RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 FOXA3P55318 350 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-203ENST00000361654 SRSF1Q07955 248 aaKnown RBP eCLIP9.08□□□□□ -0.96
CLIP1-203ENST00000361654 ORMDL2Q53FV1 153 aa9.08□□□□□ -0.96
CLIP1-203ENST00000361654 FAM223AQ8IWN6 122 aa9.08□□□□□ -0.96
CLIP1-203ENST00000361654 RCC1LQ96I51 464 aaKnown RBP9.08□□□□□ -0.96
CLIP1-203ENST00000361654 ZMAT4Q9H898 229 aa9.08□□□□□ -0.96
CLIP1-203ENST00000361654 MUC21A0A0G2JKD1 596 aa9.08□□□□□ -0.96
CLIP1-203ENST00000361654 MUC21A0A140T8X8 626 aa9.08□□□□□ -0.96
CLIP1-203ENST00000361654 C9orf139Q6ZV77 190 aa9.08□□□□□ -0.96
CLIP1-203ENST00000361654 MIR17HGQ75NE6 70 aa9.08□□□□□ -0.96
CLIP1-203ENST00000361654 BPESC1Q9GZL8 116 aa9.08□□□□□ -0.96
CLIP1-203ENST00000361654 F2Z2F3 143 aa9.08□□□□□ -0.96
CLIP1-203ENST00000361654 DMRT1Q9Y5R6 373 aa9.08□□□□□ -0.96
CLIP1-203ENST00000361654 ZNF324BQ6AW86 544 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-203ENST00000361654 MBNL3Q9NUK0 354 aaKnown RBP9.07□□□□□ -0.96
CLIP1-203ENST00000361654 IL36BQ9NZH7 164 aa9.07□□□□□ -0.96
CLIP1-203ENST00000361654 CRYGSP22914 178 aa9.07□□□□□ -0.96
CLIP1-203ENST00000361654 TFF3Q07654 80 aa9.07□□□□□ -0.96
CLIP1-203ENST00000361654 PSG8Q9UQ74 426 aa9.07□□□□□ -0.96
CLIP1-203ENST00000361654 IGHV1-3A0A0C4DH29 117 aa9.07□□□□□ -0.96
CLIP1-203ENST00000361654 AMBPP02760 352 aa9.07□□□□□ -0.96
CLIP1-203ENST00000361654 LINC00158P58513 81 aa9.07□□□□□ -0.96
CLIP1-203ENST00000361654 SEC11AP67812 179 aa9.07□□□□□ -0.96
CLIP1-203ENST00000361654 ACTL10Q5JWF8 245 aa9.07□□□□□ -0.96
CLIP1-203ENST00000361654 C10orf126Q8N4M7 172 aa9.07□□□□□ -0.96
CLIP1-203ENST00000361654 ABCA7Q8IZY2 2146 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 A6NNC1 897 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 J3QLI3 93 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 TCF21O43680 179 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 PLNP26678 52 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 ZNF506Q5JVG8 444 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 TMEM200BQ69YZ2 307 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 MDS2Q8NDY4 140 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 MIA3Q5JRA6 1907 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 TRAV9-1A0A075B6T8 112 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 GATA2P23769 480 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-203ENST00000361654 KLRD1Q13241 179 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 C5orf64Q2M2E5 130 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 OR5A1Q8NGJ0 315 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 LINC00114Q6XXX2 140 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 WDR90Q96KV7 1748 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 PEF1Q9UBV8 284 aaKnown RBP9.06□□□□□ -0.96
CLIP1-203ENST00000361654 A0A1B0GTI1 187 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 BTCP35070 178 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 EPDR1Q9UM22 224 aa9.06□□□□□ -0.96
CLIP1-203ENST00000361654 TRAV9-2A0A087WT02 112 aa9.05□□□□□ -0.96
CLIP1-203ENST00000361654 RMI2Q96E14 147 aa9.05□□□□□ -0.96
CLIP1-203ENST00000361654 IGHG3P01860 377 aa9.05□□□□□ -0.96
CLIP1-203ENST00000361654 DDTP30046 118 aa9.05□□□□□ -0.96
CLIP1-203ENST00000361654 DUTP33316 252 aaKnown RBP9.05□□□□□ -0.96
CLIP1-203ENST00000361654 ZNF525Q8N782 197 aa9.05□□□□□ -0.96
CLIP1-203ENST00000361654 RIF1Q5UIP0 2472 aaKnown RBP9.05□□□□□ -0.96
CLIP1-203ENST00000361654 APOC4P55056 127 aa9.05□□□□□ -0.96
CLIP1-203ENST00000361654 EFNB1P98172 346 aa9.05□□□□□ -0.96
CLIP1-203ENST00000361654 FAM89BQ8N5H3 189 aa9.05□□□□□ -0.96
CLIP1-203ENST00000361654 Q0VFX4 171 aa9.05□□□□□ -0.96
CLIP1-203ENST00000361654 CR1LQ2VPA4 569 aa9.05□□□□□ -0.96
CLIP1-203ENST00000361654 SPTBN1Q01082 2364 aaKnown RBP9.04□□□□□ -0.96
CLIP1-203ENST00000361654 SCN10AQ9Y5Y9 1956 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 A0A1W2PRE2 83 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 IZUMO1RA6ND01 250 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 FAM110DQ8TAY7 271 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-203ENST00000361654 LINC00477Q96M19 166 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 GATA4P43694 442 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 A0A1B0GWJ7 208 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 SCO2A0A1W2PP80 73 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 NDUFA3O95167 84 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 NAPSAO96009 420 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 TYMSP04818 313 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 DAD1P61803 113 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 ZNF329Q86UD4 541 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 MLNRO43193 412 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 FAM169BQ8N8A8 192 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 WFDC12Q8WWY7 111 aa9.04□□□□□ -0.96
CLIP1-203ENST00000361654 C11orf68Q9H3H3 251 aaKnown RBP9.04□□□□□ -0.96
CLIP1-203ENST00000361654 CCL1P22362 96 aa9.03□□□□□ -0.96
CLIP1-203ENST00000361654 CBLN1P23435 193 aa9.03□□□□□ -0.96
CLIP1-203ENST00000361654 PRTN3P24158 256 aa9.03□□□□□ -0.96
CLIP1-203ENST00000361654 C17orf82Q86X59 251 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-203ENST00000361654 GGTLC3B5MD39 225 aa9.03□□□□□ -0.96
CLIP1-203ENST00000361654 UBE2E2Q96LR5 201 aa9.03□□□□□ -0.96
CLIP1-203ENST00000361654 MYO16Q9Y6X6 1858 aa9.03□□□□□ -0.96
CLIP1-203ENST00000361654 SS18Q15532 418 aa9.03□□□□□ -0.96
CLIP1-203ENST00000361654 GGNQ86UU5 652 aa9.03□□□□□ -0.96
CLIP1-203ENST00000361654 HEATR5BQ9P2D3 2071 aa9.03□□□□□ -0.96
CLIP1-203ENST00000361654 C1QTNF9P0C862 333 aa9.03□□□□□ -0.96
CLIP1-203ENST00000361654 CGB3P0DN86 165 aa9.03□□□□□ -0.96
CLIP1-203ENST00000361654 DEFB130BP0DP73 79 aa9.03□□□□□ -0.96
CLIP1-203ENST00000361654 DEFB130AP0DP74 79 aa9.03□□□□□ -0.96
CLIP1-203ENST00000361654 OR2K2Q8NGT1 345 aa9.03□□□□□ -0.96
CLIP1-203ENST00000361654 MDC1Q14676 2089 aaKnown RBP9.03□□□□□ -0.96
CLIP1-203ENST00000361654 LINC01619G3V211 115 aa9.02□□□□□ -0.96
CLIP1-203ENST00000361654 RIPPLY3P57055 190 aa9.02□□□□□ -0.96
CLIP1-203ENST00000361654 DAZ1Q9NQZ3 744 aaKnown RBP9.02□□□□□ -0.96
CLIP1-203ENST00000361654 SRRM4A7MD48 611 aaKnown RBP9.02□□□□□ -0.97
CLIP1-203ENST00000361654 GZMBP10144 247 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 PSG1P11464 419 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 SAA4P35542 130 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 PCP4P48539 62 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 RASL10AQ92737 203 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms