RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 NRN1Q9NPD7 142 aa15.06■□□□□ 0
SNX27-202ENST00000368841 TMEM155Q4W5P6 130 aa15.06■□□□□ 0
SNX27-202ENST00000368841 KLF17Q5JT82 389 aaPredicted RBP15.06■□□□□ 0
SNX27-202ENST00000368841 VWCEQ96DN2 955 aa15.06■□□□□ 0
SNX27-202ENST00000368841 CKS1BP61024 79 aa15.05■□□□□ 0
SNX27-202ENST00000368841 ZNF625Q96I27 306 aaPredicted RBP15.05■□□□□ 0
SNX27-202ENST00000368841 TRGV1A0A0A0MS02 117 aa15.05■□□□□ 0
SNX27-202ENST00000368841 SCRT1Q9BWW7 348 aa15.05■□□□□ 0
SNX27-202ENST00000368841 RFNGQ9Y644 331 aa15.05■□□□□ 0
SNX27-202ENST00000368841 WNT2P09544 360 aa15.05■□□□□ 0
SNX27-202ENST00000368841 TMEM249Q2WGJ8 235 aa15.05■□□□□ 0
SNX27-202ENST00000368841 NIT1Q86X76 327 aa15.05■□□□□ 0
SNX27-202ENST00000368841 CLDN16Q9Y5I7 305 aa15.05■□□□□ 0
SNX27-202ENST00000368841 PAQR4Q8N4S7 273 aaPredicted RBP15.05■□□□□ -0
SNX27-202ENST00000368841 THSD7AQ9UPZ6 1657 aa15.05■□□□□ -0
SNX27-202ENST00000368841 SRSF1Q07955 248 aaKnown RBP eCLIP15.05■□□□□ -0
SNX27-202ENST00000368841 TMEM8BA6NDV4 472 aa15.05■□□□□ -0
SNX27-202ENST00000368841 LINC00205P59089 165 aa15.05■□□□□ -0
SNX27-202ENST00000368841 TRAV8-4A0A0B4J246 113 aa15.04■□□□□ -0
SNX27-202ENST00000368841 CRIM1Q9NZV1 1036 aa15.04■□□□□ -0
SNX27-202ENST00000368841 SVILO95425 2214 aa15.04■□□□□ -0
SNX27-202ENST00000368841 UCP1P25874 307 aa15.04■□□□□ -0
SNX27-202ENST00000368841 ZNF319Q9P2F9 582 aa15.04■□□□□ -0
SNX27-202ENST00000368841 NYNRINQ9P2P1 1898 aaKnown RBP15.04■□□□□ -0
SNX27-202ENST00000368841 IGKV1D-8A0A087WSZ0 117 aa15.04■□□□□ -0
SNX27-202ENST00000368841 HOXA3O43365 443 aaPredicted RBP15.04■□□□□ -0
SNX27-202ENST00000368841 TMEM200BQ69YZ2 307 aa15.04■□□□□ -0
SNX27-202ENST00000368841 TRAV41A0A0B4J266 112 aa15.03■□□□□ -0
SNX27-202ENST00000368841 ASXL3Q9C0F0 2248 aa15.03■□□□□ -0
SNX27-202ENST00000368841 FCN3O75636 299 aa15.03■□□□□ -0
SNX27-202ENST00000368841 LCNL1Q6ZST4 164 aa15.03■□□□□ -0
SNX27-202ENST00000368841 CITED2Q99967 270 aaPredicted RBP15.03■□□□□ -0
SNX27-202ENST00000368841 A0A1B0GTI1 187 aa15.03■□□□□ -0
SNX27-202ENST00000368841 PMS2P5A8MQ11 134 aa15.03■□□□□ -0
SNX27-202ENST00000368841 TCRAP04437 139 aa15.03■□□□□ -0
SNX27-202ENST00000368841 SLC25A39Q9BZJ4 359 aaPredicted RBP15.03■□□□□ -0
SNX27-202ENST00000368841 Q8TAT8 98 aa15.03■□□□□ -0
SNX27-202ENST00000368841 RNF222A6NCQ9 220 aa15.03■□□□□ -0
SNX27-202ENST00000368841 C15orf32Q32M92 178 aa15.03■□□□□ -0
SNX27-202ENST00000368841 IGHV2-26A0A0B4J1V2 119 aa15.02■□□□□ -0
SNX27-202ENST00000368841 IGKCP01834 107 aa15.02■□□□□ -0
SNX27-202ENST00000368841 DPM2O94777 84 aa15.02■□□□□ -0
SNX27-202ENST00000368841 CCL20P78556 96 aa15.02■□□□□ -0
SNX27-202ENST00000368841 OR2K2Q8NGT1 345 aa15.02■□□□□ -0
SNX27-202ENST00000368841 LINC00477Q96M19 166 aa15.02■□□□□ -0
SNX27-202ENST00000368841 TRAV3A0A0B4J244 114 aa15.02■□□□□ -0
SNX27-202ENST00000368841 HIST1H4AP62805 103 aaKnown RBP15.02■□□□□ -0
SNX27-202ENST00000368841 TAF1LQ8IZX4 1826 aa15.02■□□□□ -0
SNX27-202ENST00000368841 SCN4AP35499 1836 aa15.02□□□□□ -0.01
SNX27-202ENST00000368841 GSN-AS1Q9NRJ2 163 aa15.02□□□□□ -0.01
SNX27-202ENST00000368841 IGKV1-9A0A0C4DH69 117 aa15.02□□□□□ -0.01
SNX27-202ENST00000368841 ZNF672Q499Z4 452 aaPredicted RBP15.02□□□□□ -0.01
SNX27-202ENST00000368841 OCC1Q8TAD7 63 aa15.02□□□□□ -0.01
SNX27-202ENST00000368841 SLC25A2Q9BXI2 301 aa15.02□□□□□ -0.01
SNX27-202ENST00000368841 EFNB3Q15768 340 aa15.01□□□□□ -0.01
SNX27-202ENST00000368841 TRBV6-7A0A0A0MS04 114 aa15.01□□□□□ -0.01
SNX27-202ENST00000368841 C19orf67A6NJJ6 358 aa15.01□□□□□ -0.01
SNX27-202ENST00000368841 RNF126Q9BV68 326 aa15.01□□□□□ -0.01
SNX27-202ENST00000368841 YPEL1O60688 119 aa15.01□□□□□ -0.01
SNX27-202ENST00000368841 CDK2AP2O75956 126 aa15.01□□□□□ -0.01
SNX27-202ENST00000368841 YPEL2Q96QA6 119 aa15.01□□□□□ -0.01
SNX27-202ENST00000368841 BRCA1P38398 1863 aaKnown RBP15.01□□□□□ -0.01
SNX27-202ENST00000368841 MCRIP2Q9BUT9 160 aaKnown RBP15.01□□□□□ -0.01
SNX27-202ENST00000368841 RALGAPA1Q6GYQ0 2036 aa15.01□□□□□ -0.01
SNX27-202ENST00000368841 MRPL14Q6P1L8 145 aaKnown RBP15□□□□□ -0.01
SNX27-202ENST00000368841 KLHL30-AS1Q8NEE0 82 aa15□□□□□ -0.01
SNX27-202ENST00000368841 CYSLTR1Q9Y271 337 aa15□□□□□ -0.01
SNX27-202ENST00000368841 NR2C2APQ86WQ0 139 aa15□□□□□ -0.01
SNX27-202ENST00000368841 INS-IGF2F8WCM5 200 aa15□□□□□ -0.01
SNX27-202ENST00000368841 INSP01308 110 aa15□□□□□ -0.01
SNX27-202ENST00000368841 RUSC1-AS1Q66K80 236 aa15□□□□□ -0.01
SNX27-202ENST00000368841 SMKR1H3BMG3 65 aa14.99□□□□□ -0.01
SNX27-202ENST00000368841 CCL1P22362 96 aa14.99□□□□□ -0.01
SNX27-202ENST00000368841 XIRP1Q702N8 1843 aaKnown RBP14.99□□□□□ -0.01
SNX27-202ENST00000368841 LILRA1O75019 489 aa14.99□□□□□ -0.01
SNX27-202ENST00000368841 IGFBP3P17936 291 aaPredicted RBP14.99□□□□□ -0.01
SNX27-202ENST00000368841 PVRIGQ6DKI7 326 aa14.99□□□□□ -0.01
SNX27-202ENST00000368841 H3BUX3 64 aa14.99□□□□□ -0.01
SNX27-202ENST00000368841 ZNF48Q96MX3 618 aaPredicted RBP14.99□□□□□ -0.01
SNX27-202ENST00000368841 PRADC1Q9BSG0 188 aa14.99□□□□□ -0.01
SNX27-202ENST00000368841 MBNL3Q9NUK0 354 aaKnown RBP14.99□□□□□ -0.01
SNX27-202ENST00000368841 LRRC37AA6NMS7 1700 aa14.99□□□□□ -0.01
SNX27-202ENST00000368841 DOCK3Q8IZD9 2030 aa14.99□□□□□ -0.01
SNX27-202ENST00000368841 TRGV11A0A075B6L2 103 aa14.99□□□□□ -0.01
SNX27-202ENST00000368841 A0A087WWL8 130 aa14.99□□□□□ -0.01
SNX27-202ENST00000368841 PRTN3P24158 256 aa14.99□□□□□ -0.01
SNX27-202ENST00000368841 DUSP14O95147 198 aaKnown RBP14.98□□□□□ -0.01
SNX27-202ENST00000368841 ERCC8Q13216 396 aa14.98□□□□□ -0.01
SNX27-202ENST00000368841 TMEM144Q7Z5S9 345 aa14.98□□□□□ -0.01
SNX27-202ENST00000368841 SLC50A1Q9BRV3 221 aa14.98□□□□□ -0.01
SNX27-202ENST00000368841 PAX4O43316 350 aa14.98□□□□□ -0.01
SNX27-202ENST00000368841 NAPSAO96009 420 aa14.98□□□□□ -0.01
SNX27-202ENST00000368841 HGFACQ04756 655 aa14.98□□□□□ -0.01
SNX27-202ENST00000368841 SAMD13Q5VXD3 122 aa14.98□□□□□ -0.01
SNX27-202ENST00000368841 ZNF362Q5T0B9 420 aaPredicted RBP14.98□□□□□ -0.01
SNX27-202ENST00000368841 CACNG8Q8WXS5 425 aa14.98□□□□□ -0.01
SNX27-202ENST00000368841 A0A087WX48 190 aa14.98□□□□□ -0.01
SNX27-202ENST00000368841 D6R8Y8 96 aa14.98□□□□□ -0.01
SNX27-202ENST00000368841 NRXN2Q9P2S2 1712 aa14.98□□□□□ -0.01
SNX27-202ENST00000368841 M0R2P5 195 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms