RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 CHTOPQ9Y3Y2 248 aaKnown RBP6.69□□□□□ -1.34
CTNND1-204ENST00000361796 LINC00205P59089 165 aa6.69□□□□□ -1.34
CTNND1-204ENST00000361796 NDPQ00604 133 aa6.69□□□□□ -1.34
CTNND1-204ENST00000361796 TMEM133Q9H2Q1 129 aa6.69□□□□□ -1.34
CTNND1-204ENST00000361796 RBMY1BA6NDE4 496 aaKnown RBP6.68□□□□□ -1.34
CTNND1-204ENST00000361796 RBMY1EA6NEQ0 496 aaKnown RBP6.68□□□□□ -1.34
CTNND1-204ENST00000361796 RBMY1DP0C7P1 496 aaKnown RBP6.68□□□□□ -1.34
CTNND1-204ENST00000361796 RBMY1A1P0DJD3 496 aaKnown RBP6.68□□□□□ -1.34
CTNND1-204ENST00000361796 RBMY1CP0DJD4 496 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 PSMG4Q5JS54 123 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 MRPL14Q6P1L8 145 aaKnown RBP6.68□□□□□ -1.34
CTNND1-204ENST00000361796 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-204ENST00000361796 E9PQ18 207 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 LYPD3O95274 346 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 CD300EQ496F6 205 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-204ENST00000361796 PEMTQ9UBM1 199 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 PSG8Q9UQ74 426 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 LRRC37AA6NMS7 1700 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 C5orf63A6NC05 138 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 IGHV3-53P01767 116 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 CXCL1P09341 107 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 RNF144BQ7Z419 303 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 TMEM170AQ8WVE7 144 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 KLHDC3Q9BQ90 382 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 ZNF581Q9P0T4 197 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 LAMTOR2Q9Y2Q5 125 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 A0A087WWC5 75 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 TRAV3A0A0B4J244 114 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 FABP5P3A8MUU1 101 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 THBDP07204 575 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 PAX1P15863 534 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 BMPERQ8N8U9 685 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 OR9G4Q8NGQ1 327 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 IGKV1-12A0A0C4DH73 117 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 IGKV1D-12P01611 117 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 TIMP3P35625 211 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 IFI27P40305 119 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-204ENST00000361796 NXT2Q9NPJ8 142 aaKnown RBP6.68□□□□□ -1.34
CTNND1-204ENST00000361796 NEUROG3Q9Y4Z2 214 aa6.68□□□□□ -1.34
CTNND1-204ENST00000361796 TRGV4A0A0C4DH28 118 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 VMO1Q7Z5L0 202 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 TMEM144Q7Z5S9 345 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 FLVCR1-AS1Q8TAF5 88 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 SCRT1Q9BWW7 348 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 YPEL1O60688 119 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 HIST1H2BKO60814 126 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 IGHV1-46P01743 117 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 HIST1H2BJP06899 126 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 CEACAM1P13688 526 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 HIST1H2BOP23527 126 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 HIST1H2BBP33778 126 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 HIST1H2BDP58876 126 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 HIST1H2BCP62807 126 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 HIST2H2BEQ16778 126 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-204ENST00000361796 HIST1H2BHQ93079 126 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 YPEL2Q96QA6 119 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 HIST1H2BNQ99877 126 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 HIST1H2BMQ99879 126 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 PRDM13Q9H4Q3 707 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 BRCA1P38398 1863 aaKnown RBP6.67□□□□□ -1.34
CTNND1-204ENST00000361796 ZNF474Q6S9Z5 364 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-204ENST00000361796 IGKV1-27A0A075B6S5 117 aa6.67□□□□□ -1.34
CTNND1-204ENST00000361796 MCRIP2Q9BUT9 160 aaKnown RBP6.67□□□□□ -1.34
CTNND1-204ENST00000361796 RPUSD1Q9UJJ7 312 aaKnown RBP6.67□□□□□ -1.34
CTNND1-204ENST00000361796 ZNF688P0C7X2 276 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 CEACAM8P31997 349 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-204ENST00000361796 SRSF6Q13247 344 aaKnown RBP6.66□□□□□ -1.34
CTNND1-204ENST00000361796 SIGLEC15Q6ZMC9 328 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 CACNG8Q8WXS5 425 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 BRWD3Q6RI45 1802 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 DPM2O94777 84 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 IGKCP01834 107 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 HBDP02042 147 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 DUTP33316 252 aaKnown RBP6.66□□□□□ -1.34
CTNND1-204ENST00000361796 SRSF1Q07955 248 aaKnown RBP eCLIP6.66□□□□□ -1.341e-7■□□□□ 10.7
CTNND1-204ENST00000361796 KLF17Q5JT82 389 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-204ENST00000361796 SAMD13Q5VXD3 122 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 BRD3OSQ6XYD6 125 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 PMS2P5A8MQ11 134 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 F8VVB4 439 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 F8VWA3 439 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 C1orf122Q6ZSJ8 110 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 LOC102723996A0A087X1L8 192 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 TCRAP04437 139 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 RPL35AP18077 110 aaKnown RBP6.66□□□□□ -1.34
CTNND1-204ENST00000361796 FOXD3Q9UJU5 478 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-204ENST00000361796 ATP5IP56385 69 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-204ENST00000361796 FAM166AQ6J272 317 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 Q8TAT8 98 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 ZMAT4Q9H898 229 aa6.66□□□□□ -1.34
CTNND1-204ENST00000361796 EFNA2O43921 213 aa6.65□□□□□ -1.34
CTNND1-204ENST00000361796 RNASE6Q93091 150 aaKnown RBP6.65□□□□□ -1.34
CTNND1-204ENST00000361796 J3QRE1 110 aa6.65□□□□□ -1.34
CTNND1-204ENST00000361796 PAX8Q06710 450 aa6.65□□□□□ -1.34
CTNND1-204ENST00000361796 TMEM200BQ69YZ2 307 aa6.65□□□□□ -1.34
CTNND1-204ENST00000361796 LCNL1Q6ZST4 164 aa6.65□□□□□ -1.34
CTNND1-204ENST00000361796 CHCHD5Q9BSY4 110 aa6.65□□□□□ -1.34
CTNND1-204ENST00000361796 CKS1BP61024 79 aa6.65□□□□□ -1.34
CTNND1-204ENST00000361796 PRCDQ00LT1 54 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms