RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 IL9P15248 144 aa7.47□□□□□ -1.21
SYNE1-209ENST00000367257 HTN1P15515 57 aa7.47□□□□□ -1.21
SYNE1-209ENST00000367257 PRSS12P56730 875 aa7.47□□□□□ -1.21
SYNE1-209ENST00000367257 HERV-K104P63124 156 aa7.47□□□□□ -1.21
SYNE1-209ENST00000367257 PRCDQ00LT1 54 aa7.47□□□□□ -1.21
SYNE1-209ENST00000367257 STPG1Q5TH74 334 aa7.47□□□□□ -1.21
SYNE1-209ENST00000367257 Q9H3A6 140 aa7.47□□□□□ -1.21
SYNE1-209ENST00000367257 C16orf54Q6UWD8 224 aa7.47□□□□□ -1.21
SYNE1-209ENST00000367257 FOXC2Q99958 501 aa7.47□□□□□ -1.21
SYNE1-209ENST00000367257 MIA3Q5JRA6 1907 aa7.47□□□□□ -1.21
SYNE1-209ENST00000367257 FOXI3A8MTJ6 420 aaPredicted RBP7.47□□□□□ -1.21
SYNE1-209ENST00000367257 GCSAMLQ5JQS6 135 aa7.47□□□□□ -1.21
SYNE1-209ENST00000367257 PPP1R27Q86WC6 154 aa7.47□□□□□ -1.21
SYNE1-209ENST00000367257 EAF1Q96JC9 268 aaPredicted RBP7.47□□□□□ -1.21
SYNE1-209ENST00000367257 EPDR1Q9UM22 224 aa7.47□□□□□ -1.21
SYNE1-209ENST00000367257 LOC102723996A0A087X1L8 192 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 TRBV6-6A0A0A6YYG2 114 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 FCN3O75636 299 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 PRTN3P24158 256 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 MORN3Q6PF18 240 aaPredicted RBP7.46□□□□□ -1.21
SYNE1-209ENST00000367257 ZNF826PQ6ZT77 177 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 DTX2Q86UW9 622 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 VKORC1L1Q8N0U8 176 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 RNF182Q8N6D2 247 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 TPRX1Q8N7U7 411 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 STPG4Q8N801 248 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 PRR7Q8TB68 274 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 SRSF8Q9BRL6 282 aaKnown RBP7.46□□□□□ -1.21
SYNE1-209ENST00000367257 MRPL27Q9P0M9 148 aaKnown RBP7.46□□□□□ -1.21
SYNE1-209ENST00000367257 SPTBN1Q01082 2364 aaKnown RBP7.46□□□□□ -1.21
SYNE1-209ENST00000367257 COL4A6Q14031 1691 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 A0A087X0K7 114 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 IGHV3-21A0A0B4J1V1 117 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 PSMB11A5LHX3 300 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 CGAP01215 116 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 IGLC2P0DOY2 106 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 IGLC3P0DOY3 106 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 LHX2P50458 406 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 ZNF415Q09FC8 603 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 PMVKQ15126 192 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 PPP1R32Q7Z5V6 425 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 LYPD1Q8N2G4 141 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 FBXL7Q9UJT9 491 aa7.46□□□□□ -1.21
SYNE1-209ENST00000367257 CHD7Q9P2D1 2997 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 C9orf118A6NHY6 69 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 MMP23AO75900 390 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 TRGV3P03979 118 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 C3orf79P0CE67 100 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 IGFBP2P18065 325 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 ZNF497Q6ZNH5 498 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 JMJD8Q96S16 334 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 DOCK3Q8IZD9 2030 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 SCO2A0A1W2PP80 73 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 J3QRE1 110 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 C1QCP02747 245 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 FOXA3P55318 350 aaPredicted RBP7.46□□□□□ -1.22
SYNE1-209ENST00000367257 PLAURQ03405 335 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 Q6ZS49 121 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 SLC25A45Q8N413 288 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 PLEKHB2Q96CS7 222 aa7.46□□□□□ -1.22
SYNE1-209ENST00000367257 SSBP3Q9BWW4 388 aaPredicted RBP7.46□□□□□ -1.22
SYNE1-209ENST00000367257 PLAUP00749 431 aa7.45□□□□□ -1.22
SYNE1-209ENST00000367257 TGFAP01135 160 aa7.45□□□□□ -1.22
SYNE1-209ENST00000367257 C1QTNF9P0C862 333 aa7.45□□□□□ -1.22
SYNE1-209ENST00000367257 ATXN8Q156A1 80 aa7.45□□□□□ -1.22
SYNE1-209ENST00000367257 DLX4Q92988 240 aaPredicted RBP7.45□□□□□ -1.22
SYNE1-209ENST00000367257 CYTL1Q9NRR1 136 aa7.45□□□□□ -1.22
SYNE1-209ENST00000367257 LTBP2Q14767 1821 aa7.45□□□□□ -1.22
SYNE1-209ENST00000367257 F8W1H4 67 aa7.45□□□□□ -1.22
SYNE1-209ENST00000367257 NBR2O15453 112 aa7.45□□□□□ -1.22
SYNE1-209ENST00000367257 CD69Q07108 199 aa7.45□□□□□ -1.22
SYNE1-209ENST00000367257 USP34Q70CQ2 3546 aa7.45□□□□□ -1.22
SYNE1-209ENST00000367257 CACNA1CQ13936 2221 aa7.45□□□□□ -1.22
SYNE1-209ENST00000367257 HIGD1CA8MV81 97 aa7.45□□□□□ -1.22
SYNE1-209ENST00000367257 NEUROG3Q9Y4Z2 214 aa7.45□□□□□ -1.22
SYNE1-209ENST00000367257 RALGAPA2Q2PPJ7 1873 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 IGKV3-7A0A075B6H7 116 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 C9orf172C9J069 976 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 C4orf51C9J302 202 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 EGR1P18146 543 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 DSCR9P59020 149 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 CFHR1Q03591 330 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 C5orf47Q569G3 176 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 CDPF1Q6NVV7 123 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 FOXA2Q9Y261 457 aaPredicted RBP7.44□□□□□ -1.22
SYNE1-209ENST00000367257 NCOR1O75376 2440 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 IGKCP01834 107 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 TMEM155Q4W5P6 130 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 TRAV2A0A0B4J234 112 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 KIR2DL5BA0A0G2JN68 375 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 KIR2DL5BA0A0G2JPC4 375 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 C17orf98A8MV24 154 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 TFF3Q07654 80 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 KIR2DL5AQ8N109 375 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 C8orf46Q8TAG6 207 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 SLC25A39Q9BZJ4 359 aaPredicted RBP7.44□□□□□ -1.22
SYNE1-209ENST00000367257 TANC1Q9C0D5 1861 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 MLNRO43193 412 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 TNFRSF6BO95407 300 aa7.44□□□□□ -1.22
SYNE1-209ENST00000367257 ZNF585BQ52M93 769 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms