RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 CKS2P33552 79 aa11.32□□□□□ -0.6
CTR9-201ENST00000361367 PAX8Q06710 450 aa11.32□□□□□ -0.6
CTR9-201ENST00000361367 TREML4Q6UXN2 200 aa11.32□□□□□ -0.6
CTR9-201ENST00000361367 UBE2E1P51965 193 aa11.31□□□□□ -0.6
CTR9-201ENST00000361367 Q9H3A6 140 aa11.31□□□□□ -0.6
CTR9-201ENST00000361367 HLA-DQA1P01909 254 aa11.31□□□□□ -0.6
CTR9-201ENST00000361367 BEND2Q8NDZ0 799 aa11.31□□□□□ -0.6
CTR9-201ENST00000361367 SCO2A0A1W2PP80 73 aa11.31□□□□□ -0.6
CTR9-201ENST00000361367 MEOX2P50222 304 aa11.31□□□□□ -0.6
CTR9-201ENST00000361367 Q6ZN92 141 aa11.31□□□□□ -0.6
CTR9-201ENST00000361367 Q96MF0 132 aa11.31□□□□□ -0.6
CTR9-201ENST00000361367 NCOR1P1Q9H4R4 102 aa11.31□□□□□ -0.6
CTR9-201ENST00000361367 TUBA4BQ9H853 241 aa11.31□□□□□ -0.6
CTR9-201ENST00000361367 LOC389332A0A1B0GUA5 103 aa11.31□□□□□ -0.6
CTR9-201ENST00000361367 TCAPO15273 167 aa11.31□□□□□ -0.6
CTR9-201ENST00000361367 SFRP2Q96HF1 295 aa11.31□□□□□ -0.6
CTR9-201ENST00000361367 WFDC1Q9HC57 220 aa11.31□□□□□ -0.6
CTR9-201ENST00000361367 VENTXO95231 258 aa11.3□□□□□ -0.6
CTR9-201ENST00000361367 ELOBQ15370 118 aa11.3□□□□□ -0.6
CTR9-201ENST00000361367 GCSAMLQ5JQS6 135 aa11.3□□□□□ -0.6
CTR9-201ENST00000361367 NDUFS7O75251 213 aa11.3□□□□□ -0.6
CTR9-201ENST00000361367 WISP2O76076 250 aa11.3□□□□□ -0.6
CTR9-201ENST00000361367 LHFPL4Q7Z7J7 247 aa11.3□□□□□ -0.6
CTR9-201ENST00000361367 CCDC168Q8NDH2 2452 aa11.3□□□□□ -0.6
CTR9-201ENST00000361367 PYYP10082 97 aa11.3□□□□□ -0.6
CTR9-201ENST00000361367 RUSC1-AS1Q66K80 236 aa11.3□□□□□ -0.6
CTR9-201ENST00000361367 DMRTC2Q8IXT2 367 aaPredicted RBP11.3□□□□□ -0.6
CTR9-201ENST00000361367 EIF4E3Q8N5X7 224 aaKnown RBP11.3□□□□□ -0.6
CTR9-201ENST00000361367 GPR82Q96P67 336 aa11.3□□□□□ -0.6
CTR9-201ENST00000361367 A0A0G2JRQ6 117 aa11.3□□□□□ -0.6
CTR9-201ENST00000361367 SRP19P09132 144 aaKnown RBP11.3□□□□□ -0.6
CTR9-201ENST00000361367 SAMD13Q5VXD3 122 aa11.3□□□□□ -0.6
CTR9-201ENST00000361367 CEP295Q9C0D2 2601 aa11.29□□□□□ -0.6
CTR9-201ENST00000361367 PTTG1IPP53801 180 aa11.29□□□□□ -0.6
CTR9-201ENST00000361367 ZNF585BQ52M93 769 aa11.29□□□□□ -0.6
CTR9-201ENST00000361367 TMEM14EPQ6UXP3 125 aa11.29□□□□□ -0.6
CTR9-201ENST00000361367 SEM1Q6ZVN7 128 aa11.29□□□□□ -0.6
CTR9-201ENST00000361367 GGTLC1Q9BX51 225 aa11.29□□□□□ -0.6
CTR9-201ENST00000361367 TMEM191AQ9H0A3 160 aa11.29□□□□□ -0.6
CTR9-201ENST00000361367 IGHV2-70DA0A0C4DH43 119 aa11.29□□□□□ -0.6
CTR9-201ENST00000361367 GGCTO75223 188 aaKnown RBP11.29□□□□□ -0.6
CTR9-201ENST00000361367 SRD5A1P18405 259 aa11.29□□□□□ -0.6
CTR9-201ENST00000361367 DLX1P56177 255 aa11.29□□□□□ -0.6
CTR9-201ENST00000361367 Q6ZRM9 215 aa11.29□□□□□ -0.6
CTR9-201ENST00000361367 SLC50A1Q9BRV3 221 aa11.29□□□□□ -0.6
CTR9-201ENST00000361367 A0A1B0GWJ7 208 aa11.29□□□□□ -0.6
CTR9-201ENST00000361367 TRGC2P03986 189 aa11.29□□□□□ -0.6
CTR9-201ENST00000361367 F11RQ9Y624 299 aaKnown RBP11.29□□□□□ -0.6
CTR9-201ENST00000361367 CXorf65A6NEN9 183 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 TDGF1P3P51864 188 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 C19orf35Q6ZS72 473 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 ZNF329Q86UD4 541 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 MAP1LC3CQ9BXW4 147 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 SONP18583 2426 aaKnown RBP11.28□□□□□ -0.6
CTR9-201ENST00000361367 CENPFP49454 3210 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 CCKARP32238 428 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 C17orf58Q2M2W7 97 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 FAM74A4Q5TZK3 123 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 Q8NA96 180 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 MYOZ3Q8TDC0 251 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 TRGC1P0CF51 173 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 PSG1P11464 419 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 ADORA2A-AS1P86434 159 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 NEU1Q99519 415 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 IGHV1-69DA0A0B4J2H0 117 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 IGHV1-69P01742 117 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 OTORQ9NRC9 128 aa11.28□□□□□ -0.6
CTR9-201ENST00000361367 AREGP15514 252 aa11.27□□□□□ -0.6
CTR9-201ENST00000361367 NSUN5P1Q3KNT7 163 aa11.27□□□□□ -0.6
CTR9-201ENST00000361367 LDLRAD2Q5SZI1 272 aa11.27□□□□□ -0.6
CTR9-201ENST00000361367 FAM53AQ6NSI3 398 aaPredicted RBP11.27□□□□□ -0.6
CTR9-201ENST00000361367 OR8A1Q8NGG7 326 aa11.27□□□□□ -0.6
CTR9-201ENST00000361367 KAAG1Q9UBP8 84 aa11.27□□□□□ -0.61
CTR9-201ENST00000361367 KIR3DL3Q8N743 410 aa11.27□□□□□ -0.61
CTR9-201ENST00000361367 PACRGQ96M98 296 aaPredicted RBP11.27□□□□□ -0.61
CTR9-201ENST00000361367 TGIF2-C20orf24A0A0A6YYL0 155 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 C9JCJ5 164 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 G0S2P27469 103 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 FMC1Q96HJ9 113 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 HSPB8Q9UJY1 196 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 TAS2R60P59551 318 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 TMEM183BQ1AE95 376 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 MRPL18Q9H0U6 180 aaKnown RBP11.26□□□□□ -0.61
CTR9-201ENST00000361367 PTPRSQ13332 1948 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 ZNF106Q9H2Y7 1883 aaKnown RBP11.26□□□□□ -0.61
CTR9-201ENST00000361367 A0A1W2PRE2 83 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 PLA2G5P39877 138 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 HNRNPA3P51991 378 aaKnown RBP11.26□□□□□ -0.61
CTR9-201ENST00000361367 TEX38Q6PEX7 206 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 ANAPC10Q9UM13 185 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 MYO18BQ8IUG5 2567 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 NPIPB6E9PJ23 425 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 CR1LQ2VPA4 569 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 SPSB3Q6PJ21 355 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 ZNF841Q6ZN19 808 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 VSIRQ9H7M9 311 aa11.26□□□□□ -0.61
CTR9-201ENST00000361367 MMP23AO75900 390 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 GNG5P63218 68 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 ZNF562Q6V9R5 426 aa11.25□□□□□ -0.61
CTR9-201ENST00000361367 C10orf142B7Z368 130 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms