RAPGEF1-203ENST00000372195 TPRP12270 2363 aaKnown RBP19.78■□□□□ 0.76
RAPGEF1-203ENST00000372195 MALP21145 153 aa19.78■□□□□ 0.76
RAPGEF1-203ENST00000372195 NABP1Q96AH0 204 aa19.78■□□□□ 0.76
RAPGEF1-203ENST00000372195 LOC102723996A0A087X1L8 192 aa19.77■□□□□ 0.76
RAPGEF1-203ENST00000372195 GGNQ86UU5 652 aa19.77■□□□□ 0.76
RAPGEF1-203ENST00000372195 HBDP02042 147 aa19.77■□□□□ 0.76
RAPGEF1-203ENST00000372195 SRSF1Q07955 248 aaKnown RBP eCLIP19.77■□□□□ 0.76
RAPGEF1-203ENST00000372195 HOXA3O43365 443 aaPredicted RBP19.77■□□□□ 0.76
RAPGEF1-203ENST00000372195 CFAP161Q6P656 301 aa19.77■□□□□ 0.76
RAPGEF1-203ENST00000372195 THBDP07204 575 aa19.77■□□□□ 0.75
RAPGEF1-203ENST00000372195 IGFL4Q6B9Z1 124 aa19.77■□□□□ 0.75
RAPGEF1-203ENST00000372195 SCRT1Q9BWW7 348 aa19.77■□□□□ 0.75
RAPGEF1-203ENST00000372195 OSTCQ9NRP0 149 aa19.77■□□□□ 0.75
RAPGEF1-203ENST00000372195 PVRIGQ6DKI7 326 aa19.76■□□□□ 0.75
RAPGEF1-203ENST00000372195 MGST2Q99735 147 aa19.76■□□□□ 0.75
RAPGEF1-203ENST00000372195 XIRP1Q702N8 1843 aaKnown RBP19.76■□□□□ 0.75
RAPGEF1-203ENST00000372195 DPM2O94777 84 aa19.76■□□□□ 0.75
RAPGEF1-203ENST00000372195 NSUN5P1Q3KNT7 163 aa19.76■□□□□ 0.75
RAPGEF1-203ENST00000372195 ASXL3Q9C0F0 2248 aa19.76■□□□□ 0.75
RAPGEF1-203ENST00000372195 GNB1LQ9BYB4 327 aa19.76■□□□□ 0.75
RAPGEF1-203ENST00000372195 TRAV40A0A0B4J280 105 aa19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 PMS2P5A8MQ11 134 aa19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 IGKCP01834 107 aa19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 ZNF883P0CG24 379 aa19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 IFI27P40305 119 aaPredicted RBP19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 C8orf46Q8TAG6 207 aa19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 PSPNO60542 156 aa19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 CD5P06127 495 aa19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 TMEM200BQ69YZ2 307 aa19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 CD177Q8N6Q3 437 aa19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 CD300EQ496F6 205 aaPredicted RBP19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 SEPSECSQ9HD40 501 aaKnown RBP19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 RALGAPA1Q6GYQ0 2036 aa19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 CLPSP04118 112 aa19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 GTSCR1Q86UQ5 136 aa19.75■□□□□ 0.75
RAPGEF1-203ENST00000372195 ABCA7Q8IZY2 2146 aa19.74■□□□□ 0.75
RAPGEF1-203ENST00000372195 ORAOV1Q8WV07 137 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms