RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 TMEM272A0A1B0GTI8 110 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 A0A1B0GU03 582 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 PTGES3LE9PB15 166 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 SLC17A2O00624 439 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 CLN5O75503 358 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 HRASP01112 189 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 S100PP25815 95 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 DEFB1P60022 68 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 C2orf76Q3KRA6 126 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 HSD17B12Q53GQ0 312 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 Q6ZS49 121 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 STXBP6Q8NFX7 210 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 OR56B1Q8NGI3 324 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 OR4D10Q8NGI6 311 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 RAB3CQ96E17 227 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 GRAMD2BQ96HH9 432 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 NEU1Q99519 415 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 COMMD5Q9GZQ3 224 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 NDUFA4L2Q9NRX3 87 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 TMEM140Q9NV12 185 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 MED9Q9NWA0 146 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 TPRKBQ9Y3C4 175 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 AK6Q9Y3D8 172 aaKnown RBP5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 RNF213Q63HN8 5207 aa5.91□□□□□ -1.46
HMGB1P39-201ENST00000366304 SULT1C2O00338 296 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 MYL12BO14950 172 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 IFNA7P01567 189 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 C1QBP02746 253 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 S100A9P06702 114 aaKnown RBP5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 UCHL1P09936 223 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 CD36P16671 472 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 MAPK3P27361 379 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 ETV6P41212 452 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 WNT4P56705 351 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 FXYD7P58549 80 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 TSPAN5P62079 268 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 POU2AF1Q16633 256 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 TOR2AQ5JU69 321 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 TMEM91Q6ZNR0 172 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 Q6ZRN7 208 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 SPAG16Q8N0X2 631 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 DEDD2Q8WXF8 326 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 SLC25A46Q96AG3 418 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 FAM3DQ96BQ1 224 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 ZNF503Q96F45 646 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 ST6GAL2Q96JF0 529 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 HYLS1Q96M11 299 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 C17orf77Q96MU5 243 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 ATG101Q9BSB4 218 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 MND1Q9BWT6 205 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 DCSTAMPQ9H295 470 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 DUSP21Q9H596 190 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 CCL28Q9NRJ3 127 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 NSG2Q9Y328 171 aa5.9□□□□□ -1.46
HMGB1P39-201ENST00000366304 IGHV3OR16-12A0A075B7B8 117 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 H3BMM0 161 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 CTDSP2O14595 271 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 RGS10O43665 173 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 SLC22A5O76082 557 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 GABARAPO95166 117 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 PRM2P04554 102 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 S100A8P05109 93 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 PTHLHP12272 177 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 HIST1H1DP16402 221 aaKnown RBP5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 IFITM3Q01628 133 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 RAB11BQ15907 218 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 PSMG4Q5JS54 123 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 CLLU1Q5K131 121 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 GDF5OSQ5U4N7 250 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 NANOGP1Q8N7R0 232 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 OR10R2Q8NGX6 335 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 TCEAL7Q9BRU2 100 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 HINT2Q9BX68 163 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 BIN3Q9NQY0 253 aa5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 YTHDF2Q9Y5A9 579 aaKnown RBP5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 PUS1Q9Y606 427 aaKnown RBP eCLIP5.89□□□□□ -1.47
HMGB1P39-201ENST00000366304 KRTAP29-1A8MX34 341 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 MT-CO2P00403 227 aa5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 CD5P06127 495 aa5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 RAB4AP20338 218 aa5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 MEOX2P50222 304 aa5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 NKX2-5P52952 324 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 MFAP4P55083 255 aa5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 TAS2R31P59538 309 aa5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 SPHARQ15513 63 aa5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 LBHQ53QV2 105 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 GSG1LQ6UXU4 331 aa5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 EIF4E3Q8N5X7 224 aaKnown RBP5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 LSM10Q969L4 123 aaKnown RBP5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 C12orf57Q99622 126 aa5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 FUNDC2Q9BWH2 189 aa5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 CCDC90BQ9GZT6 254 aa5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 Q9H8V8 135 aa5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 MRPL36Q9P0J6 103 aaKnown RBP5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 LSM2Q9Y333 95 aaKnown RBP5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 RFNGQ9Y644 331 aa5.88□□□□□ -1.47
HMGB1P39-201ENST00000366304 RPS10-NUDT3A0A1W2PQS6 291 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 TMEM189A5PLL7 270 aa5.87□□□□□ -1.47
HMGB1P39-201ENST00000366304 RGS5O15539 181 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms