RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 CTRB1P17538 263 aa13.74□□□□□ -0.21
UBE3D-203ENST00000369747 GATA2P23769 480 aaPredicted RBP13.74□□□□□ -0.21
UBE3D-203ENST00000369747 ATP5G3P48201 142 aa13.74□□□□□ -0.21
UBE3D-203ENST00000369747 SUB1P53999 127 aaKnown RBP eCLIP13.74□□□□□ -0.21
UBE3D-203ENST00000369747 TNXAQ16473 311 aa13.74□□□□□ -0.21
UBE3D-203ENST00000369747 TMEM241Q24JQ0 296 aa13.74□□□□□ -0.21
UBE3D-203ENST00000369747 FBLN7Q53RD9 439 aa13.74□□□□□ -0.21
UBE3D-203ENST00000369747 FAM120AOSQ5T036 256 aa13.74□□□□□ -0.21
UBE3D-203ENST00000369747 CTRB2Q6GPI1 263 aa13.74□□□□□ -0.21
UBE3D-203ENST00000369747 ZNF343Q6P1L6 599 aa13.74□□□□□ -0.21
UBE3D-203ENST00000369747 ZFP82Q8N141 532 aa13.74□□□□□ -0.21
UBE3D-203ENST00000369747 SLC35E1Q96K37 410 aa13.74□□□□□ -0.21
UBE3D-203ENST00000369747 CXorf65A6NEN9 183 aa13.73□□□□□ -0.21
UBE3D-203ENST00000369747 LY6G6DO95868 133 aa13.73□□□□□ -0.21
UBE3D-203ENST00000369747 CD99P14209 185 aa13.73□□□□□ -0.21
UBE3D-203ENST00000369747 RPL27AP46776 148 aaKnown RBP13.73□□□□□ -0.21
UBE3D-203ENST00000369747 ELOBQ15370 118 aa13.73□□□□□ -0.21
UBE3D-203ENST00000369747 CCDC144NLQ6NUI1 221 aa13.73□□□□□ -0.21
UBE3D-203ENST00000369747 ACY3Q96HD9 319 aa13.73□□□□□ -0.21
UBE3D-203ENST00000369747 METTL1Q9UBP6 276 aaKnown RBP13.73□□□□□ -0.21
UBE3D-203ENST00000369747 HIVEP2P31629 2446 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 OOSP1A8MZH6 123 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 GCHFRP30047 84 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 COMPP49747 757 aaPredicted RBP13.72□□□□□ -0.21
UBE3D-203ENST00000369747 FAM78BQ5VT40 261 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 CST9LP1Q5W188 147 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 MIR17HGQ75NE6 70 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 PPP1R27Q86WC6 154 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 C2CD4CQ8TF44 421 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 F8P00451 2351 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 MDFIC2A0A1B0GVS7 189 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 C1orf196B1AJZ1 125 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 PDE6DO43924 150 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 ACTL6BO94805 426 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 GNB1P62873 340 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 SSBP2P81877 361 aaPredicted RBP13.72□□□□□ -0.21
UBE3D-203ENST00000369747 PVRIGQ6DKI7 326 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 OR51G1Q8NGK1 321 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 Q8WTZ3 238 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 RNF5Q99942 180 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 FBXL15Q9H469 300 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 TMEM242Q9NWH2 141 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 FUT9Q9Y231 359 aa13.72□□□□□ -0.21
UBE3D-203ENST00000369747 NSD1Q96L73 2696 aaPredicted RBP13.71□□□□□ -0.21
UBE3D-203ENST00000369747 VENTXO95231 258 aa13.71□□□□□ -0.21
UBE3D-203ENST00000369747 AREGP15514 252 aa13.71□□□□□ -0.21
UBE3D-203ENST00000369747 RAB5BP61020 215 aa13.71□□□□□ -0.21
UBE3D-203ENST00000369747 RPL23P62829 140 aaKnown RBP13.71□□□□□ -0.21
UBE3D-203ENST00000369747 ADIRFQ15847 76 aa13.71□□□□□ -0.21
UBE3D-203ENST00000369747 ZNF114Q8NC26 417 aa13.71□□□□□ -0.21
UBE3D-203ENST00000369747 MRPL36Q9P0J6 103 aaKnown RBP13.71□□□□□ -0.21
UBE3D-203ENST00000369747 URGCP-MRPS24S4R325 110 aa13.71□□□□□ -0.21
UBE3D-203ENST00000369747 MFAP2P55001 183 aa13.7□□□□□ -0.22
UBE3D-203ENST00000369747 BPIFB3P59826 476 aa13.7□□□□□ -0.22
UBE3D-203ENST00000369747 KIAA0141Q14154 515 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-203ENST00000369747 Q71RC1 249 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-203ENST00000369747 TXNDC17Q9BRA2 123 aa13.7□□□□□ -0.22
UBE3D-203ENST00000369747 YTHDF2Q9Y5A9 579 aaKnown RBP13.7□□□□□ -0.22
UBE3D-203ENST00000369747 TEX22C9J3V5 150 aa13.7□□□□□ -0.22
UBE3D-203ENST00000369747 IGHV3-48P01763 117 aa13.7□□□□□ -0.22
UBE3D-203ENST00000369747 CXCL1P09341 107 aa13.7□□□□□ -0.22
UBE3D-203ENST00000369747 OR5G3P0C626 314 aa13.7□□□□□ -0.22
UBE3D-203ENST00000369747 DEFB112Q30KQ8 113 aa13.7□□□□□ -0.22
UBE3D-203ENST00000369747 C19orf35Q6ZS72 473 aa13.7□□□□□ -0.22
UBE3D-203ENST00000369747 MRPL41Q8IXM3 137 aaKnown RBP13.7□□□□□ -0.22
UBE3D-203ENST00000369747 NPIPB3Q92617 1050 aa13.7□□□□□ -0.22
UBE3D-203ENST00000369747 SSX3Q99909 188 aa13.7□□□□□ -0.22
UBE3D-203ENST00000369747 MEGF9Q9H1U4 602 aa13.7□□□□□ -0.22
UBE3D-203ENST00000369747 SAV1Q9H4B6 383 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-203ENST00000369747 IGKV1D-37A0A075B6S9 117 aa13.69□□□□□ -0.22
UBE3D-203ENST00000369747 PSMB11A5LHX3 300 aa13.69□□□□□ -0.22
UBE3D-203ENST00000369747 F6UZH7 168 aa13.69□□□□□ -0.22
UBE3D-203ENST00000369747 CLDN34H7C241 214 aa13.69□□□□□ -0.22
UBE3D-203ENST00000369747 FCN1O00602 326 aa13.69□□□□□ -0.22
UBE3D-203ENST00000369747 APELAP0DMC3 54 aa13.69□□□□□ -0.22
UBE3D-203ENST00000369747 RND2P52198 227 aa13.69□□□□□ -0.22
UBE3D-203ENST00000369747 HES1Q14469 280 aa13.69□□□□□ -0.22
UBE3D-203ENST00000369747 THAP8Q8NA92 274 aa13.69□□□□□ -0.22
UBE3D-203ENST00000369747 C19orf24Q9BVV8 132 aa13.69□□□□□ -0.22
UBE3D-203ENST00000369747 GSX1Q9H4S2 264 aaPredicted RBP13.69□□□□□ -0.22
UBE3D-203ENST00000369747 TGIF2-C20orf24A0A0A6YYL0 155 aa13.68□□□□□ -0.22
UBE3D-203ENST00000369747 CLN5O75503 358 aa13.68□□□□□ -0.22
UBE3D-203ENST00000369747 MT-CO2P00403 227 aa13.68□□□□□ -0.22
UBE3D-203ENST00000369747 PIFOQ8TCI5 191 aa13.68□□□□□ -0.22
UBE3D-203ENST00000369747 TMEM37Q8WXS4 190 aa13.68□□□□□ -0.22
UBE3D-203ENST00000369747 ZNF503Q96F45 646 aa13.68□□□□□ -0.22
UBE3D-203ENST00000369747 EAF1Q96JC9 268 aaPredicted RBP13.68□□□□□ -0.22
UBE3D-203ENST00000369747 CTDSP1Q9GZU7 261 aa13.68□□□□□ -0.22
UBE3D-203ENST00000369747 BIN3Q9NQY0 253 aa13.68□□□□□ -0.22
UBE3D-203ENST00000369747 NDUFB4O95168 129 aa13.68□□□□□ -0.22
UBE3D-203ENST00000369747 CRYGCP07315 174 aa13.68□□□□□ -0.22
UBE3D-203ENST00000369747 FOSL1P15407 271 aa13.68□□□□□ -0.22
UBE3D-203ENST00000369747 BRS3P32247 399 aa13.68□□□□□ -0.22
UBE3D-203ENST00000369747 C9orf139Q6ZV77 190 aa13.68□□□□□ -0.22
UBE3D-203ENST00000369747 DERL1Q9BUN8 251 aa13.68□□□□□ -0.22
UBE3D-203ENST00000369747 TECRQ9NZ01 308 aaKnown RBP13.68□□□□□ -0.22
UBE3D-203ENST00000369747 TCRBV4S1A1TA0A5B7 111 aa13.67□□□□□ -0.22
UBE3D-203ENST00000369747 ZNF90Q03938 601 aa13.67□□□□□ -0.22
UBE3D-203ENST00000369747 C1QL4Q86Z23 238 aa13.67□□□□□ -0.22
UBE3D-203ENST00000369747 OR1P1Q8NH06 330 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms